Array 1 85552-87713 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOOF01000003.1 Microbispora siamensis strain NBRC 104113 sequence003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 85552 37 75.7 34 CC.C.T.....TG...AAC.................. ATGCTGGGCTCGGACTGGGCAGGGGGCAAATGGC G [85577] 85624 37 86.5 39 .C....................AT..A..A....... TCCACGAGCCTGCCGTATCAGAACTCCTGGGACCGAGTG 85700 37 91.9 37 ................A.....A......A....... TTGTGGACCTGGATGTAGTGACCGATCTCCACAATCG 85774 37 78.4 36 .C.......A..T..T...........A.A.....CA TCTCTGTGCGGGCCTGCTCCTGCGGGCCAGCACGGC 85847 37 97.3 36 .............................A....... TTGGTGTAGGTCGGCGTGCCGGTGTACACGTGCCGC 85920 37 97.3 36 .............................A....... GTGGGTGCCTTGGCCCGGTTAAACGCCGGCGACCGG 85993 37 97.3 34 ...........T......................... GGCGACGGCGTGTCCGAGGACACCAAGAGCCTGG 86064 37 94.6 36 ..............T.........T............ CATGCCGGGTCGAGTGCCACGACCGGGTCGGCTGGC 86137 37 100.0 38 ..................................... CCCAACACTGGGGCCCAGGGCGTGGCCCAACTGTCCGG 86212 37 78.4 34 .......C.A....AT......A.G...A....T... CGCTCGGCGTCCTTTACGCGGCGGGTCGCGGACG 86283 37 100.0 36 ..................................... ACCCAGCAGCAGATCCAAGCCGGGTATGCCGGCAAT 86356 37 97.3 37 ............G........................ GAGCAGGGCCGTCGTCCGGCCGCTCTAAACCAGCACG 86430 36 89.2 35 ..A.....G.......-............A....... CTCGACAACCCCGGCGGCACCCGGGCCGCTGCCAC 86501 36 94.6 37 ................-.C.................. TGCGCAAGGCTCTCCGCCGCCCCGCCAGCCCCACCCG 86574 37 94.6 37 ........T................C........... GTGTAGCAGTAGAAGTTCACGCCCGGGCAGGCGTGCA 86648 37 97.3 38 ................A.................... AGGTTCGGCGCGTACGTGTGCCGCCACTTCGGCGCCTG 86723 37 97.3 36 ..................A.................. TTCGTCCGTGGGGATGCGCAACACGATGACACGGGA 86796 37 97.3 37 ................T.................... CGGCGCACCGCGAGGTACCCGAGCTGCCGGTCGGTGG 86870 37 100.0 34 ..................................... TGCGCGAGGCCCTGGGCGAGGAGCAGTACCAGCG 86941 37 94.6 36 ................CA................... GGCGTTGGTGTAGACGAAAAGGTCAGCGGCGCCGCT 87014 37 97.3 38 ......................C.............. TTCTCCGGCCTGTTCACCGACATCCAAGCGTGGGTGAG 87089 37 100.0 38 ..................................... TCCGCGGCCGACCTCAGGTTGATCCTGCGCGGCATCTC 87164 36 94.6 38 ..........-..................A....... TTCCTGGCTGACCACGCGGGCATTTCACCCGCGACCTG 87238 37 100.0 37 ..................................... GTTCCGTGGGAGCAGCTCCCCCGCGTCATACAGTGGC 87312 37 94.6 37 ..............T..............A....... CAATACAGGCCGCCCGGCATCGGCTGAGGCATACCTT 87386 37 97.3 37 ..............T...................... CTCATGGACGGCCTGAACGCCGTCAAGACCCGCCAGG 87460 37 97.3 35 ..................A.................. GCGTACACCTTCCAGCGGTACGCGAACGCCATGCA 87532 37 97.3 36 ................C.................... CTTGAGCGTTGCCCGCAGCGTGTTGCTGCCGCCCGG 87605 37 97.3 34 .........................A........... AACGCGCCCGGCTTGGTGACGTACTGGCCTTTGG 87676 37 91.9 0 .C......................T....A....... | G [87692] ========== ====== ====== ====== ===================================== ======================================= ================== 30 37 94.2 36 GTGGCGGTCGCCCTCCGGGGCGGCCGTGGGTCGCAAC # Left flank : CATGGAATCACCCGGGTCACCCAGACCCGCCAGGAAGACATCGACAAGGGCGAGTCCACCGAGATGGGCAACAAGCACGTCATCCCCTACGGCCTCTACCTCGGGCACGGTCACTTCAGCGCACCCCTGGCCCGCCGCACCGGCGTCACCAGCCAGGACCTGGAGACCTTCTGGCGGGCCATGACCCTCATGTTCGAACACGACCGCGCATCCACCCGCGGCGAGATGGCCATGCGCCGCCTGCTCGTGTTCAGCCACGACGACCCGTTCGGCCGGGCCCCGGCCCACGAGTTGTTCGACCGCGTCCAGGTGGAGCCGAAGAAAGCGACACCACGCGCGTTCACCGACTACACCATCTCGATCGACGACGACGCTCCCGAGGGGGTCACCCTCACGCGCGTCCTCGGATGAACGAGCCGAGTCCGCGGGCCGCAGGCACCGGCCCGCCCAGCTGACCCTGTCGGCACTCGCCACTTAAAAAGTGAGTCAGAGAATTCTTG # Right flank : CATAGGCGTTGGCGACAACACGATGCTGGCGTTATCGAGGAAGGCCGGATTCGCGACCATCTCTTCGTACGAGGCCGCTGGAGAGATTCAATCGTCCGCTCGATCCTCGAACACGAATGGCGACCGGCTGGCACAGGATGACGCCCCTGACGCCAGCCTGAGGAAGTGGTCGAAAGGACGACCAAGCTGATGTTCATAGCGGAACGGCGAGATCCCGCGCCCCTTCGATCTTCCCGCGCCCCCGACCTTCGGGGAACGATGATCGGCACCTGACGACGGGTGCCGGGCACACCAAAGAGCGCCTGTCCGGAAATTTCCGGACAGGCGCCTCCTCGCGATGATCAGTCGTTGAGGTGCTGGCGCAGGTACGACTCGACCTGGTCGAGCGCGACCCGCTGCTGGGCCATGGAGTCCCGCTCGCGGATCGTCACGGCCTGGTCCTCCAGGGTGTCGAAGTCGACCGTGATCGCGAACGGCGTGCCGATCTCGTCCTGGCGGCG # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.22, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTCCGGGGCGGCCGTGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-18.40,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [37-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //