Array 1 640449-638907 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE150242.1 Capnocytophaga granulosa ATCC 51502 acFDk-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================= =============================== ================== 640448 45 88.9 30 ..........AT...T.......C.........G........... TTTTGCACTGTCAAAATTAAACAAGAATAT 640373 45 100.0 30 ............................................. AAGGTTACTTTTCAAGATGAGTTTGGAAAT 640298 45 97.8 30 .....................................T....... CTATCTGAGATGAAGGATAAGTACTTAGCC 640223 45 100.0 29 ............................................. AGATAGGGAGGAGGATATAAAAAAGTTAT 640149 45 100.0 30 ............................................. GAGATGAAAACAGCCATCATTACCAATCCT 640074 45 100.0 29 ............................................. TTCATCGGAAAGAGGGTACAGCGGAGCGC 640000 45 100.0 30 ............................................. CAACGTAAATATGAACTAAGAGCCTTTGCC 639925 45 100.0 30 ............................................. CGATAGTCAAGGACATGAACGGGCAGATAA 639850 45 100.0 30 ............................................. CAAGTTTCTGAGTAAATCGACGACCTGAGC 639775 45 97.8 30 .....................T....................... CCAAGAAGCAAACAACACAACGTGGCGGCC 639700 45 100.0 30 ............................................. CATGCTGATTTATCATTGACCAAGAACAAC 639625 45 100.0 31 ............................................. AGTGGATGGGGAGCGCCTGATCCTACACAGC 639549 45 100.0 29 ............................................. TTTTCCTCATCCGAACCTTCCCAAACTGC 639475 45 97.8 30 .....................T....................... GGAAAAGGAACTGAAGGAGAAAGAGGAGGG 639400 45 97.8 30 .....................T....................... TGTATAAAAAACTCGCTTTCGAGAATCACC 639325 45 97.8 30 .....................T....................... TCCACAGCCTGCCCTTTGTCGTTGAGTAGG 639250 45 97.8 30 .....................T....................... CCAATTATGGCACTAACATCAATACATTTT 639175 45 95.6 30 .....................T.....................C. CCCCCCACTTTCGGTGGCTATCTTGACAAT 639100 45 97.8 30 .....................T....................... GCCCGCTTGGTTGGCTTCGTTCTTAGCAAA 639025 45 97.8 29 .....................T....................... TGATATAGATATTTATGTAGCACAAAACA 638951 45 97.8 0 .....................T....................... | ========== ====== ====== ====== ============================================= =============================== ================== 21 45 98.3 30 GTTGTGAGTTGCTTTCAAATTCGTAACTTTGTGACCTCAAACAAC # Left flank : CCGCTGGCAAATCACATGATGTGAGAGTTGGTGTTGCGTAAGCAGGCGCAGCTTGTTTTTCACTCTTCACTTTTTGTTTTTCATCTCTTTGCAGCCATCCTTCTAAACGCATAATAAGGCGAATAGCTGCGATGCTTTGGCTAATGGTGGCCACTATAGTCTTCCCATTGCTCTCTATCGGCTCACGACGAGCGTATGTCCAAAGTATATCTAAAGCCTCTTCCATAATGATTAATGATTAATGCCACTAATGGTTAATGGCTGACCACTGACTACTGAAAAACGAGGCAAAGTTACAACAATTCAGGTGTCGAAGTCAAGGGGAAGGCTTATGAGAAGTAAGAATTTATACAATAAAAAAATATGTTAAGTACTTAACAGAAGTTAGTGGTCAGAGGTCAGTCTATAGTGACTAACCTCTTATTCGTTATGCTGTTACATCTAAATATGTTAATTGTATATTAAAATCAACTTGTAAAACATGAATTAGTATAAGTATT # Right flank : CTCAATCTTTTTAAAGAGATTGATTGTCTGTAGGTTATTCAAAAGTTCAAAAAGAGAAAACCTTCTTTTCTATTCTATCTTAGGAATAAAAAGGAAGGTTTTTCGTTTTCTAAAATTTAAAAAAGAGTGAGCTGAATACAATCTTTAGGAGGATCTTTCTTTGATTGACAATAGAAGATCTCTATTCCTTCAAATTGCTTGTCGGTGATAGTAAATATGGCTACTTTTCCAAACTCAGGGAGCCATTGCTTGACACGGTTGATATGTACCTCGGCATTCTCCTTGCCAAGGGTAAGTGCCATTCATCACAGCTGATAAGGATCACATTGTTTTTCATCAGTTCCTGTATCAGCTGGTGAGAGAGGGTGATTTGGTAATGGTCAAGCATCAGTAGTCCTATATCTTCTATAGGGACACTGCCTTTTTCTTCTTTGGTTTCTGGGTCGGTAACCTTTAATTGTTTGTCTTTCAGCTTCAAATAAGCAGGGTTACCTATATAA # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAGTTGCTTTCAAATTCGTAACTTTGTGACCTCAAACAAC # Alternate repeat : GTTGTGAGTTGCTTTCAAATTTGTAACTTTGTGACCTCAAACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.22%AT] # Reference repeat match prediction: R [matched GTTGTGAGTTGCTTTCAAATTCGTAACTTTGTGACCTCAAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.50,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //