Array 1 30-1330 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVFL01000106.1 Morococcus cerebrosus strain 480_NMEN 1601_1330_37459_978+,...,978+, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 30 33 100.0 34 ................................. TCCACGACAAAACGACCATTGCCCAAATCCATCC 97 33 97.0 33 G................................ ACGGCAATGCGCCCATCGTTGAGCAGACAATCA 163 33 97.0 33 A................................ GTCCAAAGAGTTGAATCTGACTCAGGAAAATGA 229 33 97.0 33 A................................ GTATTGTACGGTACTCTGACGAAAATGATTTTT 295 33 97.0 36 G................................ TGGTGTTCCTGCAACAGGCACGCGGTAAGGTATTGG 364 33 100.0 33 ................................. CCCGAATGGGCATGGTGTCCCCTTTATTTTGGA 430 33 97.0 34 G................................ TGCTAATCCCGAAACTAAAAAGACCACGCCGCCA 497 33 100.0 33 ................................. TAACTAACCATGTAGGATTAAGTATGAATAAAA 563 33 97.0 33 T................................ CTGTTTTGCTATCCAACACAATATTTGAGAAGA 629 33 100.0 33 ................................. GCCAACAGGAAAAAATCAATGAGGCTTTGCTAG 695 33 97.0 37 T................................ AGCGCACATAAAGGCTGCGCCAAGCTCTGCAATCAGT 765 33 97.0 34 T................................ CGTCATTGAGTCGGCGGTTTTGAATATCCGACCG 832 33 97.0 33 A................................ TCGAACCAAGCAACGAGATTATAGACCCAGAAA 898 33 97.0 33 A................................ TTTCCGCACCCGAACCTGCGCCCGGTAAACAAC 964 33 100.0 34 ................................. TCCACGACAAAACGACCATTGCCCAAATCCATCC 1031 33 97.0 33 G................................ ACGGCAATGCGCCCATCGTTGAGCAGACAATCA 1097 33 97.0 33 A................................ GTCCAAAGAGTTGAATCTGACTCAGGAAAATGA 1163 33 97.0 33 A................................ GTATTGTACGGTACTCTGACGAAAATGATTTTT 1229 33 97.0 36 G................................ TGGTGTTCCTGCAACAGGCACGCGGTAAGGTATTGG 1298 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 20 33 97.9 34 CCCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC # Left flank : CGCACCCGAACCTGCGCCCGGTAAACAACC # Right flank : | # Questionable array : NO Score: 5.59 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.43, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.80,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [16.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 5569-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVFL01000107.1 Morococcus cerebrosus strain 480_NMEN 1602_16987_278820_978_,...,1072+, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================== ================== 5568 33 97.0 32 T................................ AATGAGAACGGGAAAATCGTAAAAGGCGAAAA 5503 33 97.0 35 T................................ GGTTCAATCGGCATACCTCGGAAGATATTAATATA 5435 33 100.0 34 ................................. CAATTCGGCGTTTTAAAAATCCAGTTTTGATGCG 5368 33 97.0 34 A................................ ATTCAAAACGCCCCAACCGGACAGCAAAGCCACA 5301 33 97.0 35 T................................ TGATTTCAGTTTTTGCAATTTGGACAAAAAATCGT 5233 33 97.0 35 C................................ TCCAGCCGTCTGACCTCGTTACGGCTCATTACACC 5165 33 100.0 34 ................................. ATCGATTTAAGCGCGTACTCAGGCACAGGGATAA 5098 33 97.0 33 T................................ CGTGAAATCATCGGCAACCGGCTGGCGGAACTC 5032 33 97.0 33 A................................ CCAGCGAGTAAGCACAGAAAAGCCAAGACGGGC 4966 33 100.0 36 ................................. AGGCGCGGCCAAAGATCCGATGCAGGCATGGGAAGA 4897 33 100.0 35 ................................. ATCTGTTTCAGCAGTTTCGCTATGTCCTTTTTATG 4829 33 100.0 34 ................................. TGTTCTTATAACGGCTGTTGATTCCTCACTCCCC 4762 33 100.0 34 ................................. AAACTGGATAAATTTCAAAACATCGCCTTCGATT 4695 33 97.0 34 T................................ TCCGTTGCAATTTGTCCGTCGCCGCCCGACACGG 4628 33 97.0 34 C................................ CGGGATAACGAACACTGCACTCTCGGCAGACACA 4561 33 100.0 34 ................................. TCCAACAGGCTGGCTGACCCTCCTAATATCTCTC 4494 33 100.0 32 ................................. ATCCTATTTACAATCCTTCATATAGACCGCGA 4429 33 97.0 33 A................................ CCTGCTTTACCATACGGGTATCCGTCGTGAAGA 4363 33 97.0 32 A................................ TGGTTCTTCCTCATCGCTCAAAATCGAAGCCA 4298 33 100.0 35 ................................. ATCCGCCAGTCTGTTCTCCAGCTGACTCGGGACAA 4230 33 97.0 35 C................................ AGGAAGATGGCACGGCGTTGTGGCCTGAGAAACAC 4162 33 100.0 34 ................................. TCGCGGTAATACTTAGCCTCAATGCTGACGCACA 4095 33 97.0 34 C................................ CGCTTCGCCACGCGCTTCCAGCTTGTCGCTTACG 4028 33 100.0 34 ................................. GCCGATGGTTTCGGTGATCACCTGCCAAACCGCC 3961 33 97.0 33 T................................ GATAAACGCCTGGCCCGTGCTTTTGAAAAAGCC 3895 33 97.0 33 C................................ TTATGCCGGTATTCTTGTTTACAGCAATTATTT 3829 33 100.0 34 ................................. AAGGCGTGGGCAATCTGCTGCAAGTGCGGACGCG 3762 33 97.0 34 C................................ TACCAATGATGTAGGCGTTGTTTTTGAAACACCT 3695 33 100.0 33 ................................. TATAATTGTCGTCCTGTTGTGACTAAAACATAA 3629 33 97.0 35 A................................ AGGCAACGGCGCGGCATATGTTGCCGATAACAAGG 3561 33 97.0 34 C................................ CTACACCATCAAGGGCGCACCGCTTGGGCAGATT 3494 33 97.0 34 C................................ AAACTGTTTGGCATAGCCAGCATTACCCGTTAAA 3427 33 97.0 33 C................................ TTCTTTCTTGATACCCGTGTATTTTTGAATCTG 3361 33 97.0 34 C................................ CCTGCTGATAAATGCACGTCCTTGTAAAACGGGA 3294 33 97.0 32 C................................ TTTTCTGTACATTTTCAGTCGTCATGCTCGTC 3229 33 97.0 34 A................................ AACATCCAAGGCGACCCGCAAGAGCTAGTTCAAA 3162 33 97.0 34 C................................ TCGCCAAACGATATTTACAACTGGCCTATCTACT 3095 33 97.0 34 A................................ CGGCAGGCATTAACCCACTGACGCAACTGCATGA 3028 33 97.0 34 A................................ GAAAAGAATTGCGGCATATTGTTGGCGGCTTCTT 2961 33 97.0 33 T................................ TGGCGTCGCCAGCTTCGCCGCATTTTCGCGCGC 2895 33 100.0 33 ................................. AATGCGTGAAAGATAAGACTGTTTCAGACCCGT 2829 33 97.0 35 T................................ TGATCTTACACCGAAATTACTTTGCAGATACTCGA 2761 33 97.0 34 A................................ GCTAAACCCATGTCCTCCGAAACTGTCCGAATAA 2694 33 97.0 33 A................................ CCTAAACTCACCGAATTTGGGTAAATCATTGAC 2628 33 97.0 34 A................................ CATAATTTCAGGAGATGCGGTCGTATCCGATGAA 2561 33 97.0 33 A................................ CACCAACACGGCCTCTTTGGCTTCACGGAGGTT 2495 33 100.0 35 ................................. TGTCATATTCGGCATACGCAAGGCAGCATCCATCA 2427 33 97.0 40 T................................ TGATAAGCCTGTGTTCAAAAAAGGGTAAACAAAGAATTCA 2354 33 97.0 34 T................................ AAAAATCTGAATGCATGGCAAGCGTTCATGCTGA 2287 33 97.0 33 T................................ AGGCTCATTACGAAGTACAAGATTAGGTCGAGT 2221 33 97.0 33 T................................ TTCGGCTTCGTTACGCAGCTGGTTCAATGCCAC 2155 33 100.0 33 ................................. CTTGATGGCTTTTGCCATTGCGCCGGCGCGGTC 2089 33 97.0 32 T................................ GGCAATATGTACCGCCTTAAGCGTTTTGCCTT 2024 33 97.0 32 T................................ GTTGTAAATTGCAAATCCCCAGTCCTCGTCAT 1959 33 97.0 33 T................................ AAAACTATGGCGTTATCGCTTCAGGCTTGACGG 1893 33 97.0 34 T................................ AAAAACCGCCTGTCCGTCTATATGCGTCGGTCGT 1826 33 97.0 31 C................................ CGTAAACTTCCATTCTTAAACTCCTGAAACT 1762 33 93.9 32 TT............................... AAGTATAAGGCTATCCATAACGAAGCACAGAG 1697 33 100.0 33 ................................. AGATTCCTGTATGAAGAAGATAAAGGTACAAGG 1631 33 100.0 34 ................................. TTTAACAACACCTTAGACGACAGACGTAAATTGT 1564 33 97.0 32 T................................ TGTCTTGTCGGATATACCGTGAGAAAGTAGCA 1499 33 93.9 34 T...............T................ GACCACATGGGCGGCGACGCTGAAATTCCGCAGG 1432 33 97.0 34 A................................ AACCTGATGGTAGTCGCCGTTACACAAATGACTA 1365 33 97.0 34 A................................ AATGTTGAATATTATAATTCAAATTATAAGTTTG 1298 33 97.0 35 T................................ ACAAAGAGATGCGCCAACTTTCCGCACTGATGGTC 1230 33 100.0 32 ................................. AAGCCCAGGGGCTTAACCCTCGTGTTTATAAA 1165 33 100.0 33 ................................. TTCCGAGGTTGTTTTTGAAGATGCAGACGGGAA 1099 33 97.0 35 C................................ TGGAAAATATTGAGCAAAAATATGCGGCAGACCGT 1031 33 97.0 33 A................................ ATGGGATTGCCGATGCAGATTGACGGCATGGGA 965 33 97.0 34 T................................ GAGATTTGCGAGACCAGGTTACCAAAATCAGGGA 898 33 97.0 34 A................................ AGGAGCTATAAATGAACGTGAACCAACTCACACA 831 33 97.0 35 A................................ CTTATTTTCCCCATTTCGCAGAGCATCAATTATTG 763 33 97.0 33 C................................ AGTCATCACTTGTTCGATTTGGTATTTGACCCA 697 33 100.0 33 ................................. GGGTGCGGAAAGAAGGGTATCCGGATTTTAGCG 631 33 97.0 34 A................................ ATGAAGCAGATCAACAAAAGCGAGACCCCATAAT 564 33 97.0 32 C................................ ATTAATGTCAATCCATATGCAGTATTACATTG 499 33 100.0 33 ................................. TCGAACCAAGCAACGAGATTATAGACCCAGAAA 433 33 97.0 33 A................................ TTTCCGCACCCGAACCTGCGCCCGGTAAACAAC 367 33 97.0 34 C................................ TCCACGACAAAACGACCATTGCCCAAATCCATCC 300 33 100.0 33 ................................. ACGGCAATGCGCCCATCGTTGAGCAGACAATCA 234 33 97.0 33 A................................ GTCCAAAGAGTTGAATCTGACTCAGGAAAATGA 168 33 97.0 33 A................................ GTATTGTACGGTACTCTGACGAAAATGATTTTT 102 33 100.0 36 ................................. TGGTGTTCCTGCAACAGGCACGCGGTAAGGTATTGG 33 33 97.0 0 C................................ | ========== ====== ====== ====== ================================= ======================================== ================== 84 33 97.8 34 GCCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC # Left flank : TGCACATGGGAATACAAAATGCTGATGTTGATTACTTACGATATTTCGCTGGAAGACGCGGAAGGACAGGCAAGGCTGCGGCGCGTAGCGAAATTGTGTCTGGACTACGGCGTGCGCGTGCAGTATTCGGTATTCGAATGCGACATTGCACCCGACCAGTGGGTCGTTTTAAAGGACAAACTTTTGAAAACCTACAACCCTGAAACCGACAGCTTGCGCTTTTACCATCTGGGCAGCAAATGGCGGCGCAAAGTGGAACACCACGGCGCAAAACCGGCGGTGGATGTGTTTAAGGATACGTTGATTGTGTGAATCGCCAACCTACAGTTCTCATGAAAATGCTGCAAGGTTGGCGAACTGGGATTGTTCTTTAACAATCAGGATATTGTGAATGCGGGTGTAACGAAAAAGGCTGTGTTATACTCGCGTTCACGCTTTTCTTGGGAGCTTAGCGAAATCGGGGCTGCGAAACCTGATGGAGCAAGGCTTTTGAGAGAGGC # Right flank : C # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.35, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TCCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.20,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 28259-25912 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVFL01000117.1 Morococcus cerebrosus strain 480_NMEN 1612_28287_452527_1105+,...,978_, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 28258 33 97.0 34 C................................ TCCACGACAAAACGACCATTGCCCAAATCCATCC 28191 33 100.0 33 ................................. ACGGCAATGCGCCCATCGTTGAGCAGACAATCA 28125 33 97.0 33 A................................ GTCCAAAGAGTTGAATCTGACTCAGGAAAATGA 28059 33 97.0 33 A................................ GTATTGTACGGTACTCTGACGAAAATGATTTTT 27993 33 100.0 36 ................................. TGGTGTTCCTGCAACAGGCACGCGGTAAGGTATTGG 27924 33 97.0 33 C................................ TTATGTCCTAAATATTGAGTTAATTTGTATCTG 27858 33 97.0 33 T................................ AGGTGACCGAGCGAAAAGATATTATCGCTCGCA 27792 33 97.0 33 A................................ ACACATCTACACACCTTCGTTGTATCTGTGGAG 27726 33 100.0 35 ................................. TTTTTTGACGACAGGATAGGCAAACGAGATAACCA 27658 33 97.0 34 C................................ CCGTTTACGGTAGATACACAGCAAAACCGTGTCG 27591 33 100.0 34 ................................. AATTTCGCCTGACAAAATCCGCTCCGGTAACGTC 27524 33 100.0 34 ................................. ATCTCAAGCGAGGCGTGCATAATATCCGACCCTG 27457 33 97.0 36 A................................ CTCCGTGATATAGGGTGGGACGATAGCAGGATAGTT 27388 33 97.0 32 ............T.................... GAGGTATTGGCTGCTACAAGCAACAACATCCG 27323 33 97.0 34 A................................ CACATTTCGGCGCGTTTATTGAAGCAACCCGGGT 27256 33 97.0 34 C................................ AAGCTGTCGGGCCGCTTCGGAAAGCTGGAGAACC 27189 33 100.0 33 ................................. GTGTTATTTGACGATAACCTTTATTACAAGATG 27123 33 97.0 34 A................................ ATGACAACATAGACGGACAGCAAAGCCATGCCGA 27056 33 93.9 34 C............A................... GGCGCTGCGTCAAACATCGGCACTTGTTCGCCGA 26989 33 97.0 33 A................................ TTTCAATCACGGCGCGGTATTCCGCTGCTATTT 26923 33 97.0 33 C................................ AATTTATCGACAATCGCCTTACCGTTTACCACC 26857 33 90.9 33 AG...........A................... AACCGACATTTCCCATCTTTCATCATAAAAACG 26791 33 93.9 33 A............A................... ACTTCCTGAACCATCCCCATTACCATCAGAATT 26725 33 97.0 33 .............A................... TTTGTTCTCGGTTCATGGTTCAATTCCTGACCT 26659 33 93.9 31 .G...........A................... AGTCAAAGGGTAAGCTAATTTACCGTTTCTT 26595 33 93.9 32 A............A................... AACCGAAAAGGAAATACGATCAAGGTAATAGG 26530 33 93.9 32 .A...........A................... TTATAGCCCAAGGCACTGGCAATTTGCAACCC 26465 33 93.9 32 C............A................... TTTGGGTTATTCCCGTTGCTTTGATTGTGTTT 26400 33 93.9 31 .G...........A................... TTTTCGCCCTCTGTCAGGATAAACCAATCCT 26336 33 90.9 32 TA...........A................... CTCAGAGAGCTTACCTGCGCCTTCTGGCAAAT 26271 33 93.9 33 C............A................... GTGACAAATTTCGTTTTAAAAGAGCTGCCTTCG 26205 33 90.9 32 AT...........A................... GTCATGAGAATGGTTTTGAAACTCTTTATGGG 26140 33 93.9 32 C............A................... GTTTTCGATAAATACTCCTCTCAACCGAGCTT 26075 33 100.0 33 ................................. TGTACAAAAACAAAACGGCATTGGCATGGCGTG 26009 33 93.9 32 CA............................... GTTTGTGCGGCTTGCTGCTAGTACGATTTGCG 25944 33 93.9 0 CG............................... | ========== ====== ====== ====== ================================= ==================================== ================== 36 33 96.1 33 GCCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC # Left flank : CGCACCCGAACCTGCGCCCGGTAAACAA # Right flank : CCGTAGCGAGGGAGCAGATGTAGAGGCGCAGGCCCAGCCGTCTTCAGCTAACCATATATCGAAGCCGGACGTGCTTTCCTGATTTAAACCGCCTGTAACCATCTGCTTTTTGATGGTTATGTCTGAAAAATTATCTTTGGGATAGGAAATCGTTAATCCATCAAATCTCTGTCTTTCAGACGATTGAAATCGGATTTGTTCTATTCTGATTAAATCGGATTTTTACAGCTTCAGGCTGCCGGATAAATTTGATGCAATGCAGGGTTTGATTGGCAAGGGGCTGGATAAAAATGGCAGCTTTGTTATAATAAAACTACTGGCAGTTACATACTTTTCTTGGCATTGCGCCGTTTTATTCATATTAACGAAAGAGGAAAACAAAATGTTTCCAGAATATCGCGATTTAATTTCCAAATTAAAACAAGAAGACGCTCACTTCGCCCGTCTGTTTGACGAGCATAATGAGTTGGACGATAAGATTACCGGCTTGGTTAATAATC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.25, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC # Alternate repeat : CAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TCCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.00,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [41.7-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 30034-30629 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVFL01000145.1 Morococcus cerebrosus strain 480_NMEN 1642_74566_1174357_889_,...,1393+, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 30034 36 100.0 34 .................................... TATTTCAGGTACTCTTCTTTGTTGGCGTGAATAG 30104 36 97.2 34 ............A....................... GATGTAATTGATAGGTATTCACGCTTCTTTATTG 30174 36 100.0 34 .................................... ATATAAGTCCCTTTCTAGTTTCAAATCCTGCTGC 30244 36 100.0 34 .................................... GTATCCTTAACCGTAACCTTGACGAAGATGTTTT 30314 36 97.2 33 ................T................... ATTCCTTGACGAAGTTTTTTTCCGCTTGTGCGT 30383 36 97.2 36 ....................C............... TACTTACAATTACCTTCGACTTGACACTCAATTTTT 30455 36 100.0 33 .................................... CTCCCTCCGCAATCGCGTCTGTCAAACCCGCCA 30524 36 100.0 34 .................................... TTGTGGTGGCAGTAACAGTTGATGACGCGGTTGT 30594 36 83.3 0 ....................C.......G..TCA.T | ========== ====== ====== ====== ==================================== ==================================== ================== 9 36 97.2 34 GTCGGAAGACTTGCCCCACTAATCGGGGATTAAGAC # Left flank : GGCAAGAACGAATGGAGGAGCAACCAAACAAGATCATAGGCAACCAAGCACACGACAAACTCTATCAAGAATGGAAGGCAGCCCTGCAAACCGCCGCAGAAAGCCCCGATTTCAGCGCGGAGCAGAAAGCCGAAATCGCCGTCGCGTTTGCCGTCAAAAAGATGATGGCAAAATACGCGAAATGGCTGACCGACAAGCGCGGTAAAGAGCTGAAACCCATCCTGACGAAGCTGCGTGGCGAATAGATTTTCGTCTTTGTCAAAGCCCGAGCTTTTCAGACGACCTAAAGCCGCAAAACAGTTAAAAAGCGTTGTCGAATGCAAAGCAGACGGCTATAATCCGCAACACAAGTTTTCCGACGGATAGCAAAAAGTCTGTCTTTCGGCTGCTCTTTTCAGTTAAGATTTTATTAAATAATGTCTTTGTTAGTTAAGGAAAAATGCTAACCTTTCTTAACCATATAGAAGACTGAAAATAATGAAATTTTTTAACCGAGCGCA # Right flank : TCTTTTCAGACGACCTCAAGCCTGGGTCGTTTGAAAACGTAGGTCGGATTCTTGAATCCGACAAATATTCCGACGTTTCTACATAGCAAAACAGCCTTGATATTGCATCAAGGCTGTTTTTGTTGGCGGAGGGTTTGTGTGAGTTCGGGGGCGTCTGAAAGGCGGCTTTGCGCTTACAGCTTGCCCACGCCGCCCAAGATGATGCCTTCGGGCAAGGCGGGTTTGCCTAGGGCATGGATTATGCTGCTGTTGGGCAGGGGATAGCAGCGTCAATTGCCCAGCCGCCGCAAGTCCCGATTTCAGCGCGGAGCAGAAAGCTGAAATCGCCGTCGCGTTTGCCGTCAAAAAGATGGAGCAGGCGTATAAAAACTGGCTGACCGGCAAACGCCCCAAAGAGCTGAAACCCATCCTGACGAAGCTGCGCGGCGAATAGATTTTCATCTTTATCGAAGCCCAAGCTTTTCAGACGACCTAAAGCCGCAAAAGGGTTAAAAAGCGTT # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAAGACTTGCCCCACTAATCGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 33436-33060 **** Predicted by CRISPRDetect 2.4 *** >NZ_JVFL01000145.1 Morococcus cerebrosus strain 480_NMEN 1642_74566_1174357_889_,...,1393+, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== =============================================== ================== 33435 24 100.0 46 ........................ GGGGATTAAGACGCAATGGCACCTTCATGTTTGAAGTAGCCTGCAC 33365 24 100.0 46 ........................ GGGGATTAAGACACAACATCATTAGTGTTTGGACGTGCATTTCTGT 33295 24 100.0 47 ........................ ATGCTTAAAGCTTTTCAGACGACCTCAAGCCAAGGTCGTCTGAAAAT 33224 24 91.7 46 ..........C........T.... GGGGATTAAGACACAACATCATTAGTGTTTGGACGTGCATTTCTGT 33154 24 100.0 47 ........................ ATGCTTAAAGCTTTTCAGACGACCTCAAGCCAAGGTCGTCTGAAAAT 33083 24 75.0 0 A......A..C......T.TC... | ========== ====== ====== ====== ======================== =============================================== ================== 6 24 94.5 47 GTCGGAAGACTTGCCCCACGTATC # Left flank : GACCTCGTTTGCATCATCGACTACAAATCCAACCATCTGGGCGACAACGCCGAAGCCTATACGCAACAAGCCATGAACGAAGCCGTAGCAGACCACCACTACTACCTGCAAGCGCTCATCTACGCCATCGCCGTAGCCCGCTACTTCAAACTGCGCGGCAAACCGTTACCCAAAATCGCCATCCGATACCTCTTCCTGCGCGGATTGGACGGCACGGAAAACGGCGTCTGGCAATGGAACTTGGATACCGAGTCCTTGGCACAATGGCTGTAAATCGAAGCACAAAGGTCGTCTGAAAATGTTCAAAAACATTGTGAAATGCAAAGCAGACGGCTATAATTCGCCTCACAAGTATTCCGACGGATAGCAAAAAGTCTGTCTTTCGGCTGCTCTTTTCAGTTAAGGTTTTATTAAATAATGTTTTTGTTGATTAAGGAAAAATGCTAACTTTTTTAACCATATAAAATACTGAAAATAATGGAATTTTTTAACCGAGCGCA # Right flank : GGGGATAAAAATCAAACAGCCTTGATGGTTCGCTCCATCAAGGCTGTTTTTGCGTCGGGCGTATTGTCAAGCTGCTTGGATAATGCGGTATTGCCCGTTGCCGAATACGGTTTCCTTGCCCAAGTGCAGCCATTGCCCGATATACAGCATTTGCGAGAAGGCGGGCGAAAGGCCGGTCAGCTGCCATGTACCGATTGCGCCGCTAAGGGGTGTAATCTGCTTCTGACGGTTGGAAAAACGGCGGTGTTCGTGCCATGAAAGCCGGGGCGGGACGCCTTGTCCGCCGATTTGGGCGGACAGCTCGGCAGCGTTTGCATTGTTGCCCCAGTGCAGATGGGCAAGCGTCAGATAGCGGCGCAGGAGCTGGCGCAGGAAAACCGCCTGCGTCAGTTCGGTTTCCCGCAAAATCCTGCCTTTTTGCTGGATACGCAGAGGCGTCAGCAGCTGAATATGCGCTTGGGTGGGATAGCGTTCGGGCAGCCTGATATGGTTGTCGTGCA # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAAGACTTGCCCCACGTATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //