Array 1 26-1559 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTFL01000020.1 Dictyoglomus thermophilum strain PYS_80_B NODE_20_length_1585_cov_464.891, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 26 29 100.0 37 ............................. CAAGAGCAGGAGAAAGAGAAAAACAGACAACAACCAG 92 29 100.0 37 ............................. ACACCCGGCAAGACTACTCGTTGAAACATCATATATG 158 29 100.0 37 ............................. TTGGGAGAAAGGGTCGGAACCTACTAAACCACATCCT 224 29 100.0 35 ............................. CCGACAGTAAAAACAAAATCCCATTCCAAAAAGAG 288 29 100.0 36 ............................. CCGATAAACAGCCTTCTCCAGCTTTACGCCAGTCTC 353 29 100.0 36 ............................. TTCGCTTGACTTAATTTCATAAAAGTTCCAAAATAT 418 29 100.0 35 ............................. TTGCTTTGGATGTAGAACAGCTCTTCTATAATCTC 482 29 100.0 36 ............................. TTGAGGAAATAATCTTAGAATTTTCTGGAGTTTTTC 547 29 100.0 36 ............................. GGAGAATTGCTAAAGGATTTGTCTTGAGACAGAGAT 612 29 100.0 37 ............................. CTATATCCTTTTCTCCAGCCAACCCCCTGATAAGAGA 678 29 100.0 36 ............................. TCATTTATAGGAATCCTTCTGGGGCTAATCTTCTGA 743 29 100.0 36 ............................. ACGTTCTTGATAGTCCCGATGATGCAATTTTTATAC 808 29 100.0 36 ............................. ATAAGCTTACTTGAATTTATACCAAATGCTCCCAAG 873 29 100.0 36 ............................. TCGGCAATGATGTAGGATATGTAGACGTTTGGGACT 938 29 100.0 38 ............................. TTGCTACTTAGGAAAACTCTCGGGAGAAATGTGGATTG 1005 29 100.0 36 ............................. CACCACAAGGCTTTAAAGTAGCGCTTGCAAAGTATC 1070 29 100.0 36 ............................. ATAAAACCCCCACCCTAAACGGCTACGAAGTGCTTT 1135 29 100.0 37 ............................. TATATTTTTGTGAATAATATCTAATAACCTCATGAAC 1201 29 100.0 36 ............................. GAAAAGACTTGTTTTAGTTGTGAAAAATATACACAA 1266 29 100.0 38 ............................. TCAACTGCCGTTGCACAATTGCAGCGGTGATAAGTCAG 1333 29 100.0 36 ............................. GACGACGCTATAAAATACAAAGCTTCCGCAAGTTCT 1398 29 100.0 37 ............................. TAAATGGAATAAATTCAAACAGGACGTAGACAATGCT 1464 29 100.0 38 ............................. GGAGAACGACGATAACGGCGGGAAGTAAGGATTACGTG 1531 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 24 29 100.0 36 ATTTAAATCCCACATAGTTCAGATCAAAC # Left flank : ACCCTAATAAAAACCCTCTTGCTTTA # Right flank : GCCTATATGAACCCGTAAGAGAATAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATCCCACATAGTTCAGATCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [26.7-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 24151-22983 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTFL01000010.1 Dictyoglomus thermophilum strain PYS_80_B NODE_10_length_24151_cov_129.21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 24150 30 100.0 37 .............................. TACTATCAACCCCCTTACTGATATTTTTCTTTAATAA 24083 30 100.0 37 .............................. TACTATCAACCCCCTTACTGATATTTTTCTTTAATAA 24016 30 100.0 37 .............................. TTTTTGGTATCGTAATAAACTCTTCTTCTCCAGCCGT 23949 30 100.0 37 .............................. GTTATGATAGTGCAATCCTTCTTGAAGTTATCCCAGG 23882 30 100.0 37 .............................. TATAAAAGAGCTTAATTTTTATGAGTTCCTTGAAACC 23815 30 100.0 37 .............................. TCTGGGCCGTATGCCCAGTCCCAATAGTCTACATATC 23748 30 100.0 37 .............................. TCTTGAATAATGTAGAACAGCTCTTGAATGATTTCTG 23681 30 100.0 37 .............................. ACTAAAAAAAAACATGGATAAAAAACATGAAAAAAGA 23614 30 100.0 40 .............................. ACTTTAAAAACATGGATAAAAAAAAACATGACAAAAGACA 23544 30 100.0 36 .............................. AAAAAAGAAAGAAAGGAGGGATAGCATGACTAAAAA 23478 30 100.0 37 .............................. GTTAACATTCTTTACAAATTCAACAAAAAAATACCCT 23411 30 100.0 36 .............................. CTCAAAAATAGGCTTTATCTATATTCTCGCTCATTT 23345 30 100.0 37 .............................. AAGAGTATCCTGCCTATAAGACAGCTTACGTATATGA 23278 30 100.0 36 .............................. TTTAATGAGTTTTAAGATATCCCTTCACAACATAAC 23212 30 100.0 36 .............................. TTTAATGAGTTTTAAGATATCCCTTCACAACATAAC 23146 30 100.0 38 .............................. TCTTCTCCGTAGCTTGCTGAGCCTGACTTTGAAATATA 23078 30 100.0 36 .............................. TTTTGATAACAAATCGTCTAAATTTTTCTGGGTCTC 23012 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 18 30 100.0 37 GTTTGTAGCGTGCCTATAAGGGATTGAAAC # Left flank : | # Right flank : AAGAGAGACTTGAAGTGAATATTAATTGATAGAAATTAGGTTTTGAAAGTGGAAAAAACTATGCCTAAAATATCTGCTTTTGAAAAACATTTTGACAGGTAGGAATTGGAACTGGAAAGTTTGCAGTACCTTTAGGTATAAAAAACGGAGTAGAACCTTCTTATCAAATGAGAAGAATTGCTTTAGAACGTGGGCTTAATGGGGTAGATGGAGTAGCAGAAAATCTTCCCTTTGAAGATAACTTTTTTGATCTTGTTTTAATGGTGACGACTGTATGTTTCGTGGATGATGTGTTAAAAGCCTTCAAAGAATGTTTTAGAGTACTTAAAAATAGTGGTACAATTTTGATAGGCTTTGTAGATAGAGAGAGCACAATTGGCAAAATATACCAGGCAAATAAAAGAAAAAAGTCTATTTTATAAAGAAGCAACGTTTTATTCCACAAGTGAAGTAGTTGAATTGCTTTACGAAGCGGGATTTAGAAATTTTAATTTCTCACA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCGTGCCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA // Array 1 1161-28 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTFL01000022.1 Dictyoglomus thermophilum strain PYS_80_B NODE_22_length_1221_cov_249.92, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 1160 28 100.0 37 ............................ ATTGGTAACAAGAATGAAGTTAGAAAGGGTAAAGAGA 1095 28 100.0 37 ............................ TTCTTAATATTTCAATAGTTTGGGAATTGTATTCCAA 1030 28 100.0 36 ............................ TTAACTCCTTTTCTTGCTCATACAAAGTTTTCCACA 966 28 100.0 38 ............................ CCAGAAGGAGAAAGCTCCTTCATAACTTTCTATTTTTA 900 28 100.0 37 ............................ CGGTAAGCTTGCTACTACGTCTGCAAGTAGTTTCCCA 835 28 100.0 36 ............................ AAAATTTATTGAGGGATTTGCCAGCTCTGGTACTAA 771 28 100.0 37 ............................ ATACCAGTCAATCAATTGGAGATTTTTTTAAGAACTA 706 28 100.0 37 ............................ CTTTTACCTTTACAACAATTTGTATACCTCAAATACG 641 28 100.0 38 ............................ CTTCCTGCTTCTCTCCAGCATCCCCTAAAACTATTTTG 575 28 100.0 38 ............................ TCGCAACTACCTTTGTATCCATGCCATTACGCCCCATG 509 28 100.0 37 ............................ TAGAGGAAAGATATCTTTCGATGCTTTCAAAATTTAG 444 28 100.0 36 ............................ GTGTGTCATCCTCCAGCAAGTGAAAAACTGGTTTCG 380 28 100.0 37 ............................ AGCGCTATGTTTTTGGAAGCCCCCAGCGGGGACTGGG 315 28 100.0 36 ............................ TCAAGCTCAGCGATAAAGCTGAGCAAAATAAAAAAG 251 28 100.0 37 ............................ ATTTGTGATGAGCTTTCTATTTCTCATACCACTTGTG 186 28 100.0 37 ............................ ATACATCGAAGTTCTATTTGAGAGCTTTTATACTCGG 121 28 100.0 38 ............................ CAGGTGGATATAGTCAGTTTTTATATGTTCCACCGATG 55 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ====================================== ================== 18 28 100.0 37 TTTAAATCCCACATAGTTCAGATCAAAC # Left flank : AATCCCACATAGTTCAGATCAAACGTTCTATTTTCAAAATGCTTTTGTTCAGTATGCTAC # Right flank : CCTTATGCCTAATATGAGCCTCCTATAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTAAATCCCACATAGTTCAGATCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [28.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 74-5347 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTFL01000009.1 Dictyoglomus thermophilum strain PYS_80_B NODE_9_length_26091_cov_142.832, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 74 30 80.0 31 AA.......T.T.....G.......A.... AAATTTTGTAGCGTTTATGTAGTGTTAACGG T [94] 136 30 100.0 36 .............................. AATAATAGCTTTTAGAAATTTTGAATGTGTTCATTT 202 30 100.0 38 .............................. TGGTTTTTTGAAGGACAAAATTTGACTCTGGAAGATCC 270 30 100.0 36 .............................. TAGTACAGAGTATTCCTGATCCTCTTGGTAGTGAAA 336 30 100.0 36 .............................. AGCCCCAATCCTTCCAAAAACATAAGAAGTTTACCC 402 30 100.0 37 .............................. CATTTGAGGAATGGAAAGAGGTAGAAAGGGAATACAA 469 30 100.0 36 .............................. AAAAGTATCTACCTTGGCTTGAAGGAACAGAAGATA 535 30 100.0 36 .............................. ATACTTCCTGATTTTCTTTAATAGACAAATCAAAGT 601 30 100.0 37 .............................. TTGAATTCCATACATCTGACAATATTAGTGCAGGAAA 668 30 100.0 35 .............................. ACTCCATTGTATTAAGCCTTACTTTGTCTCCAGCA 733 30 100.0 37 .............................. ACTAATGGATAAGGTTCATTAATTGTTAATGCATATG 800 30 100.0 37 .............................. CTATATGATTACAAGAAGGGGTAGGTGATAATATGAA 867 30 100.0 36 .............................. TGATTCCTTCCCAACCCTTTTTGAGTAAATCTAATC 933 30 100.0 37 .............................. TATAAATCAGCAGTAGGTCTTAATATTGCATATTTTG 1000 30 100.0 36 .............................. TTTTATCTTTTGCAGTAATTGTAACTGCATAAGTTT 1066 30 100.0 37 .............................. AAGAGTAGCGAGATATTTCAAATTAGAGAAAGATGCA 1133 30 100.0 36 .............................. ACCTCTTTTCAAGGAGAAATGGAACAGTATATGAAA 1199 30 100.0 37 .............................. AGTAGCATAGCTGTTTTTGATAGCATTGGAACAGATA 1266 30 100.0 36 .............................. CTATGGAGTCTGTAGGTATTTCTAGATTGCTATCTA 1332 30 100.0 36 .............................. TTTACGTCTTCTACAAAAAAGAAAGGGGGGGCGAGA 1398 30 100.0 37 .............................. TATATTGACGTTGGAGGCGGTATAAAGCTGTCTCCAG 1465 30 100.0 35 .............................. TTACTATGCCCTCTGTTGTACGCCAATACGAAAAA 1530 30 100.0 38 .............................. TCTGAGTTTTGGAAAAAATATCCTTACTCGGCGGAGGA 1598 30 100.0 38 .............................. AGAAGGTTCTCTAATTTGTCCACATCCCCCACAGCCTC 1666 30 100.0 37 .............................. TATAGTTCAACCTTTCACATTAGAGGATTTTATAAGC 1733 30 100.0 37 .............................. ACCAAGCTTATTCCATCATCCCATACATCTACCACTA 1800 30 100.0 36 .............................. CAGAAATGAAGCCCGAAGAGTTCATGCAGTGTTTCG 1866 30 100.0 36 .............................. TTGTCTTTGTCGTTGAAGAAGATACTCGGTAATTTT 1932 30 100.0 37 .............................. AAATATATCGCAAGACAGTATAAACAGTGTCGCCTTC 1999 30 100.0 36 .............................. CAATAAGCGAAAACATAGGCAGGATGAGGCTTCCCA 2065 30 100.0 37 .............................. TAGGAGGTAGATTAATATGAAAAGTAAAAAGATTTAT 2132 30 100.0 36 .............................. TTCAACAAAAACCAATTTTTTATGAAGTTTACTCCA 2198 30 100.0 37 .............................. TTTCTCCGCATCAATCGCTACAAAGAAATTGCTCTTG 2265 30 100.0 36 .............................. AGTTCATCTATATCCCCCTCTACGCTGGCTTCTGAT 2331 30 100.0 37 .............................. AATTCAATCCGAAGTTCTTCAGCCTATTCATAATATC 2398 30 100.0 35 .............................. TCATTCCCTAGCTCTAGTCCTAGCTCCTCCCCTGA 2463 30 100.0 36 .............................. CCATCATCTTCCACGATGGTTTTGTTTTTTGGGGAT 2529 30 100.0 37 .............................. ATATGGAGGTGGTAGTATGAAAATAAGAAAAGAAGAA 2596 30 100.0 36 .............................. AAGAAAGTAGTAAGAGAAGGTTCAACAATATATACA 2662 30 100.0 36 .............................. ACTATTGTATAAACTGAAATGGAACGAGTTAATCCA 2728 30 100.0 37 .............................. AGAAAGGAGAGTGATAGGATGAAAAAAGTAAAAAAGG 2795 30 100.0 36 .............................. TTCCTATACCTCAAAACCTCATCATCACTCATTTCT 2861 30 100.0 36 .............................. TTCTGGAGTCCAATAAAGAACTACAACGTATGATTC 2927 30 100.0 37 .............................. GTAGAAAATAAGGAGAGTGTGGTATTGTGAATAACGA 2994 30 100.0 36 .............................. TATGGATGCTTTGAGGTAAGGTGGCTGCAAACTCTT 3060 30 100.0 36 .............................. CCTGACGGAAGCTTTGTCTATAAAGCCACAGCAAGA 3126 30 100.0 37 .............................. TAGGAAGTGTAAGAGAAGGATTAGCCTCTATGTTCGC 3193 30 100.0 35 .............................. AGCTTTTTCCTATCTGTCTTTGCTCTCATTTCACA 3258 30 100.0 35 .............................. AAGGCTGGGGTTCTTGCTGACCCCAGCCTTATACA 3323 30 100.0 36 .............................. TAGAACCCGCAAGAGTAGAGGTGATACAAGCCTCAA 3389 30 100.0 36 .............................. CGTTATACTCAAAAAGCTCTACGATTGAATAAGCCC 3455 30 100.0 37 .............................. AGGTTCTACCTTATATTTATTACTCGGGATCTGCAAG 3522 30 100.0 37 .............................. GAGGATTTGGCAAAAAAAAGCCGGGGGACTAAGCCCC 3589 30 100.0 37 .............................. ATATCCCCAATATACTCGGGATCTGCTTTTCCCCCGC 3656 30 100.0 35 .............................. AAAAGTTCTTTGAACAGTATCCTGAATATTTAACA 3721 30 100.0 37 .............................. TTTTTATACCTTTTTATTATTTATTTTTTTATATATA 3788 30 100.0 37 .............................. CCGCTAATCCTCCAAGCTTGTTCAATACTATATTTCC 3855 30 100.0 37 .............................. CTCTTGAGCATAGAGGTAAAAGCGATTTTTGCTTGTT 3922 30 100.0 36 .............................. TGGTCCCGAGGTCTACAAAGAGTTGTTCTACATCAT 3988 30 100.0 37 .............................. TATGAGACAAGTGGAAAACACATAAGAGGAAAACCAG 4055 30 100.0 36 .............................. ATCTTCGCTCCGCTTATCGCTCCAACCCACTCTCCA 4121 30 100.0 37 .............................. GCTGTATTTATCCATGTTTGACCATAATCAATAGATG 4188 30 100.0 36 .............................. GCCAAAAACTCTTCTTTTGTATATTTGGAGACTCTA 4254 30 100.0 38 .............................. TAGGTAAGTATAAATTAGCTCTCTGTGGTATCTCTCCC 4322 30 100.0 36 .............................. TGTAGATACCCCTAGTGCTTTTGAGATATAGCTCCA 4388 30 100.0 35 .............................. TCATTTCCATACCACGCCGTATTTGTAGCATTATA 4453 30 100.0 36 .............................. TCCATACCTTTTTGAAAAAGTAGAGGAGGAAGAACA 4519 30 100.0 36 .............................. TAAGGGGGCTGATAGTATGAAAATAAAACCTAATGA 4585 30 100.0 36 .............................. CAGCTTGCAGTAGGAGAAAATAGGTTTGTTTACAGG 4651 30 100.0 37 .............................. CCTGAACCAACGGACAAAAATGCAGTTTTGGAATTTC 4718 30 100.0 36 .............................. AAACTATAATTGAACTAAAAGAACTTATTGAGAATA 4784 30 100.0 37 .............................. TCCACTCGACATAATTGTTTTTGATACTGCTATAAAC 4851 30 100.0 36 .............................. CTCTTGTAAGAAGTGATATTCTTTGACAATATTCCT 4917 30 100.0 37 .............................. AGCTCTAATTCCTTTCTACAAGTTTTTTTCTTTTTAG 4984 30 100.0 37 .............................. CAAGGTGCTTGAATCACACAATTATATATGCAATTAT 5051 30 100.0 36 .............................. GAAATTGTGCCTGCTGAGGCAAGCCTGAAATGCACC 5117 30 100.0 37 .............................. GTTCTCTCTCTTGCTCGTACAAAGACTTCCACTGAAA 5184 30 100.0 38 .............................. ATTCTTGGGAGTATTGAGGTGGTACCAAGTACCCTCCA 5252 30 100.0 36 .............................. TTGGATTTCCTTATCCTTTATGCGGTAGTAAGCCTT 5318 30 83.3 0 ........................AT.GTG | ========== ====== ====== ====== ============================== ====================================== ================== 80 30 99.5 36 GTTTGTAGCGTGCCTATAAGGGATTGAAAC # Left flank : GATCGACAGAAAAGTAATTTTTTGCATGAAATCCTCTTTACTACTTAATTTTTTTGTGATATATTATCCTTAAA # Right flank : GTCAAAATTTGACCTTTTGTGGTCTCTTGAATGTAAAAAAAAAAGAGATAGAATGTAAAAATATAAGAAGAGCAAATCTCCTTATCTTCCTAAGATCTTAAATGTTATAGGATAGTTTAATTTTTCTACCTTAGGAATCTTCACCTTTAATCCTTCTTCGCTTCTCTCAAATCCAACTTCTCCTTTTAACTCTAAAATTTCCACCTTTGCTATTTCCTTTTGATAAAGGGTAAGTTCAGTACTTAGAGATTTTATTATTACCTCATCTTTTTCTGGTTTGTTCATAAGAATTGCATAAAGAATATCTCTCTTGGTAGTAAATCTAAAATCTTTGTCGGTGTAAATAACTTCTTTTTCACTGAAAGATCCTACATTCCCTTTGGTAGGTCCTTCTCCGTAAATTCTCCAGGGCCTTGAGCCATATATGGCTTCGCCATTTATAAGTAGCCACTCTCCTATTTCAAGGAGGGTCTTTTGAGCAGGCTCTGGTATTGTACCAT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCGTGCCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : NA // Array 1 577-27 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTFL01000013.1 Dictyoglomus thermophilum strain PYS_80_B NODE_13_length_10445_cov_143.232, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 576 29 100.0 36 ............................. CACGGGGAACAAGGAAGCAAGAAGGATTATAGAGGC 511 29 100.0 36 ............................. TAAGTTAAGGATTATAAATATCATTTGTGGTAGTCT 446 29 100.0 37 ............................. ATAATGCTTTCTTTCAGAACAAACGTGTACTTCATGC 380 29 100.0 35 ............................. GAACACTTTGAAGTTTTGCTAATATTCTCCTTCTG 316 29 100.0 36 ............................. TCTTAACAATCTCAAGGAGGTGAAGGCGTGAAAGAC 251 29 100.0 37 ............................. ACATGGGACGAGTGGAGGAAATTCTGGGGCAAAGTTA 185 29 100.0 36 ............................. TAGCCAATTCTCTTGGATCTGACCCCTGAGCAATAC 120 29 100.0 36 ............................. AAGCTCTCTTGATTTGTTGAGATAATTTCTTACTTA 55 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 9 29 100.0 36 GTTTGATCTGAACTATGTGGGATTTAAAT # Left flank : TTAAAAGCCTGGTGGTAATAGTGTTTGTAATTGTAACCTATGACATAAACGAAAAAAGAGTAGACAAAGTTAGAAGAATACTAAGAAGATACCTTAGTTGGGTACAAAACTCAGTCTTCGAGGGTGAAATAACTATTGGAAAATTAGAAAAGTGTAAAAAGGAATTACAATTCGTAATAGTACCTGAAGAAGATTCAATCTATTTTTATATTATCGAAAATAAAAACAACTACATAAAAAATGTGTTAGGAATCGAAAAAGATTTAGACTCTTATGTTTACTGACTTATTAATCCGCAAACCTCATTTTATAACTCTCTTGGAAAAATACCTTAAAAAATCAGGCCTTTTGTTAAAAATTTTGTACCTACAAAAAATCCTATCCAGGGGTTACTGCAAAAAATTCTCTTACAAGAGTCTATAATCATAAGAATTTTTAAGCAAAAACAAAAGTAATTTACTTATGTTATAATTAAAAGTACTCATAAATATTAACGCTGG # Right flank : TTCTTTTTTCTTTGGTGTTGTTTTAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGATCTGAACTATGTGGGATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 75-2973 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTFL01000016.1 Dictyoglomus thermophilum strain PYS_80_B NODE_16_length_2998_cov_111.885, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 75 30 80.0 31 AA.......T.T.....G.......A.... AAATTTTGTAGCGTTTATGTAGTGTTAACGG T [95] 137 30 100.0 38 .............................. CTGAATTCCCAATCGCCTGCACGATAGTCGCATACCAT 205 30 100.0 37 .............................. CAAGGTCCCCAAAGTAGTACTTATCTTTGTAAATCAC 272 30 100.0 36 .............................. CTTGCTCTGTATGTGTACTCTGCTATTTCGCCTAAA 338 30 100.0 38 .............................. GTGCTTCGAACTCTTGCCCAAAATTATGGTCATAAACA 406 30 100.0 36 .............................. TAGATTCATAATGATATCTTTTATTGTTCCAAACGG 472 30 100.0 36 .............................. ACTCTCTTGCCTCATCTAAAGTAATTTTTTGATAAG 538 30 100.0 36 .............................. GAGGTTTTGTTAACAAAAGAAGTAAAGGAGAATGGA 604 30 100.0 36 .............................. AAGAATATACAGAAGAAGAGCTTAAGGAGCTATTCC 670 30 100.0 36 .............................. TTGTTGATAGTATACGGGCTATAAAAAAGTTTCCAA 736 30 100.0 36 .............................. CATTCTCTTTCCTCTAATTCGATTTCTATTATCAGC 802 30 100.0 36 .............................. AATCCATCTCTGGTCTGAATATTGTATTCATCTTCT 868 30 100.0 36 .............................. TAAACTCTTTAACATAATAATTAAGGTTTGCAGTTT 934 30 100.0 38 .............................. TTGTGTATATTTTTAACCACTAGAATAATTCTTTTCCC 1002 30 100.0 37 .............................. ACCTCTTTTCTTATTGTCTCGTTTAAATCCGCAACTC 1069 30 100.0 36 .............................. AAGAGAAAAAATAGAAAAAATAGAAAAAGACTTGAC 1135 30 100.0 36 .............................. TCCGCTTGACTTCGTGGCATTTGATACGGCAGTAAA 1201 30 100.0 37 .............................. TAGATTTCCCATATAATTTTCGACTATAAAATCTCCA 1268 30 100.0 36 .............................. GATGCGATTACAACGTTATTAAAGTTTATTTTCTTT 1334 30 100.0 37 .............................. ATGTATAGCCCAGCCACGGAAGAGAGACCGCATAAGG 1401 30 100.0 35 .............................. AGATAAATTTGCAAAATAAGGGGTAGGGAAACCTG 1466 30 100.0 36 .............................. CTATATAGGATACGGGCTATAAAAAAGTTTCCAATT 1532 30 100.0 38 .............................. AATAATACTTGCACTCCTCTTCCAGCCCATCGCCGAGA 1600 30 100.0 36 .............................. TTTCTTTATGTAATTCTCTTGGGATGTAATATTCTC 1666 30 100.0 40 .............................. ATTTATCTCCCTGCAGATGAGGATGGATACTTAATAAAAG 1736 30 100.0 38 .............................. CGCTCCCCCCGGAGAGGGGCACCCTATATGCCCTTATG 1804 30 100.0 38 .............................. ATCTTTATTATGTTGTCTACAGTAAGAATAAATTGAAG 1872 30 100.0 36 .............................. CTCCAGCAATTACCTCATCGAACATATTTAAATCTA 1938 30 100.0 36 .............................. TTGTTTTTCTTCTAACCTCTCTAATTCTTTTTTATT 2004 30 100.0 36 .............................. GGCAAAAAACAAGCAAAAAGCAAAAAAGAAAAAAGA 2070 30 100.0 37 .............................. ATCTAAAATCCGAATTTCAAAATCCAAATTCCAAATC 2137 30 100.0 38 .............................. AGATATCTTCCCTCTAACATCATTCTATCAGCCTCCCT 2205 30 100.0 38 .............................. TGGGAGGAGGTGGTAAGAGAATACAATAAACTTGTGAG 2273 30 100.0 36 .............................. TTTTTCTATCCTTGCTTTTTTTATTTTTATTTTTTT 2339 30 100.0 37 .............................. TCAGTAATGTCTTGATGGAGGAGATAAGGAAGCGACA 2406 30 100.0 36 .............................. TCTCTAGTTTAAACACAAGTTCTACCTCCTCTACAC 2472 30 100.0 37 .............................. AAGGAATACGTTTGGGAAATAGCAAATGTAAGGAACA 2539 30 100.0 37 .............................. ATGCATAGGGAGAGATTTAAAAGTGGTATTCATAAGG 2606 30 100.0 39 .............................. CCTTCCCATATTCTTTCTTTTTCACCTCCACTATATGGT 2675 30 100.0 37 .............................. ATTTGCGAGAGTGGTTGATATTCTGTGCCCTTTATTA 2742 30 100.0 36 .............................. TAATTTTTTGTAATTGATTTCTATTATAAGCAATAA 2808 30 100.0 38 .............................. TGTTTTTCAAGAAAGTTTTGCAGGTATAAATGAATTAT 2876 30 100.0 38 .............................. ATTCTTTGAAGCTCATCATAAGCGTCAAGAAGTCTCAG 2944 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 44 30 99.5 37 GTTTGTAGCGTGCCTATAAGGGATTGAAAC # Left flank : GATCGACAGAAAGGTAATTTTTGGCATGAAATCCTCTTTACTACTTAATTTTTTTTGTGATATATTATCCTTAAA # Right flank : GCGCATACACATTTTCAAGGGGTTT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTAGCGTGCCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : NA //