Array 1 59850-57929 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHNN01000024.1 Levilactobacillus cerevisiae strain DSM 100836 contig24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 59849 29 100.0 32 ............................. ATCAAGAGCGCGACCTAAAACTGATTGGTCAT 59788 29 100.0 32 ............................. AATTGCTAGACGCTTCTCGTACTCAGACTTAG 59727 29 96.6 32 ............................C TATCGCCTGGCCTGCATAGCCGGGGGATGATG 59666 29 96.6 32 ............................C CGGTTGGTCGAGCATCGCGGCAAGTGATGTTT 59605 29 100.0 32 ............................. ATCCACCAAAGACGCTAAACGAGTCGTAACTT 59544 29 96.6 32 ............................C GGCTGCGGCAACTGATGCTAGTGCACACTCAC 59483 29 100.0 32 ............................. ATTAGTATTAGCAATCGAACCAGCATTAGAAA 59422 29 100.0 32 ............................. ACCTCACCTGGCGTTTTGTGCAGCACCTCCGC 59361 29 100.0 32 ............................. CAAGCAGCACGGCCCCGTTTTGTGGAGCAATA 59300 29 100.0 32 ............................. CACACTCGCCGCACTAGCGACCAGGCCTTGGA 59239 29 100.0 32 ............................. ATGACGGCTGATGTTCAAAAGGTCGTCCGTGA 59178 29 96.6 32 ............................C AAGTCAGTCTTAAAGCCGATTCACTATGCAAG 59117 29 100.0 33 ............................. CATTTCTTTACGCTTCATTTTGGGCCTCCTCAA 59055 29 100.0 32 ............................. TATTCAAGTTAGCTTAAAGTTTGAAGGCTGCT 58994 29 100.0 32 ............................. CGAAATCAGGTTGCTGAAGCAACGGGGGTCAG 58933 29 100.0 32 ............................. TTCAAATCGTTCATCGAGTCACCTAGCCGGTT 58872 29 100.0 32 ............................. CATTGGGACAACTTTTTCGCGGCCAAAAATGG 58811 29 100.0 32 ............................. GGGCTTAACAGTCTGCTGCACCTGTGTGGCAT 58750 29 96.6 32 ............................C CGGGCACGCGGGACCCATGACGTTGATTTGAT 58689 29 96.6 32 ............................C TTGTCACGGTGCTTCAGCTTCCCTAATTCTTC 58628 29 96.6 32 ............................A ACCTGAGTCTTAACTGTTTTTGCTACATATTG 58567 29 96.6 32 ............................C ATAGTCATAGTCATCCGCCACAGTCTTCAGCA 58506 29 100.0 32 ............................. TCCCTTCCTTTACTGTTTTAAGTATAGCATGA 58445 29 96.6 32 ............................C GTTGACCTTGACCCGCTGTACAGCCCAATTGT 58384 29 100.0 32 ............................. GAGCCATTTGTACTCCCGGCATATCAAGGAAC 58323 29 100.0 32 ............................. GGTTCAACGGATCCGCAGCAGACTGGAAAGGT 58262 29 100.0 32 ............................. ACGCCATACGCTTTGGCCGAACCAGTTGCCGC 58201 29 100.0 32 ............................. GATCGAAAAGGGTATGCCTATTTAAAAAAGGC 58140 29 89.7 32 ...........G.A..............C GCCGGCAAGGCTGCGGCGGACAACTCGCACGA 58079 29 89.7 32 ...........G.A..............C GATTTGCCTGACTTTATAACCTGTGGTTGGCT 58018 29 93.1 32 ...........G.A............... CAGATGGCTTACGGTGCTGACCTTAGTGCCAC 57957 29 79.3 0 .....................A.TT.AGG | ========== ====== ====== ====== ============================= ================================= ================== 32 29 97.5 32 GTATTCCCCACAGGTGTGGGGGTGATCCT # Left flank : GTGTGGGGGTGATCCTACGCCATACGCTTTGGCCGAACCAGTTGCCG # Right flank : CTCCCTTAAAGTAGGGGCCTTTTTTCATACATCTTCGAATGATTATTCTCTAGTAACATTATTAACTGGTGGAATAATGTTTTGTCTCCTTTACAAAACTGATACAATTCGGTTGTTGTTAAATTGAGGATGCTAAGTTATCCTTAGAAATAGTTTCCGAGATATATAATGCTCAATGTTAGCTAAAAATACAATCGTTAATTTTACCGATAACTTCACCGCATTCCTGGGAAGTCAGAGGTGGTAATTTAGTTACCGGGTCATATTTATCTGACGAAGAATTTGTTTGACGTTAAAACTATTTCAAATTAATTTCAAAATAGGTGGACATCACTAATCACATTGATGTATTATTAAGATGTTCCTCACAGAGATGTATGCAGTGAGGGTGATCCAGTGATTAGTGAAGGATAGTTTGGACTCGGCCAGTGTTCCCCACGCCTGTGGGGGTGATTCCTGATCTTATCCGCATTGATATGCTGGCTTGAAGTATTCCCCAC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACAGGTGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 13229-13562 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHNN01000030.1 Levilactobacillus cerevisiae strain DSM 100836 contig30, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 13229 29 100.0 32 ............................. AATGATGACTTAGATGAATTGGTTGGTTCTGG 13290 29 96.6 32 ............................C AAATTGTCGCTACGAGAGGTTGAACAAAAGAT 13351 29 100.0 32 ............................. ATCTTCAAGTGCCTTTGCGTCTTTAAAAGACT 13412 29 96.6 32 ............................C TCTAATGCAAGTGCTTCAACCGTTTCTTCTGC 13473 29 100.0 32 ............................. GACCAGCGGTAGCAGCACGAACGTTAACAGTT 13534 29 82.8 0 ............A...........T.TAA | ========== ====== ====== ====== ============================= ================================ ================== 6 29 96.0 32 GTATTCCCCACAGGTGTGGGGGTGATCCT # Left flank : TGAAATTCAAGTTCAATCCTTTCAGTGGATTGATTGTCAGTGACTCTTTAAGATTGAGATGAACCATTTTGCTCATCACTTTCCTTGAGTGATTCTAAGGTGTCTTTATACTGCTCGTAGGCCGAATCCATGGCTTCAACGAATTTTTTTGACAGTAGTTCATCATCCAATATGGTAGTTGATTCGACATTTAACTCACCCGTGCCAATCTCGAAAGATTTGTTTGGTTTAGGAATTTTTGACATTGCTGGCCATCTCCTTTTTATGATTTGCATTGGTTTGCATTGGCTTCTCATTGGAGCAAATACAGTATAACTTAAATGTGTACTTTTCGAAAATTTCTATTTCTTTGAACTAGATCTTGAATACTATTGACTATTTTGCAGCTGTTTTTCTAAGCGTTGTTATCGACCGCTTACTGATGTATGCTTAAGAAGCAAGTTAATTGAAAACGGCGATTCTTGAATTTTCAAAGCTTGATGTGACGGTGTTTTCTTAGT # Right flank : AAAAGTCTCGGGTAAAAGTGCATAATTTTTCTGTTTAGGCATCCGAATTTTATTGAGGGTGCCTTTTATGTACTGAATGGAACAGATGGTTGGTGTGGGTGTGAGTCAGCCCTAACCCTAAAACCTAGCTTGCCCTAGGTCGCCAACCTGTCTCTCACCCGAAAATCCCAATCCTGGCAGCCGCCGAAACGTGCTACGTGAGCCAGGTCCCTGCGCTTAAACAGTGATAGAACATCTAATTGGTTTAGGACTGACGCTTCAAATCACTTTGTTTTAGGTCGTCAAACTGTCTCTCGCCCGAAAATCCCAATTCTGGCAGCCTCTGAAATGTGCTACGCAGGGCAACTGGTTCCGCTTAACAACGCTAAGCAAAGCCCCCAGGCCCGGGGCTTTCACTTAGCGCCGTTAATGCTCGCCAGCTGTGCGCCCTGCTCCGCACTCTTTACCCAAAAATCCCCCGTCGTGACGTTACGACGGGGGACACAGTTTATTTCACTTAT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACAGGTGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1111-1274 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHNN01000041.1 Levilactobacillus cerevisiae strain DSM 100836 contig41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 1111 31 100.0 35 ............................... TTATTAGGCATAATTCTAAAGTTTATGAGTTTTAG 1177 31 100.0 35 ............................... AGTTTAACCATGAAAGTATTTCTGATGAGTTTTAG 1243 30 77.4 0 ..............C.CT...G..T....T- | GG [1256] Deletion [1273] ========== ====== ====== ====== =============================== =================================== ================== 3 31 92.5 35 AAGGATGTTAAATCAATAAGGTTAAACCCCA # Left flank : AACTTATATTCACACCAAAGCCAATGGCTGGTGTTATTTATCAAGCATTCAGGATTTATATTCACGTAAAATCATTGCCCATAAAATCAGCCGTCATATGACTGCTGATCTTGTGATCAGCACTTTTCAACAAGCCTTTGAAACTAGAAAGACGACTAATAACTTAATTGTGCATACCGATCTGGGTAGCCAGTACCGCAGTGCTGGCTTTGAACAGATCTTAGCGCAACACCATATTCGCCATTCTTATAGCAAGCGTGGCTGTCCCTATGACAATTCATGTTTGGAATCATTTCACGCCAGTTTGAAAAAAGAAGAGGTTTACCAACACCATTATCAGGATTTTGAAGAAGCAAATGCTGCAATATTCAGCTACATTGAGAGCTTTTATAACAGTGCTCGAATTCACAGTAGCATTGATTATTTAACTCCAAATGAAAAGGAAAAATTAGTCGCTTAAATTATACATAAAATGTGTCCAGATTCTTGACCTAAATCCA # Right flank : TATTGGTCTTTTTTATTTCTGTGCTATACTAGGAATTACAAGTGTTCATTAGAACTGTCCAAAAGGAGAACTGGAAATGGCTAAAATCGGTTATGCGCGTGTGAGTTCCAAGGAGCAACATTTAGATCGACAGTTAGCGGCTTTAAAAGACGTTGATAAATTATTTACGGATAAATTAAGTGGGGCTAACACTAATCGGCCAGAACTGCAAAAAATGCTGGCCTATATTCGTGAGGGTGATATTGTAATGGTCACTGAATTAGATCGCTTAGGCAGAAACAACCATGATTTGACTAAGATCATGAACTCCATTCAAAATAAGGGTGCCACCCTAGATGTGTTGAATTTACCGTCCATGACAGGGATTGCTGACCCAAATTTACGTCAACTGATGACCAACTTGATTATTGAACTCTATAAGTATCAGGCCGAGAGTGAACGTAAGCGAATTATTGAGCGCCAGCAGCAAGGGATTGCCCTCGCCAAACAGCAGGGTAAAT # Questionable array : NO Score: 4.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.62, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAGGATGTTAAATCAATAAGGTTAAACCCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 12893-13226 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHNN01000037.1 Levilactobacillus cerevisiae strain DSM 100836 contig37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 12893 29 100.0 32 ............................. ATTTTGTCCATATTTCTGACAAATTGCACGTG 12954 29 96.6 32 ............................C GGAATCGCGTTAAGCCCTTTGTTTCTTTTCCG 13015 29 100.0 32 ............................. AACGCCGGTACTTGAAAAGTTCGGTAAGCTTT 13076 29 100.0 32 ............................. CACCGCGATGTTTTGCGGGCAATTGACAGCAT 13137 29 100.0 32 ............................. GAAATTGGTGGCATGAGATACGACCGCAAGTA 13198 29 82.8 0 .....................C...ATTA | ========== ====== ====== ====== ============================= ================================ ================== 6 29 96.6 32 GTATTCCCCACAGGTGTGGGGGTGATCCT # Left flank : GACGACGAGCGAGGTCCGGTAGTGGCGGTCGGTCATGTACTGCCGCACGAGCTCCATCAAAACGACGGATTTGCCGGTCCCAGCAGCGCCCTCGATGATGGCGACGGAAGAGGTGTCACCCGTCAGGCCCTGCTTGATGTAGCTGTTGATGTTGGTGATCACGTGTTTCTGGTCGTCGGATAGGTCATCGACGAAGAACTGTTCTTTTAAGATTTCGTTCATGTTAGTGCGTACTCCCAATCAATTATTATTTTCATATGGACGATGCCGACGCCCACGGAAAGCTATTGTTATTATAGCAGTTATGGGAGAAAAGGCTGTGAGTTTTTGAAAAGCTGATGGATGAAAATGGGGGAATGAGCCGGTAATAAGGCAGCTTGCTATAGCGGCTAAAATAGTGATTGTGATGGGGATGCCACTGATGTATGCTTAAGGAGCAAGTTGATTGAAAAACGTGTTTTGGCGATTTTCAAAGTGCGGTGTGACGGCGTTTGTTTAGT # Right flank : ATCTCATACAAAGGGCCAGTTCTCCGAGGATTGGCCCCTTTGCAGTCCAGCAAGTAGAGTGAACTGAAGCTAGCAACATTTTCCGGTAATACTGATTGTGGTATCTAAGTGTTAGGACTACAATGCGACCAGATGTAACAATGCCCAATTTTTTATGATCATAATTAATATGGCAGTGAATCTCGGGTCAAAAAAAACCGTCCTCCTGAAAGAACGGTCTTCAAGTACTTGTTAATTGGCTTGGGGGAAGAAGATAGCAGTTGGCATGTAATAGTGCGTGCCATTAACCAGATAACCACAGGAGACTTGAACGCTACCCGTTTCATCTTTATCGTGATCACTAGCATATGTCGTTGTGTAAGTCTTGTACTGACGCTTGATAATCGTTAGGTACTGGGCATTGCCGGAGCTGCTAACCCGGTTGCCAATTGCACTAGGAACGGCTTGCTTGCTGTAAAGGTACGTTTTTCCGCTACCGGAAGGACGAACAGTTTTAGTGA # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACAGGTGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 15348-15743 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHNN01000037.1 Levilactobacillus cerevisiae strain DSM 100836 contig37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 15348 29 96.6 32 ............................C AACTATACCGGTACCTTGGCCGATAAGAACAT 15409 29 100.0 32 ............................. CCGGTGCCGCTGTATCGGAGATCCGCTTTTCC 15470 29 96.6 32 ............................C ATACACGTCGCTGGCTTCAATCAAGAAAAAAT 15531 29 100.0 32 ............................. CAGTGACGCAAACGTTGGCAGTCTTTCTGGGA 15592 29 100.0 32 ............................. GAGTCTCAATGACCTTAACAACATTCTTGCGT 15653 29 100.0 32 ............................. TCGGTCGCGGGGATGATTGCCAACACCAAGAA 15714 29 93.1 0 ...........................AG | C [15739] ========== ====== ====== ====== ============================= ================================ ================== 7 29 98.0 32 GTATTCCCCACAGGTGTGGGGGTGATCCT # Left flank : CCCAAGAAAGAAGTTGCGGGTATGTGGTATGAGCGGAAGACTAAGGTTTATGATGTTTTTCCAGGCGGCAAAATGTCTGACGCTAAGAAGGTCTATGCATCTTATTTAAAACTTAAGCCAGTTCGCCACAATGGTAGGAAAGCGTTGGCTCTATATCCAATTGAGGGTACTAAAATGACCTATTTCTATCGTCAATAAAAAATATGTCATAGCCCAGGCCTGATTCGTGAATGAATCGGGCCTTTCTGATATATGGAAGTAAACGAAGCAGGTATTGGCTGAATCCTTGGTTTCTGATCGGTGGTATTGCGGAAAAATTATGATGCTTTTGAAAAAGCATATGGAGAAATGAGAGAATTAAGCAATGATAATACTGCCCACTAAAGCGCCCAAAAAAGTGATTGTGATGGGAATGTCACTGATGTATGCTTAAGGAACAAGTTGATTGAAAACTGGGTTTTGGCGATTTTCAAAGTGCGGTGTGGCGGCGTTTATTTAGT # Right flank : GTTAATCCTGCCAGGCAGCAAGATGGCATCATTCAAAGTATTAGCGTGCGGGATCAAAGTGTATTTAAGATATTAGCGGCGTATCAGGAGAGCGTAATTAAATGGAAAAATGGGTTTCGTTTGAAAACGGTCAAACACTTGGTCAACTGGGAACTGAAGATGGCGTTATTCTAAAAGATGAAGAAATGCCTGGTATTGGAAGAATCACGCTCGAGGGAAAGCGCACTGAGGCTTCGATTACCTGTGGTCTATATGGGACTTTCTTTGATACTGTTTCTTCATCTTTAGAGGATGGGCCGCAAAAATATGATGAAATGAAGCTAGCGTTGGAGAACTCACCAGATGGTTTGGAAGAACTTGAAGTTTGGTGCGATTGGTTCGTTAACAAGTTCTAATTGCTAGCATTTGTGTTGTAGACCATGTATGGTTCAGGTATAATGCTAGAAAATCGGAAGGAGGGATTGTCGTGGCGGTTACAAGGGTAAAGATAAGTAAAAACA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACAGGTGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 83237-83814 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHNN01000015.1 Levilactobacillus cerevisiae strain DSM 100836 contig15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 83237 29 100.0 32 ............................. CGATTCGTGGTAGCCTAGATGATCCTTATGCT 83298 29 96.6 32 ............................C ATTTGGCGGTCCATTTCTGGCATCTTTTCGTC 83359 29 100.0 32 ............................. ATTGTCAGCCAAAGTGATGGCCGTCGTTATCC 83420 29 96.6 32 ............................C GATTTGTGGCGAGCAGTCCATGCTGGTCATAA 83481 29 93.1 32 ..........................T.C GCTGTCAAGGGTGTGGCCACTTCGGTGTGGAA 83542 29 100.0 32 ............................. GCCATTACTTCGCCTCCCCAGACGTAGTGCTA 83603 29 100.0 32 ............................. ACGCTAAGCATCACTCACAAAAGAATGGTGCT 83664 29 100.0 32 ............................. ACGCCAAAGAACATGCTGACGTGGTATGAGCA 83725 29 100.0 32 ............................. GGCCTGAAGGACTATTCGGTTAAGCCCGGTAC 83786 29 93.1 0 ..........................T.C | ========== ====== ====== ====== ============================= ================================ ================== 10 29 97.9 32 GTATTCCCCACAGGTGTGGGGGTGATCCT # Left flank : TAAACGTCTATCTGCGACAAATTGTGAATGACTTGTTGAATGAGGGAATGTTGGATGACCAGACACCACGGTATTCCAGCATTCCCGGTCGGCGTGTAGGTAATTTTAAATTTGTCATGCTAAACCAACAGTTTCAAGACTTGGGTGCCCAGAGTGATCTGCCAGCGCTGGACCGCTTGTTAATTGGCGGTCGCCTGTTGCTCCAGCGGATTTCGTTGTCACCGCAGCGCTGGTATGGGTTGGAATTCAGCGATGTGGTTGAGGAGAAGGTACCACTGTTTATTGGACAGCAGCCGGATCGGACTTTGCGGCGGAAGTGAGTGGGTTTGGTGAAGGTTTGTGTTGCTGAATGGGTCGTCTCGATTTGAGGCGGCTTTTTTCTTGTTGGCGACTTTTTTTCATTGTGGACCACCGATTTCTGAGGTATGCTTGAGAAGCAAGTTAAAGGAAAACGGCATTTTTTGAAAAACAGGATGCCGGTGTGACGGCGTTTCTTTAGT # Right flank : GCTGTCAAGGGTGTGGCCACTTCGGTGTGGAAGTATTCCCCACAGGTG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACAGGTGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.60,-10.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //