Array 1 89349-87217 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRUM01000006.1 Streptococcus salivarius strain AF24-6AC AF24-6AC.Scaf6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 89348 36 100.0 35 .................................... GTAGTACCCCTCTTTTTCTTCGGCATGAGTTTTCT 89277 36 100.0 36 .................................... AGCCCCAAGCTGATTTTATTGTTTGTGTTTGTCATT 89205 36 100.0 33 .................................... ATTTTATTAGTTATTGATATTCTTTTATATTCT 89136 36 100.0 37 .................................... TTTGCCCAGGTCCTCAATATGAGACAATTGTGCTTTC 89063 36 97.2 38 .............C...................... AGAGCATCTTTAGTGAGTGTAATGAGTTGCTTGTTAGC 88989 36 88.9 38 ............CA...........A......T... TAAAACTTGTCGCCATCGATACGTTTGTTAATGACCTT 88915 36 88.9 36 .........A...A.......CA............. TTCATTATTATTGCACTAATAATCCACATACCTTGA 88843 36 97.2 36 .......G............................ AGATTCTTTCTTTAAATCAGAAATGAAATCATCTAC 88771 35 94.4 38 .....................C.....-........ GGAGTCGAGATCACAACATCACTTGGCTTAGTGTGATC 88698 36 88.9 36 ........A....C.......C..........T... TCGTTGTACACCTCATCTCCAACTGGCTGTCGTTGT 88626 36 94.4 38 ..............C.................T... TCATATCTACTCCTGAGTGTTCAATTTCTTCTTCGTCT 88552 36 100.0 38 .................................... CGTCCAAATCGATTATCAATCTTCATCATTTTAGGTTG 88478 36 91.7 35 ....................A....A......T... AATGATGACGCTACTAACCATCCAATCAATACCAT 88407 36 86.1 37 .T.....G.....C..T....G.............. CTATTTGAATCTGTTTCTAGTTTTCCATTCAATGAAG 88334 36 94.4 39 .............A.......C.............. AGTTTTATAGGCATAGATATATGATCGTCTGTTTTGACC 88259 36 86.1 38 A............A.G.....C...A.......... ACATATAAGATAATAGCTCTTAATAATTGCCTTTGTTT 88185 36 94.4 36 .............CC..................... TAAAATACTGACACGCCTTGTTCTTCCCAACTAGAA 88113 36 94.4 35 ..............C......C.............. ACCTCAAATTCAGCATTACGTTTCATAATTTTCCT 88042 36 94.4 37 .............CC..................... AATCTTCTGAAAGTACCTTTGTTATACTTATAAGTTT 87969 36 91.7 36 .............A...T..............T... GCGACAACATAGCTACTCATGGCAGTTTCCTCTTTT 87897 36 94.4 34 .............A........A............. GCGATTGCTGAAAGTGTTGTAATTTTAGATGTTT 87827 36 97.2 36 ...........G........................ CTATCCCGCCAAAAATCAAGCATGTCTGCGACTTCT 87755 35 91.7 36 .................-...G.........T.... GATCAAATGATGCTGTCAAAATATCTGACTGAGTGA 87684 36 91.7 34 .............C..........A.......T... TGTTGTATTCATCACGATAATCATTGAAACCATC 87614 36 94.4 38 .............G.......C.............. CACTAATAAACGCTTCTTGTCGTTTGAGCTCTTCGGCT 87540 36 88.9 39 .............CC......C.............T TCATAGCTTCATAAACCGTCCACCAGAATTTATCAGTTT 87465 36 100.0 37 .................................... TCAGTATTAGTGAAAGATATACTTCATTCAGTTACGC 87392 35 91.7 35 ...........................-....T..T ACTCTTTTATTTTTTACGGTATACATAATTTTCCT 87322 35 80.6 35 ....C...G....C-......CA.........T... CATACGGAGCTACCTGACGACCCTCAGCATAATCT 87252 36 80.6 0 .............A................TTTTTT | ========== ====== ====== ====== ==================================== ======================================= ================== 30 36 93.1 36 GATATAAACCTATTTACCTCGAGAGGGGACGGAAAC # Left flank : AGAGTTTGATTAGGGCTTTTAGAGAACTCGACCCCAGTCTTTATGAGACAAGTTACACAGGAGGGCATTAATGGGACTTTACTTTAATCTCAGTGAAGAAGAACGTGAGTTTGCGAGACAAAGAACCATGTTTTGTCTGATTATTTATGATATCCGGAGTAACAAACGTAGACTTAAACTGTCTAAATTACTTGAAGGTTATGGCGTGAGGGTGCAAAAATCCTGTTTCGAGGTCGACCTGTCAAGAAATGACTATCAGTCTCTCCTTAAGGATATCGAGAGCTTCTACAAGGCCGATGAAGAAGACAGCATAATCGTATATGTGACAACCAAAGAAGAGGTGACTAGTTTTAGTCCCTACCATAGTGCCGAAAAATTAGATGACATTCTCTTCTTCTAAGCCTTTATAGGCCTGCAATCATATGGTACAATATAGATAGTGTTTCCAGTAGGTCCTACATCTTGTGTCTCAAACAACTGTCTAGAGCACAAGATATGGG # Right flank : GAAAATTTTGAAAATAGTCTTGACACCGCTTCCAGAAAGTGTTAGACTAAAAGCACATTAAGGGCGCCCCAATGAGGTGAAAAGTACTTTCAGCTTTTGGGGTTTTTTCATACAAAGATGAAGGAGTCGAATGAAAAAATTAGTATTTACTTTTAAAAGGATCGACCATCCTGCACAAGATTTGGCTGTAAAATTTCATGGCTTCTTGATGGAGCAATTGGATAGTGACTATGTTGATTATCTGCATCAGCAGCAAACAAATCCCTATGCGACCAAGGTAATCCAAGGGAAAGAAAACACGCAGTGGGTCGTACATCTGCTCACAGATGACCTCGAGGATAAAGTTTTTATGACCTTATTACAGATTAAAGAGGTGTCCTTAAACGACCTGCCTAAGCTCAGTGTCGAAAAAGTTGAGATTCAGGAGTTGGGAGCAGATAAACTCTTAGAGATTTTCAATAGTGAGGACAATCAAACCTATTTTTCAATCATTTTTGAGA # Questionable array : NO Score: 5.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.27, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATATAAACCTATTTACCTCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [32-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //