Array 1 62-485 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAXCQ010000020.1 Arenibacter sp. 6A1 Scaffold20_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 62 46 100.0 30 .............................................. TCGTTTTCTTACCAATATAGCAATGGGAGG 138 46 100.0 29 .............................................. CCATCCCTTATACAAATCCAATCATCCTC 213 46 100.0 30 .............................................. TTTTGCGTCAATTTTGTAAATCATTTCCGC 289 46 100.0 29 .............................................. TAAGCAACCCCCAGAACATACCCCAAGAG 364 46 100.0 30 .............................................. AAGTGGCGGTACAATTTACCGAGGGAAACT 440 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 6 46 100.0 30 GTTGTGAATTGCTTTCAGTTCTTTAATTTTAGAGATTATTCACAGG # Left flank : CAGTTCTTTAATTTTAGAGATTATTCACAGGTGGTTTGTCTGCCAATTTTAATGCTATCGGG # Right flank : GATACCCGCTATAACTAGCTGGTATCCTGTTTATTACATCATTTATTAGGATTTAAAAACAAGGATCCAATGCAACCCCTTAACTACCAGCTACCTATGGTTTTTATTTCAGAACAATTCTAATTGCTGTCCTGGAGTATCGGGTTCCACTTCCGTATGACCATGAAAGAGCTCAATCATCCCAAACTGTTTGTCAGTGATTTGCATAATACAGACTTTTCCCTGTTTAGGAAGGTTGCTTTTGGTTCGCTTAATATGTACGGCTGCATTTTCCCTACTGGCACAAAAGCGTAAGTAAATACTAAACTGAAACATATTAAAGCCATCGTCCAACAGGATTTTCCGGAACCTAGTCGCTGCCTTGCGGTCCTTTCTGGTTTCTGTCGGGAGATCAAAAAATACAAGTACCCACATGCTTCTATATTGGTTTAAACGCGAAAAATGGTTCTGGTTTATCATTTAGTACTACTAATGCACATTCCTTTAAACGCCCTTAAATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAGTTCTTTAATTTTAGAGATTATTCACAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAGTTCTTTAAATTTATGGATGATTCACAGG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.30,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 1016-62 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAXCQ010000012.1 Arenibacter sp. 6A1 Scaffold12_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 1015 46 71.7 30 CCAAAA...C.AA.......TC.........AG............. TCCATGTGAGTAGTGCCAATTAGATTATCG 939 46 100.0 30 .............................................. TTCTACATTGTCGGGCAGTTCGTCAAAATA 863 46 100.0 30 .............................................. ACGGCTTTTTTTGGTTGTAGTCATTAGCTA 787 46 100.0 30 .............................................. ACTTGTTTGATTATAATTTTGACGGTGTAG 711 46 100.0 29 .............................................. GCTTATTGGCCTATATTGGCAGATCTTTA 636 46 100.0 29 .............................................. GGCACGGGCCGCGATGGGGACCTGTACGT 561 46 100.0 30 .............................................. GGGAAAATCAATATACCTTGCTTATCATCG 485 46 100.0 30 .............................................. GTTGACAACTGAAAATTCATATCCTTTATA 409 46 100.0 30 .............................................. TCATCATCGGATTTGTCTGGCCGGCAACTT 333 46 100.0 29 .............................................. CTACCGACAACAGAAACAGAATCTGCTAA 258 46 100.0 30 .............................................. AGAAGCCTTGGTACAGAATGCAGCTTCTTT 182 46 100.0 29 .............................................. CATTGCGTTGTAATAGTGCCACGTCTATA 107 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 13 46 97.8 30 GTTGTGAATTGCTTTCAGTTCTTTAATTTTAGAGATTATTCACAGG # Left flank : AGTTCTTTTCGAGATCTTAAATCTAGTTCTGATTTCTGTAGACGTAAGTTGAAATTTAGTGCTTAATTTTCCAGAGTCAGTTGTTAATAGATTAAATTCTGTTGAGTTTTTAAAATATGATTTGAACTGATTTTGTAATTGAATTCCAGAAATTTTGTTTTCCATTTAGATTTTTTGTTAATCAATTTTATCTATTCTAGTTCCTAGTAATTAATGCCAACTATGTTATATCCATTTAACCTACAACTGTTTATCGACTTATTACTTTGGATAAAAGTAATAATACGGTACAGTTATCTGGTTATAAACGACAGGAGCAATATTAAAATTTAGGTAGGTAAATTACAAATAAATTAGAAAGAAAAAACAACAACTTATGCAAGGAGTAAAATAGAAATTAATATAACTGTTGTTGTCTTACGAGGGCTTGCCACAACTTTAGCTGTTGTGAATTGCTTTATCTCATCTCATGCTTATTTCCTTAGGAATACGATGAATCA # Right flank : GGTACCTAACGGGCAACATCTTAGTAGGTATGTTGTGAATTGCTTTCAGTTCTTTAATTTTA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAGTTCTTTAATTTTAGAGATTATTCACAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAGTTCTTTAAATTTATGGATGATTCACAGG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //