Array 1 76362-74685 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGJTM010000001.1 Bombella apis strain MRM1 scf7180000005233, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 76361 29 100.0 32 ............................. TCGTTGCGGCACTGAAGAATCAGGTTACCCTA 76300 29 100.0 32 ............................. GCATCCCACGTTGCCCTGTTGGCATGAGGCGG 76239 29 100.0 32 ............................. CTAGCCGACCTTGCCCCTGATCCAAAAGAAAG 76178 29 100.0 32 ............................. TAGGTTTTGCCATCCGGGGCCAGGGTCGGGAC 76117 29 100.0 32 ............................. TACATCCCCACAGTGGACTCTCATTACGGCAA 76056 29 100.0 32 ............................. AGCCAGAACCCACTTCGCTTCGGTTTCACCTT 75995 29 100.0 32 ............................. CTGTTATCACCACCGTGGACGTGGACCTCCAG 75934 29 100.0 32 ............................. CATGCAGGTACTGGGAGACGCTGGAAGTGGGG 75873 29 100.0 32 ............................. CTGACTTTCCCATCGTCAGACCATTCCGGCTG 75812 29 100.0 32 ............................. GCGATAGCACGACAGTGACCCCGGAGGGCTAC 75751 29 100.0 32 ............................. GACACGCCTGATCAGATCTGCGATAGACCGCC 75690 29 100.0 32 ............................. ATCATCGGCTTCATCGGGTTCTGTGTGTTGAA 75629 29 100.0 32 ............................. TCGCCATTCAGAACACTGGCTGCCGGGGAGTT 75568 29 100.0 32 ............................. AGCGGGCCGCCAGAGACCGGGAGAACCAGCGG 75507 29 100.0 32 ............................. TACGACTTCATATTTTAATTTTTCCATTGACT 75446 29 100.0 32 ............................. TTTGCATATATCATGCACATATGAGCAAAATC 75385 29 100.0 32 ............................. GCGAGCGAGGCCGAGCCATCAGGGAAAATCGG 75324 29 100.0 32 ............................. CCGCCCATGCTCTCCCGCTCGTATTCCTCGTC 75263 29 100.0 32 ............................. CGGGGCGGTGGCGTGACCTCGCACTGGCGACT 75202 29 100.0 32 ............................. GGGGTCAAATTTCGGCTCCCGGGCGTCAAAAA 75141 29 100.0 32 ............................. ACAGGTCCTTACAAATAACCTTGTTCACGATA 75080 29 100.0 32 ............................. AAACAGCCCCCAGCCCCGCCTCCACCTCAAAA 75019 29 100.0 32 ............................. GGGGCAGAGTTGGGTCTGGCCCCCATGCAGAG 74958 29 100.0 32 ............................. AGGCTGACCGCATTGCCTGCTCCCGTGCCGAA 74897 29 100.0 32 ............................. TTGTGCAGGGACGGCTCGAGGTCTGAAAAGAC 74836 29 100.0 32 ............................. CGGCGATCAGGTACCGGGATCGTGACGAAAGA 74775 29 100.0 32 ............................. GTGCGTAGTGTCTGACTGTTTCACGATAGATG 74714 29 93.1 0 ......................CA..... | T [74687] ========== ====== ====== ====== ============================= ================================ ================== 28 29 99.8 32 CTGTTCCCCGCCTACGCGGGGATGAACCG # Left flank : TCGTGTACTGCATGGCCCTCCTGCTGGAGCTGCTGCGGGGCAGGAATGAAAAAGGCGAGAAAATTGCGCTTCAGGAGCCGTTCCTGACGGCAGAACAGTTGAACATTGCTGCTTCTGATGATTTTGAGGCTTCCATCGGTCTGCCTGCTTTCGACAGCTGGCGTGATCTTCTGACTCCAGAGATTAAGCAGGAGATTGTGCGTGATCGGGAGCTGATCCGTCAGAAGGGTGTTCTGGCCAGCCTGCCCGTGTGATGAGGCGATGAGCCGTTGAAAATTGATTGTGTGTAGAGAAAGGGAGGCTCCGGCCTCCCTTTTTCATGTTTGCTGTCAATCTTGTGGATAAAATTTTCTGGAGTGGTTTTTGGCTGTTCAGCGTCTCAACTTTCTTCTGTAAGGGCCGGAGAGGACTTGCCTCGGCGAGGTCATTAAAATTATATTTAATTCGGTAAGTTCTTTGACAATTAAAAAAGACTTATAATACAAATTGTTACATGAAGT # Right flank : GTGCCAGACCGCCATCACTGGCCTGTACCGAACTGTTCGCCGGTGGGTCATGGGGTGGTTGGTGGCATATGTGGTCGCCAGAGCCATTCCAGAGCTTCGGGAAGGGTCTGTTCGATGGTGGGGCCATCCACATGCCGGGCATTGCGGGCAAAGACAAATTGGTAATCATAGCCCTTGTCGGCCAGCACGCGGGCCATGTTTTCCCCAGCCAGCACCCAGTCATGCATGCCATCAGGCATGGACGGAACGGGGTAGAACAGGTCCTGGTCGCCTACTTCGTACCAGATGTGCAGCGGGGCCAGTGGTGCCGCCGGGATGAGCGCCGCACCGGGATGGGGTGGTACGGCTTCCGGTGTTCCGGCCCATGGGGAGTGAAGCTGCCATCCCCCGCCGGGCAGGGCGGGGTCGTGCGGCCATTGCTGGTTGACCAGCGAAGGAGAGTAGGCCAGCACCCGGTGATAGAGGTTGGGCCGGAACCAGGCCATGGCAAAGGCCGCTGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCCTACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCCTACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //