Array 1 54909-55188 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CYTQ01000016.1 Achromobacter xylosoxidans strain 2789STDY5663426, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                                                                                    	Insertion/Deletion
==========	======	======	======	=============================	===================================================================================================	==================
     54909	    29	 100.0	    32	.............................	ATGAACCGCACAGAAATTGCGGCCATCTACGA                                                                   	
     54970	    29	  96.6	    32	.......T.....................	ATCGCGTCGGCCGGGATGATGCAGTGCTGGGC                                                                   	
     55031	    29	  93.1	    99	.........C..C................	AAGTATTGACCGTCATAGCAGGTCGTGCCGCAGTATTCCCAGTAGTGCGGGCAGGGATGAACCCCTGCGCGCCCCCCCTGTAGCCGATGAGCGGGCGGC	C [55035]
     55160	    29	  93.1	     0	........T........A...........	|                                                                                                  	
==========	======	======	======	=============================	===================================================================================================	==================
         4	    29	  95.7	    55	GTGTTCCCCGCGTGAGCGGGGATGAACCG	                                                                                                   	       

# Left flank :   AGGACCGCGGGGCGTTTTACACCGCCGAAAAAAACATGCTAGAATTCGGCCTCTTTGCAGTTGAACACGAACACGAAATTGCTGGTGTCAGCGATTTGGTGTCAACGCAGGAAAATGTGGTGGCTGTAGCTCAGTTGGTAGAGTCCCGGATTGTGATTCCGGTTGTCGTGGGTTCGAGTCCCATCAGCCACCCCAAAGAATTCCTTTACATTACAGGCACTTAGGTGCCTGTTTTGTTTTCTCGGGGAACATTCGGGGTAATTGCGGACTCCAGGCGCGCCATTTCTAGATCGTCGTGGGCGCCGTCCAGCCACTTGGCATAGGTGGTCAGAAACACCTGAATGCTATGCCCCATCTGCTTGGCGCAGAACGCCGGGCGCATCCCAGCCATCAGCATCATCGTCGCATAGGTGTGACGGATGTTGTACGGGCGCCTATATCGGATGCCCAAGATCTTCAAGGCTGGTGACCAATAGCTGCGGCGGAACGCCCGTTCATCC
# Right flank :  GGCCCTTAGGGCTTCGAATCCACAGCTGCCTTCTTTGGGGCAGTTGACGAAGCGCAAGGCCGCGTAGCGGCCTGACGAATCTCGGCGGATCCCATACGGATGCAGCGACCCCGTTGATTTATCTTGGCTTGCCACGCAGCCGGTCCATCGCGAACAGGCCCGTCAACCCGCCAACGCGCCTTCCCCATTCATCCCTTGCCGGACACTGAGGTCTTTGGCCCACCGTGGCAAGCGGCCGGGCAGGCCATAGCTGTCATTCCCGCCCGTTCCCCGAATACGTCCCAGGGCGGCGCATACGACTGGTAACCACCGCTGGAGCCTTGTTTCAGTGCGCCGAAATACACTGGGCGCACTTTGGACTCCGCGTTTTTGACATGAAAATTCTCTGTAGCCTGGCCCTGGTCGCTTCCTTGCTCGGCGGGTGCGCCGTATATACCCCGGACGGCGCCGTGATCGTCGATCCTCACCGTGGCGGTGGCGGCGGCGGTTTCTGCCCGCCG

# Questionable array : NO	 Score: 2.79
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:-2.54, 8:0.6, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGTGAGCGGGGATGAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [40.0-40.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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