Array 1 99771-98296 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHHB010000012.1 Texcoconibacillus texcoconensis strain DSM 24696 Ga0415234_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 99770 30 100.0 37 .............................. TACTGCTATTGATGAGCAATGCTTCATCAAATTTATT 99703 30 100.0 37 .............................. TGCCTAATGAGCCTGAGAATCATAAACATATCTTTTG 99636 30 100.0 37 .............................. TTCCAATGAGATTATACGAATCTAAAAATGATTCATA 99569 30 100.0 36 .............................. AACTAATGAGTGAATCATCAATGATTTTTGCATCAA 99503 30 100.0 38 .............................. ATATAAGCAGACATACTACTGCATATTACGAAACTTAT 99435 30 100.0 37 .............................. AGCGATCTCCGTACTGATGCACCAGCGAAGTTATCAG 99368 30 100.0 38 .............................. GACTTTCATGCACGGTTACATACTCAAACCTCGTTTCT 99300 30 100.0 35 .............................. CCCCCTTTTACTATGACCCCATGTTATAGGGGTTG 99235 30 100.0 35 .............................. GGATAAACAAAAAAGATGCAACGGCATTTCGCGAA 99170 30 100.0 36 .............................. CCGAAATACTTTTCGCCTTCCTTCGCGATGATTTCC 99104 30 100.0 36 .............................. CGCTAAAAACCAATTCCGCATTGATTCAGTTACTCG 99038 30 100.0 36 .............................. TGTCGATATGACTAGCTAGCTTGTACATCTTTTCTT 98972 30 100.0 36 .............................. TTGAAAATGTCGGCTATTTTTTCGAACCCTTCGCCA 98906 30 100.0 23 .............................. GAATATAAAAGATTTCAGACCTT Deletion [98854] 98853 30 100.0 36 .............................. CGGAGAAGAAGGCGGCGCTTGCTACGTTGCGTGCGC 98787 30 100.0 35 .............................. CTAGATTTAGTCTCTGAAGGGATACGGATCTGCTG 98722 30 100.0 35 .............................. ATCGTACCAATGATCGCCGAACACAAATTTCAACA 98657 30 100.0 35 .............................. TGAAAAATGTGATTCTAAGAAAGTTGAAACACGAG 98592 30 96.7 37 .............................C AAAAAGAAGGTGTTCTTGATGAAGATCGATGGAGCCC 98525 30 96.7 36 .............................C ATGCTCTGCGTTCTAATACATCAGCGATCGCCAACA 98459 30 100.0 37 .............................. CGGGATCGGCTTCAGATGCAAATGATTCAGTTGCGGG 98392 30 96.7 37 .G............................ ATACTAACTCGCAAAGGTAATGTAAAGAAGCCTTTCC 98325 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== ====================================== ================== 23 30 99.4 36 GTTTTGATCTTACCTAAAAGGAATTGAAAT # Left flank : GGCAGGTGAGACTAATGTTCGTCATTCTTGTCTATGATTTCGCACAAAAACGTGTAGGGAAAGCATTGAAGATTTCTAGGAAGTACTTGCACTGGGTACAAAATTCAGTTTTGGAAGGTGAAATTTCAAAAGCAAACTATACAAAATTAAAATTAGAGCTTGAAGGGTTAATGGATCCTGATGAAGATTCGGTGATTTTTTACACTTTTAGAACATTGAGCTATTCAAAGCGTGAAGAATTGGGGGTTAAAAAGGGTGGGGATGAAAATATCATATGATTGATCCCATAGGCAATAAATTATATTTGTTCAGTTGTCGTCGGTCTCTATTAGAACAGCACTCCCGGGGGATCGACGACAAAATGAGAGAATGAGTAACTAGGAGAATACATCTGTTTACAAGAGAAAAAGAGCGGTTACAAAGTTTTGAAAAAGAATTAAAAGTTTCAGGAAGGAATTTCTTATTTATTGAAGAAGACTGTTGTTATGCATGAAATTGGG # Right flank : ATCCCTCGTATGTTCTCCGATTGGAGCCGGTAGGTTTAATTCTTATCTAAGAACCTGACCAAGAAGAATTGATACGCTTACGAAAAGAAAACCAACAGCTTGCAATGGAGAATGATATTTTAAAGCAAGCGGCGCTGATCATGGGACGAAAGTAGATGTGATTGGAAATAACAATCACAAGTATTCGGTATCAGCAGCTTTTCTAAACCGAGTAATCATGTCTCAAATCCTCAGAGATATGCATTATTAAAAATCAAAACATTTTCTCGCCTCGTATCCCTTTCCACATAGCCCACTCTTCAAATTAACCTTCTACCTTAGCGACGCCTAACGCTAGATGCTCCCATAATACCTCTTCTACTTTCTCTACTAGCTCATTGGGGCATTCTACAACTAAAACAACTTCTGACTTTTTCCCTTTCACTTTTCTCTTTCTTTTATGTATGACTTTATAAATGATGTAATCAATGATAAAACCTAAAATAAAGCCAATAGCTCCA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGATCTTACCTAAAAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 2 111025-110726 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHHB010000012.1 Texcoconibacillus texcoconensis strain DSM 24696 Ga0415234_12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 111024 30 100.0 38 .............................. CCGTAGCTATAACATCTCCACGATGCACCGACAACCCG 110956 30 100.0 36 .............................. CTCCAATTCTTCGCGGATGTCGACGTCTAATTGTTC 110890 30 100.0 37 .............................. ATGTCTGCAATGAGTGTAATCGGTTCGTAGTCTTCTT 110823 30 100.0 38 .............................. TATGAAAAACGTGCCGTAACTGTTGATAGTGGTGATCT 110755 30 86.7 0 ................A........T..TG | ========== ====== ====== ====== ============================== ====================================== ================== 5 30 97.3 38 GTTTTCATCTTACCTATGAGGAATTGAAAC # Left flank : TTCATCATTGTTTTCACGGATTTTTGATTCGTAATAATACGTACTTCTTGGGATTTGTAGGACGTCGCACATTGCTGATACCGAGTATTTGTGACTGTTATTTCGAATCACATCTACTTTCGTCCCATGATCAGCGCTGCTTGCTTTAAAATATCATTCTCCATTGCAAGCTGTTGGTTTTCTTTTCGTAAGCGGATCAATTCTTCTTGCTCAGGTGTTCGATTATCTTTCTCTTCAAAAGAACCGCTCTCTTGATGTTGTTGAACCCATTTATCAAAGGCAGATGGCGTCAGCTCGTATTCTCTGATAATTTCGGCACGTGGTTTTCCTGAAGCATGTAATTGAACCATTTGTTCTTTGAATTCTTTGGTAAAATGACGTCTTACTCGTTTGGTCATGATAGAGTCTCCTAAGTTTTTATTTGAACTAAGTATATATGACCTTAAGCAACCTGTCCAACCTAGTGTAACCTATCCAATTTTATCAGTGATAACGAAAAA # Right flank : ATATCATCGAATTCTTTCTAAGCCTTAGGTCGCAAGTTCGGTTATCTTATAAACTTGAATGAATTTCATAAATCTGAGCCCTTTGGGCTCAAGGGTTCTAAGACATAAAAAAAGGAGCACCTCCCCAAATGTCGAATTTAGTAAGTAGCCACAAACTAAACCAAATGGGAGGGAACCCCTCATGTCTATTGTACGACAAGAGAGTCTGTTTAGTATAGAGGTTTTATATGAATTAGAGCCTACCCAACGTTATGATGAAGTTTTTTCATCAATAAATATTGCTCCTATGGTTAACGTTGTTGCTAAAAAATCCCGGTTTGGACGCCCTGTAAGCTTAAATTACCCTGCAATGATTCAAGCACTTGTGATCAGAATTGTAGAAAGAATTTCTGAAATTAAGCTCCTAGTGAAGCGTTTGAAATGGGACCTTCAATTCAAATGGGACTGTGGTTTCCTTATTTCAGACTCTGTTCCTTCAGAGTCGGCTTTTTCAAGGATGA # Questionable array : NO Score: 8.92 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 1406-111 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHHB010000003.1 Texcoconibacillus texcoconensis strain DSM 24696 Ga0415234_03, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1405 30 100.0 35 .............................. ACCACTTGTTGCCCCCATCTTCAATAGATAAGATT 1340 30 100.0 36 .............................. AATTTATTCTTAGTAATTTTTGTTCGTTGATTGTAG 1274 30 100.0 37 .............................. CGGGTTTTCCCGTATAGATGTATTACCAACGTCAAAC 1207 30 100.0 38 .............................. TTCGATAATTTCGATGTCTTCACGCGTTATGTCTTCGG 1139 30 100.0 36 .............................. GTGTCTACATATGCAAACAAAGGTTTTTCGCCATTA 1073 30 100.0 36 .............................. ACCATCAAAGTCTGCGGCTGAATGTTGGTCGTATAG 1007 30 100.0 37 .............................. ATCCGTAAAGAAGAAAAAACGTGGGGGATTGATTATA 940 30 100.0 36 .............................. TCCGCAACAATGTCCTCAGCTTCTGACCATTCGTCC 874 30 100.0 35 .............................. AGATAAAACAAGATGTTCTTGATAGCGGTAGAGTT 809 30 100.0 38 .............................. TGATTATGCAAAATTCCAGTGCTGATGAAAATGGCAGA 741 30 100.0 37 .............................. CAGCACTCTAAAAACTCTTTGGCTTCGTCTTTATCCC 674 30 100.0 36 .............................. CTCTTTCGGTCAGTGTGCAGAGATAGCGCGTCCTCT 608 30 100.0 35 .............................. CAGCTCCTCGAACGATAGCATTTGCGAACTCTTCC 543 30 100.0 38 .............................. GATCCTCTCCACATGCAACCTTTAGGCGTAGAGTTAAA 475 30 100.0 36 .............................. TGATTATGTAGAAGGTGATGAAAGCATTCTCGAACA 409 30 100.0 38 .............................. ACCCGATGGGTACGGTGACAGGTCGGTTCAGTTCCGGA 341 30 100.0 38 .............................. TTGCGCTACATTCCGCATTTAAGTTGTGCGCCGCAATT 273 30 100.0 37 .............................. TTGCGAACCGGGACGAAAACCCATCGCGCCTTCTTCT 206 30 100.0 36 .............................. TGCCTAGCGATTTCCTCGCCGTCCTTTTCGACGATT 140 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 20 30 100.0 37 GTTTTCATCTTACCTATGAGGAATTGAAAC # Left flank : TACGATTCGTACGTTCATCGTTCGCGACGGCTTTTGGGACCACGAAGACTATGAATATACGTACGTCACATTAGGATACGTGCAAGAACCAGCAGAAACGAGCCGCGTCGAAATCGAATACGAACAGATGGGCAACTTCGTCGATGTTGAAAATGATGCATTCATCAACATCGCCCATAGCGACGAAGCATGGAGCGAAAACCATCCAATCAATTTCATGGCAGATGACGGCACAGTCATCGGAGAGTATATGAGAATGGAGATGGAGACTGGGGCGTTTTGTCATTAAAGGCGAAGCTACACAATTATAATAATGTCGTCGATCTCTAGTTGAACAATAAATCCAGGGGATCGACGACAAATAGGAAAAAGAAGAAAAAAAGAAAATGTGGAAGGTTTTTAAAGCAAACCTATTATTATAAAGCTTAAACTTTGATTGAAAATTTCAGGAAGGATTCTTTTGGTCTATAAAGAATACCTATATTAGAGGGAAGTTTGGG # Right flank : CACCACTGTTTGCGATTGGAATGTCAACACTAAACTGAACAATTTCTTTAAGGTACATTTACTTTTTAAAGAGCTAATAAGTTATGAATCTTCATTTGAAAATGATGCTAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCATCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //