Array 1 2485-16 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVBA01000161.1 Corynebacterium striatum strain 587_CAUR 911_2498_34961, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2484 29 100.0 32 ............................. GACCTCAAAAAAGGAGATACAAAAGTGACTAA 2423 29 100.0 32 ............................. CTCAGCGGTAAAAAGGTGCGAGGTATCAGCCC 2362 29 96.6 32 ............................T TTCGCCGAAGAGCTGGCGGGGATTACTGATCC 2301 29 100.0 32 ............................. CTCGCGATGTCGACGGTGGCGGCGTTGCGTCC 2240 29 96.6 32 ............................T CGCTGCCAGCGTCGGCGACAGCCCGAATGCGA 2179 29 100.0 32 ............................. TTCCCGTATGACCACGTCCTCAACCTCGCTAA 2118 29 100.0 32 ............................. AGTGGCGAGAGCGGATGATCCGCCTCCACCTT 2057 29 96.6 32 ............................G AAGACGTTTGCTCAGGCGACGTCGTAGAACTG 1996 29 100.0 32 ............................. TATGCCGCGCACTAGGCGACGCCCTCACAATG 1935 29 100.0 32 ............................. CAGCTGCATCGCAGGAGCAATAGAATCAAAAA 1874 29 100.0 32 ............................. CCCGCTACCCGCGCCGACGAGCTAGACGAGCT 1813 29 96.6 32 ............................G TAGAGCGCGTTAAGAAGCTAAACCGAATCAGC 1752 29 96.6 32 ............................T GAAATCAACGATCGTCTTGACGATATTGACGG 1691 29 100.0 32 ............................. CTAAAACGCCTTCTGGCTGAGGCCACACCCGG 1630 29 100.0 32 ............................. CATTACTTATCGACTGGAAGGAGGTGAAAGTC 1569 29 100.0 32 ............................. ATTTTTGTCAGCTTTAGCACTAGCCTCGGAAA 1508 29 100.0 32 ............................. GACGCCGTTGGCGTACTTCGGGTCAAGCTTCC 1447 29 100.0 32 ............................. AGCCCCTTCTCGCTAAACACCGGCACCGACAA 1386 29 100.0 32 ............................. TGTTTTACCGGCTTTAGTTCTGCGTTTCTGGA 1325 29 100.0 32 ............................. GTTGACGATTCCGGCACTTAATGCGGCTGACG 1264 29 100.0 32 ............................. AATGTTTGCAACCCGGGTTGACACCGCAACCG 1203 29 100.0 32 ............................. AAATTCGTGACTATCCCGGTTCCCGGAACTTC 1142 29 100.0 32 ............................. TGAACCGGGGCCTTGGTCTTTTCCTTGATGCC 1081 29 96.6 32 ............................G TCGGTGAAAAATTTAGTGGTCATGTCTTCTTC 1020 29 100.0 32 ............................. CCCATATGACGAATACGGCCCCGAATGGCACG 959 29 100.0 32 ............................. CCAGCAGCCGCATCCCTAGAATCTTTAGCCGC 898 29 100.0 32 ............................. AGCACGTGGGTAGTTAGATGGCGGCGCGACAA 837 29 100.0 32 ............................. CGGGATGGCATATAATGGGGTTGTAAGCAAGA 776 29 100.0 32 ............................. ACCAACCCGGAAAACACCAGCCAGGCGCAGGA 715 29 100.0 32 ............................. GGCTCCGGCAAAGTCATGAGCGGCTCGCCGTC 654 29 100.0 32 ............................. ATGGGGGTGGTATGGGGGCGAATGGGGAGACT 593 29 100.0 32 ............................. CGTCCCGCAGGTCTTCAAAGCCTTGGACACAA 532 29 100.0 32 ............................. GCGACCAGATGCGGGACACCCTCAACCAGTAT 471 29 100.0 32 ............................. AATCCAGCGCCTCGATAGGGAAGTGGCTGAGC 410 29 96.6 32 ............................T CATGCCCAAAGGAGGGAAAGTTATGACAACGA 349 29 100.0 32 ............................. CACAACCCCCTGAACACTAGTACGCACATCAC 288 29 100.0 32 ............................. GGTCGCTAGATCAATTTCGATTGTGCGCATTG 227 29 100.0 32 ............................. CGGTTCAGCTATGCGGTTGATGCCGGGTACTG 166 29 100.0 32 ............................. CCACTCAATCCCGGCCTTAAACTTCTCAACGG 105 29 96.6 32 ............................G GGAAAGCCCCTAAGAAAGGAAAAGAAAATGAC 44 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 41 29 99.3 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : GAACACCCACAAT # Right flank : CCCCACCACCTCAGGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [6.7-11.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.24 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 17-898 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVBA01000011.1 Corynebacterium striatum strain 587_CAUR 91_913_10825, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 17 29 96.6 32 ............................G CTCGGGATTGATGTTGATTGGCCGGATGGCAG 78 29 100.0 32 ............................. ATCCGAGACGAACGCGGGAAAATCCGCGACCA 139 29 100.0 32 ............................. ACACCACGCTTGGGCTCGGAATCATCATCAGC 200 29 96.6 32 ............................G GACAACGCTGTAATTACCGCACCCTACAGGGG 261 29 100.0 32 ............................. AGCAGGAAATCAAGGACGCCGTATTCGATCTC 322 29 100.0 32 ............................. GCAAAGCACGGAATGGACACCACGGCCGCTGA 383 29 100.0 32 ............................. GAGGGCGCAAACAACAACGTTGTCATCCCATT 444 29 100.0 32 ............................. GATAATGCGGCGTGCGCGGGCGAGGGAAGGCA 505 29 100.0 32 ............................. AAACGCCTACGCACAGAGCTAGCGAGACTGCA 566 29 100.0 32 ............................. TTATACCGGGGCCACATTGATGGCTATGAGCT 627 29 100.0 32 ............................. CGCCATAAACCGCCCTATACCGCCTTATTGCA 688 29 100.0 32 ............................. ACAGACCCGCACCTCGCCGCCCTCGCCCCACC 749 29 96.6 31 ............................T TCCATTCTGGCTAAATAAGTGGGGATACCCG 809 29 100.0 32 ............................. GCATCATCTCCAGATCGACGCCGGGGAACCAC 870 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 15 29 99.3 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : CGGCAGGGCTGCTTTTG # Right flank : GGGACGCCCGCTACG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [10.0-5.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 17-350 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVBA01000055.1 Corynebacterium striatum strain 587_CAUR 348_365_4596, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 17 29 100.0 32 ............................. ATCATTTTTGGCTATGCAGCGCCGGATGTCGG 78 29 100.0 32 ............................. TACGGCTCCTTCCCCAAAGGATTGACGTGAAA 139 29 100.0 32 ............................. ACTTTTGGTGGCGCTGCTGCTGAGATGACAGC 200 29 100.0 32 ............................. ATGACTAACATTAATCCCTGTCGCGCTTCGCG 261 29 96.6 32 ............................G TGTCACTGTGCCCTATGAAAGTCTGTGGGCTA 322 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : ATGGACACGACATTACG # Right flank : TCACGCAGGACGATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [15.0-11.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 561-105 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVBA01000071.1 Corynebacterium striatum strain 587_CAUR 426_574_7838, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 560 29 100.0 32 ............................. GGACAGGCTGTGTACTTCGTTTAATTCCTAAA 499 29 100.0 32 ............................. CCAGACTGAACCGCCCCCACAGTCAGACCCGA 438 29 100.0 32 ............................. CACGTTCACGTGGCATCACAGCAGCCATTGGG 377 29 100.0 32 ............................. CCACCCTCAAATGTGGCAGTGGGTAGCAGGAG 316 29 100.0 32 ............................. CCTTAAGGACTTCGAGAACGCGCCAGAGGGCA 255 29 100.0 32 ............................. ATACACCGCCCTAGTGGACTTCCTCACCAATC 194 29 100.0 32 ............................. CATAGCAGTCCCTCATTTCAATATCGGCCAGC 133 29 96.6 0 ...........................G. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 99.6 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : GAACACCCACAAT # Right flank : CTTCCATTCTGCTGTGGAAGGTACAGAAAGAAAGTCTGACCTGTGAAACGTGGGGATAAGACTCTTCCGGTTTTAGGGTGCATTGATTAGTTCGCCGGGGGTTCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 52-1117 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVBA01000081.1 Corynebacterium striatum strain 587_CAUR 478_1132_15329, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 52 29 100.0 32 ............................. TTGCATAACCAGCACTATAGGCGCTATAGTAA 113 29 96.6 32 ............................G TAGGCGGTAACTATCTTGTCTACGAAATCGAC 174 29 100.0 32 ............................. TCGAGTTGTAAAGAATGTTTTAGGCATGGCGA 235 29 100.0 32 ............................. CAGAAACATCATCCAAAGTCATTTCCGCGACC 296 29 100.0 32 ............................. GGGGGCGTCCCATAGTGACTGGCGGCCCCATG 357 29 100.0 32 ............................. ACGCCCGCACTCATGCGCGCCAGCATGGAAAT 418 29 100.0 32 ............................. GTTCCGGCTCTCCACGGTATCCACCAGTCTTA 479 29 96.6 32 ............................T GACGCCCGGCGACATCGTAAAATTCAACGGCG 540 29 100.0 32 ............................. GGCCGCATTGTGCGCTCCACACACAAGGGCCT 601 29 100.0 32 ............................. CACTCGACATTGTTGTATGCCCAGATTAGGGC 662 29 100.0 32 ............................. ATCATTGAGCCAGCCACGACTGAAGTAAGATT 723 29 100.0 32 ............................. GTGCGGCCAAAAAGGTCATAGTCGATTGGCAG 784 29 96.6 32 ............................G CCCACGGCATGACCGCAGCAGAGTACAAGCAA 845 29 96.6 32 ............................G AAAGAGACCGGCACAAAGCCAGTCCAAACCGG 906 29 100.0 32 ............................. ATATCACGCACAGCATCATGTGAGCGCAGATT 967 29 100.0 32 ............................. TCGTCACCGTTGAGGACTTCGAGGGCGCGCCA 1028 29 100.0 32 ............................. CACCGGCGGATAAGCTCAAAATCATCGGGTAG 1089 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 18 29 99.2 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : CGTAAGCGGGGATGAGCCCTCACGCAGGACGATTTCGATTTCCTCCAGGGCG # Right flank : CCCACCACCTCAGGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [33.3-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 201-50 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVBA01000089.1 Corynebacterium striatum strain 587_CAUR 536_60255_1001452, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 200 29 100.0 32 ............................. TCGCGCCAGTGGCATTGTTCACATACGACGAC 139 29 100.0 32 ............................. TCCGGCAGTTCATTACGCAAAACATCCATCGG 78 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : GTGGACAATAGCGCCGAGTCAATCGATGTAGAGCTGCTTTTGTGGAACGAACTTGAAAATATTGCGGCTGGTACTAATTGGTCAGACTTTGATCGGAGTTCTCCATGATGGTGCTCGTCGTTACTGCATGTCCCGCCGGCCTGCGCGGTGACCTTACTAAGTGGTTACTTGAGATTTCACCTGGGGTGTTTGTGGGTCGTCCATCAGGGCGCATTCGTGATCTGTTGTGGGAACGTTGCGTAAGTTTGTGCAAAGATGGCCGCGCTATTTTGGTTTTTAGCTCCGATAATGAGCAGGGGTTGGATTTTCGCGTTCATCGCCATGAGTGGGAGCCTGTGGATTTTGATGGTGTCACCCTCATGCGAAGAACCACTGCGCCATCAAAAGCTCAACGCCGTACCGGCTGGAGTGCTGCCCGAAATGCTCGCCGACACTGACCGTTACACCATAAGTCGGATCTGCTAGCCTCGTTTTTGGCTCTTCCACGCTGGTCAGTAAGT # Right flank : CCTCCGCCACCACAGAAAGGAACACCCACAATGGTCCGCCCCGCGTAAGC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [30.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //