Array 1 8181-6226 **** Predicted by CRISPRDetect 2.4 *** >NZ_NHSN01000019.1 Halorhodospira halophila strain IM9626 scaffold0019, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================== ================== 8180 35 80.0 38 .........GC.......ACTCA............ CCCGGCGGGGCAGCTCCGGCGGGATGACCACGCGGATG G [8173] 8106 35 82.9 38 .......AT.........AC.CA............ CTGGTTTCGCCGGTTTCGGCGCGGGTGCCATCGGCGCG 8033 35 74.3 38 .......GAA........ACGC..T.A........ CCAACGTGCAGTTCGACCGCGCCATGGATGCTGTGATG 7960 35 77.1 41 .......AT........TACTCC............ GGGTTCCTCGCCCGCTGCGGCAGGCGTAGGAGTCATGGATA 7884 35 100.0 40 ................................... GCGCAGGGTCTTGGTGGCGATGTTCTCCAGGATCCCCGGA 7809 35 100.0 39 ................................... ACATTCCGCGAGCCAAGCTCGTTGAACGTGACTTCCTCA 7735 35 100.0 39 ................................... CGCTCGCCGCGGGTTTCGCAGTAAGACCGCTCAGTCATA 7661 35 100.0 39 ................................... ATGTTGCCGAAACGATCACCGATCCGTGTTTCCATCGAA 7587 35 100.0 37 ................................... CGCATAGGGGCGCGTATTTGCACTGACCCGTACTGCA 7515 35 100.0 37 ................................... CGGCAGCATCTCCGCGCTGGAGGCCCACGGGCTCTAA 7443 35 100.0 39 ................................... GGTGACCGTAGGTAGTTTAGGCCGGATGCCTGCTTTGTG 7369 35 100.0 38 ................................... GGGCGATGTCGGTGAGGGCCTTGGCTCTCAGGTCGTGG 7296 35 100.0 38 ................................... ATGCAATGACGGACGAAGTGAACCACCCGGCTCACTAG 7223 35 100.0 40 ................................... CTGGCCGAGGCCCAAGACCTGACCACCGAGTCCGGGCGGG 7148 35 100.0 41 ................................... ACCGGCGGCCGCGCTCCATCCATGCGTCGTCGAGAACCAGG 7072 35 100.0 39 ................................... GTTGTCCGCATCGGCGATCCGGCGTAAATACTGAATGAG 6998 35 100.0 38 ................................... ACAACAATTTGGCGTCGTCATACGCTAGCGTGAACATG 6925 35 100.0 37 ................................... GGAAGTGCGCGGCGTGGTCACGGTTTAACGGAGGCTG 6853 35 100.0 37 ................................... GGCAACACCACGGTTACGGTTGAGGATTCCCAAGGCG 6781 35 100.0 40 ................................... CACCGTAGCGCCGGCGGTGACAACGACGATGCTGGCGAGG 6706 35 100.0 39 ................................... TCCGCGCGATTGAGCCGGGCGCGATTATCGTAGCCGCCG 6632 35 100.0 39 ................................... GGCACACTCTTCGCACACCCTGTCATCATCCGCCGTCTG 6558 35 100.0 40 ................................... CGGCCAGCTCGTAAATCGAGCGGATATCATGGAGCGCCAG 6483 35 100.0 38 ................................... AAATGCTCAGGGAGACTTGACAATGGACGGACAGAACG 6410 35 100.0 38 ................................... GACAATTACCGCCATTCGTGATAACCTTGGGGTTATTG 6337 35 100.0 42 ................................... TGTGCAGGAATGGGTGCAGGAAAACCGAGAGCTGATCCGACG 6260 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ========================================== ================== 27 35 96.8 39 CTTCAACTCCACCCCGGCTGAGGGCCGGGGAACAC # Left flank : GGCGCTCGCCCTTGGCGACCATCGGGCCGCCGCGCTGGTGGATCGACTCCATGCCGAAGTTGCCGCCGCATGGCAGGAGAGCCATACAACCGGCTAAGTCGAGGTCCCTGGGCGTTTGCCCTCGGTCGTCGAGTGCGGCTGTTACCAACCCCGCAAACTGACCTACCGCAGCGGAAGCAGGTCGGCCAAAGACGGTGGCCATTGCTAGCGGTGAGGGGCGAGGGCCTGGGCGCCAGGACACCCACGTGTAATGGGTAAGTCTCCCCCGGTCGACGCTGCCACTCTCGTGCAATGGGGGCGCCGGTCTATATCTCGTCGATACGGCATCTCTCCTTGCGAGCGTACCCGGGGCAAGAGTCAGGCGCTTGCTCGGGCAGCAAAGTCGGCCCAGACGGATCCATGCGCCGCGGATCCGCTGGTACCGGACCTTTCCCCCCTGGGCAAGAGACGGTCTAAGCCGTTGGTCCTGCGCGGCACCACCGCAAGGACCGGCGCAACGG # Right flank : AGCACCTTTCAACCACCGGACCTGAAGGGTCTCTGCGACCAGGTTTGCGAGTGGTCCGCTCCTCGGGACGCCTGTCACTCCTGATTGGCCCTTCGATCCGCACCTCACCCCTACCTAACCTCCTGCCTCAGCTCGCCTTTCGCCGCTGCGAGCGCTCCCCGGGGTTACTGGCAGCACTGAACTGCTCGCAATGGGTCAGCAAGCCGAGCCCACTGCCTTCACCCGCCCCCAGAATGAGCGGCCCGGCGACGCGCTTCTGGAACTCCACGGTGAGGAACTTGCGCGGATAGGAGCGTAAGTAGTGCGGTAAGGCCACGCTCCGTGCCGAGCAGACCCCCGGCAGCTGGGGCGCGTCATCAATCCGGACCCGACGCACGGCCTCTTGGGGAATCCCCGCGTGCCGCAGCATCCGGCGCACCGCCTTCTCCGGGCGGGGGCGTCCGCGGCGTGTGTCGAACCCCGGGAAAATCACCGGTGTCGCCGCCGACCAGACCCTGGCC # Questionable array : NO Score: 3.10 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCAACTCCACCCCGGCTGAGGGCCGGGGAACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-15.00,-16.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-31] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //