Array 1 203-52 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDHA01000273.1 Bacillus toyonensis strain G25-92 G25-92_contig000273, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 202 29 100.0 32 ............................. AGACCGACATGCGGGTGGTCGTCATCCCGTAC 141 29 100.0 32 ............................. CCGCGGCGCGTGCATCCTCCACAGTCCCGGAG 80 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 GTGTTCCCCGCCTACGCGGGGATGAGCCC # Left flank : CGC # Right flank : CGAGGACGAGATGGTCAAGAAGACCGCCGTCCGGTGTTCCCCGCCTACGCGG # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCCTACGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCCTACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [28.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.01,4.5 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 1 1406-35 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDHA01000555.1 Bacillus toyonensis strain G25-92 G25-92_contig000555, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1405 29 100.0 32 ............................. TTCGCGAGCAGATCGAAGACCACGACCGCCTC 1344 29 100.0 32 ............................. TGAGCGACGATCCCGATCAGGTCGAGCGTGGA 1283 29 100.0 33 ............................. CACCTAGGAGACACCATGACTGTTGACCCCATC 1221 29 96.6 33 ............................G TGGGACAACGCAGCCATGGACGAGCTCGCGCGT 1159 29 100.0 32 ............................. CCGAGGTGCGCCGCCACCGCTGCCACAAGTGC 1098 29 96.6 32 ............................G CGCGAGTCCACGCCCATGAAGAAGCGACCTGT 1037 29 96.6 30 ............................G CCCACAAGGGTGCTGGCGGTGTTCGTGCTT 978 29 100.0 32 ............................. CGCATGCCGGAAGCCGTCGCGAAGTCGACCGC 917 29 100.0 32 ............................. TCGACCGTGTCGGACTCGGTCTGGCGGACCGA 856 29 100.0 32 ............................. GCCTCGCCCCCGGCTCCGTCGAGGGCGACGGC 795 29 100.0 32 ............................. CCGCCCCTCCTCCCCCGTGCTCCTCGTCCACG 734 29 100.0 32 ............................. TGGGCGACGATCCCGATCAGGTCGAGCGTGGA 673 29 100.0 33 ............................. CTCTCGATCCCGTGGGCGCGGACCCTCGTCACC 611 29 100.0 32 ............................. GCCGACCCGACCTCATAGGAGACCCGCGCCGA 550 29 96.6 30 ............................T CCAACTGACGGCGACCCGGGCTCGGGTGAC 491 29 100.0 32 ............................. CGGGACGCACCGCCCGCATCGCCATAGGTCGC 430 29 96.6 33 ............................G TTGTCCGGGTCTTCCTGGAGCTCCGGGTAGGTG 368 29 100.0 32 ............................. CGCAGCCGTTTGAACATCTCCTGACCATCGAG 307 29 100.0 32 ............................. TCCGACCACAGCCCCGACCGGGTGCCGTCCCT 246 29 100.0 32 ............................. AACGCCTCCGCTGCGGGCATCTCCATGCAGGA 185 29 100.0 32 ............................. GAGACCGTGAACCCGGATCCCGACCCCGAGCC 124 29 100.0 32 ............................. GCGAAGGACATCTGGTCGACGCGGCGTCCCTT 63 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 23 29 99.3 32 GTGTTCCCCGCCTACGCGGGGATGAGCCC # Left flank : CCGCCTGCCCTCCAGGACTGCGAGGATTTCTCACTCGCTGGCTTCTGGAGATCTCCGCAGGCGTCTTCGTCGGCAAGGTCAGCAAACGTGTGCGTGAGCTCCTCTGGGCACGGACAAAGAAGATGGTGCGCACCGGGCGGGCCATCATGGTCTTCCCTGCGAGGAACGAGCAGGGTCTTTCATTTCTCGTGCACGGCCACCACTGGGAGCCGGTGGATATCGACGGCATAACGCTGATGCTGCGACCGTCTGAGTCGCGATCGGCGCGACCGGGGCCGGATACCCCCTCGCGCGCAACCGGCTGGAGCAAGGCGGCACGCCGCAGGAAGAACACCTGAGGCAGTTCCTGCCGACACCTCCCGCAACGGGTTCTCAGACAGCAGACAACGCCAGGCACATCAGCCTGGTCGTGGAGAATACCTATGCGCGGCCGAGAGCGTGCGCCGATGAAACTGATACAGACCCCATCCCTCCCGCCTCTAAACTCCTGATCAAGAAGT # Right flank : CGGGGTGTCGGCGGGGATGGCGCCTCCGGAGCGGT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCCTACGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCCTACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [11.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //