Array 1 226-619 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTVP01000131.1 Aromatoleum bremense strain PbN1 NODE_131_length_2446_cov_20.116, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 226 29 100.0 32 ............................. GGTTTGCCCTCCCCAGCTGACGACGCCCGCGC 287 29 100.0 32 ............................. TTTCCGGTCTTCTGCTCCCGGTCGCGGATGGC 348 29 100.0 32 ............................. CTTCCCGAGCCGCCGCGATCCCCTGCCCGCTC 409 29 100.0 32 ............................. CTTTGCAGTCCCGCGCGATTCGTCCAGGCCCA 470 29 100.0 32 ............................. GTCAGCAGACATTCCCCGTTGCATGTGGGCGT 531 29 100.0 32 ............................. AACGATGGCTGCGTGGTCGCCCGCTCGGCCGA 592 28 93.1 0 ....-.......................G | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.0 32 GTTTCCCCCGCGTCCGCGGGGATAGGCCC # Left flank : TGACAAACGACGTTGCCACGCTTGGCCTCACAAACCCGTTCCGATTTGATCGTGACCGACGATTCCGACATCGTGACCGCCCATTCCGACAACTCGCCGAAATCGGTCACGATCAAATCGGAATCCGCGGTCACGACCCGCGGATTCACCGGTCACACTATTTCGGAATCAGCGGTCACGTTGGGTCGGAATCCGCAGTACTGTTCGGCACCGGGATATTGCCATG # Right flank : GCCCGGTACCGGTCATCGAGTGTCACCGACCGGCACATTGGAGCCACCTCATGACCGGCACATTGAGGTCAGTCCGTGATCGGCATATTGGGGCTGCGCATGGATGAACGCTCGCGGCTCGAATGGATGCAGGATGGCGACGCCGACTTTCGCTCCGCATGGCCTCACACATGGACTGACCTGCGCAGATCGGCAGGCGTTTCGGTAATTGGCTGAACGCCGAACTGGGGCAACCGCTGCCGCGCGGAGATGTCGAGGGGCGTGAGGCGACGTGATGAGCACATTTCCTGAAAGCCAAGGCCTGCTTGTGCTTCCCCGTCTGCGCACGCAGAACGCCAACGCGATCTCCAGCTCCCTCACGCGCGGCTTCCCCCCGCAAGGCTGCCGGGCAGCAAGGGAATTTCCGCTGCGGACGGCGTTCGAATTGCGCGAGGGATGATGCTTCTTCCGAAGCGTCGGCGGGCCATCAATCTCATCGAAGGGCAGCTTCAAGCGGCCGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCCCCGCGTCCGCGGGGATAGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 15757-10236 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTVP01000073.1 Aromatoleum bremense strain PbN1 NODE_73_length_17833_cov_23.1803, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 15756 29 100.0 32 ............................. ACCGAGTAATACCCCGTCGAGTGCTCGCGCCC 15695 29 100.0 32 ............................. AATCCGTCCTTGACTCAGGCACGTGCGACGAC 15634 29 100.0 32 ............................. GCCGGCTGCGATACGCTCATCTCGGTGAACCA 15573 29 100.0 32 ............................. AGGTAGATCGGTCCGCGGGCCGGCGCAGTGCC 15512 29 100.0 32 ............................. GCGATGGTGGGGAGCGCGCGGAGGCGTCGGCG 15451 29 100.0 32 ............................. GATCGGCGGTTGATCGCCGATGAAGGATTCGA 15390 29 100.0 32 ............................. TCATCTCGTCGTACGTCCGGGTCGCCGTGCCG 15329 29 100.0 32 ............................. AAGGCCGGCTTCATCGAAAGCCGCGCCGCGCA 15268 29 100.0 32 ............................. TCGACCTGATGGTCAATATCGTCGCGGACCTG 15207 29 100.0 32 ............................. AACGGTCAAATCGATCCGGGCGGCGGCGAAGG 15146 29 100.0 32 ............................. GCCTGCGGTGCGCTGTACGTCACACGCCGGTC 15085 29 100.0 32 ............................. ACTGCCCTGCGACCTGGTTGGCCTTGTTGATG 15024 29 100.0 32 ............................. GAGGAATGGGCGCTGAAAGCCGGCTGCTTTCC 14963 29 100.0 32 ............................. GCTGCCGGCGATCTCGGCGCGGTAGTTCTCCA 14902 29 100.0 32 ............................. ACCGCCATCCAGGCACCTCCTTGAGCGATCCA 14841 29 100.0 32 ............................. GGTTGGGCGGCGAGCCTGACGAGTGCTCGGGC 14780 29 100.0 32 ............................. GAGGCGCGCGCGCAGACGGCGCTGGATGATGA 14719 29 100.0 32 ............................. GCGATCTGGCTGCAGCGGGCGTGGGGCGTGGA 14658 29 100.0 32 ............................. ATCATCGACAACGCTGGCGCCGAAGTCGGCGA 14597 29 96.6 32 A............................ GTGCGCGGCGGTAACGAATTGCTCCCAGACAG 14536 29 100.0 32 ............................. TTCATCCACTGTTTTTCAACTTTCTATAGGGG 14475 29 100.0 32 ............................. GCCAGATCGTCGATGATCATGCCGGGGGCGAA 14414 29 100.0 32 ............................. TCCCCCAGCCATCTGCCGCCGGGTTTTTCGGG 14353 29 100.0 32 ............................. TTGATATAGGCCACCGCATTGCCGAGCTTCAG 14292 29 100.0 32 ............................. GATCGGCAGGCGCTCGCGCTGGCGGGCTAATC 14231 29 100.0 32 ............................. TGACGGTTGCGCCTGAGATGTGCGCGAAGATC 14170 29 100.0 32 ............................. GGGAAGGTTGGGAAGTAGCAGTGTTTGTGCGG 14109 29 100.0 32 ............................. ACCGCCAGCGTGCCGCCGCGCATCATCGACTG 14048 29 100.0 32 ............................. TCCAGATCCCGACGCAGGTGATCGATCAGCCG 13987 29 100.0 32 ............................. GCCTTATCGCCGACGCATGATCTTGGCCACGT 13926 29 100.0 32 ............................. CTCGGCGCGGTCGCGCTCTTCCTGCCCGTGGA 13865 29 100.0 32 ............................. GCCGAGCAGATGGAAGTGGCGCACCTGGTCGA 13804 29 100.0 32 ............................. ACACGGCGCGTAACGAGCGCGCTTTTGCTCCA 13743 29 100.0 32 ............................. ACCGCCTGGGCCGTCGGCCGCGGCGAAGAGAT 13682 29 100.0 32 ............................. ATCAAGCCGGCGCCTTGCCTCGATCTGGCCGA 13621 29 100.0 32 ............................. CCGTCGCCTATGCCAACGATGCGAACGCCCGC 13560 29 93.1 33 .........................G..A CGCGGCCTCGCGGGACATTCTTGGGACGCTGCC 13498 29 100.0 32 ............................. ATCCCGCATGAACCGTTTCACGGCGAGCGCAT 13437 29 100.0 32 ............................. GAAGAGCAGCGATTGCTCGCGCCGATTCGGCA 13376 29 100.0 32 ............................. ACGCACGGATATTCCGGGTGACGCAGCATCGG 13315 29 100.0 32 ............................. CTCGCCCCGCGTGCGCCGGTCACCATCGCGAC 13254 29 100.0 32 ............................. ACACGGCGCGTAACGAGCGCGCTTTTGCTCCA 13193 29 100.0 32 ............................. ATTTGGTTTCGGCGTTCATGCTGCTTCCTTGA 13132 29 100.0 32 ............................. TCTCGCCCGCCAGCTGCCGACGCTGTGGTCAC 13071 29 100.0 32 ............................. CCGGAGCAGGCCAAGCGGGGGATGCCGGAGCC 13010 29 100.0 32 ............................. ATCTGCTCCAGGTTGTCCCGCAATCCATCGAG 12949 29 100.0 32 ............................. AGCCACAGGGCTCAGCGCATCGGCCATGGACT 12888 29 100.0 32 ............................. GTCGCCCGGCTATGGCCCGGCAGCGAGGGGAT 12827 29 100.0 32 ............................. CGTACGGCGCCATCATGTTCAATGCCGTGCTT 12766 29 100.0 32 ............................. AAGGACGAACGGCTCGCCGTGCTCGCGGTCGG 12705 29 100.0 32 ............................. GCGACGGTCTCGCCGAGCAGCATCAGCTTGAG 12644 29 100.0 32 ............................. GGGCGATGGTGAGTTCATAGTCGGCGGCCTCC 12583 29 100.0 32 ............................. CATAAAGCCGCGCCAGTCGCCTCACCTCCAGC 12522 29 100.0 32 ............................. TCGCCCACCTCGACAAGCACAAAGCGATCGGA 12461 29 100.0 32 ............................. CGCTCGGAGCCGAGGAGATGCTCGAGCTTGGT 12400 29 100.0 32 ............................. TGGACGCCGAAATCTTCAAGGACTGCCTGCAG 12339 29 100.0 32 ............................. TTCGTCGGCAAGCTCGCTGCCGTGCAGCGCGA 12278 29 100.0 32 ............................. TCGCGGCGAGACGCCGAGCATCTCAGCGAGAC 12217 29 100.0 32 ............................. AAATGGAAACTGGTATTTCCGCGAACGGTCGC 12156 29 100.0 33 ............................. CTCGGCCGGAATCAGCTTCCCGCGGCGCTCCGC 12094 29 100.0 32 ............................. GAAGTACAGACGTCTGGACGGGAGCGGCCGAC 12033 29 100.0 32 ............................. ACTTCTACAACTTTTCGCATATGGACAGCCTC 11972 29 100.0 32 ............................. GGGGGATTTGTCGTTTGGCGGTGGCACGTATC 11911 29 100.0 32 ............................. AGGCGGCGCACACTCGCCGTTTTCATTGATTA 11850 29 96.6 32 C............................ CGCGGTATCGGTCGCGCCGGCGCCGCCGCCCA 11789 29 100.0 32 ............................. GGCATGACCCGCATGGAAACACGAATCCTGTC 11728 29 100.0 32 ............................. GACGGCGTCGATCTCTGCGTGCGTCTTGGAGA 11667 29 100.0 32 ............................. GATTGCAGGAATTTGCCCGCGAGCATGGGCCG 11606 29 100.0 32 ............................. TTGAAACCTGCAAAGAGCATGGAATTGCGATG 11545 29 100.0 32 ............................. ACATCCGCCTGGGCGCCGAGGAGCGCGGCGGC 11484 29 100.0 32 ............................. CACGGGTGATCGCCTGCAGTGCCGGGCTTCCA 11423 29 100.0 32 ............................. GTCGGTGAATTCCTGCCAGTCGGGAATATTGA 11362 29 100.0 32 ............................. TTCCGTTGTCGTGGTGCTACTCGACCCGTCCG 11301 29 100.0 32 ............................. ACCGGAAAGGGGGTGCCGGAGTGCATCGCGAA 11240 29 100.0 32 ............................. TCGACCAGACCGGACCGGTACAGCTCCGGCCA 11179 29 100.0 32 ............................. AATGTCGCCGGCTAGTCCAGATTAAACGAACG 11118 29 100.0 32 ............................. GGATCGAGTGCGGTTTGAATGATGCCGTGCTC 11057 29 100.0 32 ............................. GGCGCCGCGCACGCAGCGCAGCGCGACATCCA 10996 29 100.0 32 ............................. TTAGGGTTTGGGAGGCGCAGCGGGTGCCGCGC 10935 29 100.0 32 ............................. GTGGTGGAGGATTGACAGACGGTGACCCGCCA 10874 29 96.6 32 C............................ GACACGAGGCCGACGAAGCCGGACACGATGAT 10813 29 100.0 32 ............................. CATACAACCGCTTCATGTCGTACTCCGCGCCC 10752 29 100.0 32 ............................. ATTCCAACCCGCAGAATCTGCACCGCGATTTT 10691 29 100.0 32 ............................. TTCGAGGATGCTTTCCGGCGTAGCCTTTTCCG 10630 29 100.0 32 ............................. CGCTCACCGCTTTCTTTGCCACGAAAATTCCG 10569 29 100.0 32 ............................. CGTTAACAAACCTACGGGGTGACGAAATGAAA 10508 29 100.0 32 ............................. TGCACCCGACCACGTACTGCCAAACGCATACG 10447 29 100.0 32 ............................. CAACAGCGTCAGCCTGATAGCCGGAAATCGTG 10386 29 100.0 32 ............................. GGTCGGCCCGGGACGTGTCCAGAAGGTGAAAC 10325 29 100.0 32 ............................. GAAGTCGGGTTCGTCACGACGGACGACGGCCT 10264 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 91 29 99.8 32 GGGCCTATCCCCGCGGACGCGGGGGAAAC # Left flank : CTTCAGCCGACGCCTGATGCAGCTCGCGCGCATGGATCTCATCGTCATCGACGATTGGGGCCTGGCCGCGCCGTCGGCGCAGGAGCGAAGCGACCTGCTGGAGCTGCTCGACGACCGGGTCGGCACGCGTTCGACCGTGATCACCAGCCAGCTGCCGATCGAGCACTGGCACACCTACCTGGGCGACCCGACCTTCGCCGATGCGATCCTCGATCGCGTCGTGCACGCCGCGCACAAGCTCGCCCTCAAGGGCGAGTCGATGAGAAGAAAGGAAAAGGCATGAGGCCGTGCGCGCGAGACGCCTTACCCACAGGCGCCCGCCCGCCAGCGCATGAGGCGCACTGGCGGCCGCCTGTGGATAAGCCTGCGCCGTGCCTCGAATCGAGCGTCATCGTGACCGACGCGGTTAGAATCTGAACACCACGCTTCGCGCGCAGACCCCACCGGTCACGTTCGTCGGTGCAGGCGGTCACGTTCGTCGGAATGCGCACAGTACAAGC # Right flank : TCTTGTGGATAGTATTTTGATCCAAAAGGAGAAAACGGAAAACTCATTCAAGTTTTTAAAGTGCGGATTACAACATCTTTTTCACCAACCACGTGCCGTCGACTTCTATGAGTTGGCGAGGCGGTTCGCCCAAGGATTCTATTCCGACGCCGCCCGTTTCATTGACGTCGCGCCACACCATCGTGATGCTCCCGCGTGGCTCTTCACTGTGCCAACTCGACAACACGTCCCACGTTCTGCTGCGAACACCCGGGTTCATGCGAGGCGACACATACACGGCCGGTGCCACTTCGAGCATGATCGACGCCAAGAAGCCGCGATAGCGGTCGGCGACGTCACGAGTCACGATCATCACCAACGCCATCGATTTCCTCAGTGCGTAAGACTTGTTTGATCTTGTCGATCATGGCCGGAATGACGGACTGCTTGCGAAACACCGTTGACGCCTCTCGCCTTACCAAGCGATCTATGCTGTCCGTGTGTCCAGCCAACGCCTTCTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGCCTATCCCCGCGGACGCGGGGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA //