Array 1 43726-42145 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKMA01000031.1 Acinetobacter bereziniae strain TUM15235 sequence031, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 43725 28 100.0 32 ............................ CATTTCATAAATTTCGTGCCAGTAGTCCTCAG 43665 28 100.0 32 ............................ AATCAGATTAAATCAGGGAGCTAAAAATGGAA 43605 28 100.0 32 ............................ TCTTGCGCTCAACATCATTTGCATTGCGGGGC 43545 28 100.0 32 ............................ CAACAAAGGGTGGAGTAAAATTAGTATGAATA 43485 28 100.0 32 ............................ ATCACCAGTTCTGACAGTGGTTAAGTAACCCA 43425 28 100.0 32 ............................ CAAGAAACTGGCTTAACAAGAAGAGAGCAAGA 43365 28 100.0 32 ............................ GTAGGTCGTGAGATTTACGAAAGTGTCGCCAA 43305 28 100.0 32 ............................ GCATCGTCATCTAAAAACTCTTGGAAGGCGTC 43245 28 100.0 32 ............................ CCCGAGATATTTATTTGCGCGGTGTTGTCAAT 43185 28 100.0 33 ............................ GCCGAGGATGGCGGTATTATTGAATGGCTCATT 43124 28 100.0 32 ............................ ACGGTCATACATTTCTAACATAAGTGGAAAAA 43064 28 100.0 32 ............................ GTGATTACAGTCCTGACAGTCCTGATGGTGTG 43004 28 100.0 33 ............................ AACCGTATGTAATGAGACCAGTAACGATCTCTT 42943 28 100.0 32 ............................ TGGCGAGTACACCAATCAGATTATTCTTAATC 42883 28 100.0 23 ............................ GTGATTACAGTCCTGATGGTGTG Deletion [42833] 42832 28 100.0 32 ............................ AGTGTGTAGATGGCTATGACCGTGAATTGACT 42772 28 100.0 32 ............................ ATATAATCAGGCTCAAGTGCTAGATTTAGGAA 42712 28 96.4 32 ...........C................ TAATAAAAATAAATTAAAAAAAATTAGGAATA 42652 28 96.4 32 ...........C................ TGCTTGAAGAAGTGGATTTATATCTTGCAAGT 42592 28 96.4 32 ...........C................ TTGCTTATTAGTAACTTTTTGTTTTGGTGCGG 42532 28 96.4 32 ...........C................ ACCACGCCATTTGCCAAAGTTGAAAGTAAAGT 42472 28 92.9 32 ...........C....A........... CCATCCACAATCTCTCTCATCTGCTCAATCGT 42412 28 96.4 32 ...........C................ TGTTTCATGTGGTTCTGGTACTTTTGGAGAAA 42352 28 96.4 32 ...........C................ TAGATTATGTTACTTGCACTGCAACCTATTAA 42292 28 96.4 32 ...........C................ ATTGGGATATGAAATCTGTTGAAAATGATTTA 42232 28 96.4 32 ...........C................ TTGCTAACATTTTGAATTGCCGAAAAGTCTGA 42172 28 82.1 0 ...............AA.CC....A... | ========== ====== ====== ====== ============================ ================================= ================== 27 28 98.0 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : CTCAGACAGACAATAAATGATGCCAAATTTAGTAAACGGATCTCAGACAGACAATTTAATTCAAACAATTATGTTTGTAACAGGGCAGACGAAAAAGTTTATAAACCAAGCTGAATTATATTGAATACCACAAATCCAAGTTTTATATATAGGTAAAACAGAACGTATTTTTTATCGTGATATTGCTAGATTGGTTGAGCTAAACTTTTTAGATGATCAAGATTGATTGTTGTTGGCGAGTCAGTTTAAATATGATGAGTTTATAAATTGCTTGGCAATATTTTATAAATCTTTTGTAAATGAGGCAAAAGTAGGAAAATTTGGATTGTATAGATTTTAGTGAAAGAGAAGATAATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTAATGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTACA # Right flank : TATAAACGCCTTAACATCTTAGCTAAATTTAGAAAATTACAAACGATATGGAATAATTTTTATAGTAAATAAAATATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAACACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTAGCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACACA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [76.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 23190-23397 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKMA01000037.1 Acinetobacter bereziniae strain TUM15235 sequence037, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 23190 28 100.0 32 ............................ AAAGAAAAAAGATGACGCTTCTATCGCTGAAT 23250 28 100.0 32 ............................ ACCATAACTTGAAATAAATTCGCCCTTTAAGT 23310 28 100.0 32 ............................ AGTAGTAGGCAAAATTCCAGTACCATTTTTTA 23370 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 99.1 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TTCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACAAGTTTTATTGAATTTTAACATCATATAAAAATAATCTTTTTTAGCAGTTTATTGAGTTGCAAAGGAAGTATGTATTATCGTTTGCAAGATAAATTAAATTTTAAATATTTGATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTGAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTTGGGAAATATGCTTTTAATAGAATTACGATTATTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTACCACTTTATTTTTTGATCTAAAATTATA # Right flank : AAATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGATTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGC # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //