Array 1 24130-25418 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRVX01000068.1 Pseudomonas aeruginosa isolate C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 24130 28 100.0 32 ............................ ACACGGGTGACTATGCGTTTACTAGCCATAGA 24190 28 100.0 31 ............................ GCTGCCGGACGAACGCACGGCGCTCCAGGTC 24249 28 100.0 32 ............................ TCGACGTGCTGGATATCCCTGCTCGCACTCAG 24309 28 100.0 32 ............................ TGCAGCGATTGCACCTTGGCCTGCTGCCGATC 24369 28 100.0 32 ............................ AGGCCAAGGCACATTCAGCGTCGCCGACCCGC 24429 28 100.0 32 ............................ ATTGGACAGCACTACCCAGCACTCGGCAGGCT 24489 28 100.0 32 ............................ ACTGTATCGCCGCAAACGAGCCCGTTCTGGCA 24549 28 100.0 33 ............................ AGTTGATATCAAGATGCCGTGCGGCTCTGTATT 24610 28 100.0 32 ............................ TCGCCCATCAGCCAGATGCAGCGCAGCGTCAA 24670 28 100.0 32 ............................ ATCCATAGAGCACGCTGTTGATGCGCACATGG 24730 28 100.0 32 ............................ ATAGAGGCCGAAGCTGTAGCCGGTGAAATCAA 24790 28 100.0 32 ............................ ACACCAAGAGTCGCGGCGACAACTACCAGACG 24850 28 100.0 32 ............................ TGCGGACCCGCGCCGAGCAGATCGCCGCGACG 24910 28 100.0 32 ............................ ACTGGAGACGAGCGCATGCACGACCCTTTCAA 24970 28 100.0 33 ............................ GACCAGGGCGTCGACAGCCGCAATCTCCATGGC 25031 28 100.0 32 ............................ TGGTAGGCCGAGCGGACAAAGGCGGTGGCGTG 25091 28 100.0 32 ............................ GTGTCGCCCAGCACCGTTCAGCGCTACTTCAT 25151 28 100.0 32 ............................ TGGTTCCGGCTCAAGCAGCGCAAGGAACTGAG 25211 28 96.4 32 ..............C............. TTGGGCTTGGGAGTGCTGCAGTTAGACCTGCC 25271 28 100.0 32 ............................ AGCAGTTCGAATTCGTCATCCAGTTCTAAGGT 25331 28 92.9 32 .....................A..A... TGTCCCGAAGTTCATAAGCGGGCTTCGGGCGA 25391 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================= ================== 22 28 98.4 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTGGGGGTGGATTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGATCGCTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGTTGGAGCCCTTGGAGCTTGGAAGGTTGATGGGGTTTTGGTCTA # Right flank : ACGGCCAGCAGCCCTGACGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGTCACCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATGAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGAAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGTTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGACGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGCTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 35822-34292 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRVX01000068.1 Pseudomonas aeruginosa isolate C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 35821 28 100.0 32 ............................ GCAAGGGGCGCTTAGGTGACCGAAGGCTGAGA 35761 28 100.0 32 ............................ ATAGACATAACTCCCGTCTGGGTCGGTAGTGA 35701 28 100.0 32 ............................ TCTAACCAAGCTTCGACCCTGCCAGGGCCTCG 35641 28 100.0 32 ............................ TTTCGGCGGAAATTCAACCCCCTGGAGACATG 35581 28 100.0 32 ............................ ATCCCGATCTGGAGCCAGGTGTCGTAGTCTTC 35521 28 100.0 33 ............................ TTGGCAACGACGATCTGCGCCCATGCTTCGAGG 35460 28 100.0 32 ............................ CACTAGGGTACAGGACTGTCGAAAGACTGCGC 35400 28 100.0 32 ............................ TACAAGGACAAGCAGAAACACTACGAGTGGCT 35340 28 100.0 32 ............................ TGATGTCCACTCGCAGTTTCAGTGATGATGAT 35280 28 100.0 32 ............................ CGGAGCAGGCATTGCGGGTGCGGGAATGCTGG 35220 28 100.0 32 ............................ ATTCGAATGAACTCCATGCTCATGGCTCCTCT 35160 28 100.0 32 ............................ CGGCGGCACCACCTGCAGCATCAGCGCACTCA 35100 28 100.0 32 ............................ CAGACCGGCATCGAGGCGCGTCGCGGCCATCG 35040 28 100.0 32 ............................ ACTCTGCGCCAGAGGTCAGCACCAGAAGATCA 34980 28 100.0 32 ............................ TATAACGATATTGATGCCGGATTTAGGCCAAG 34920 28 100.0 32 ............................ AGGTAGACGTCCTCGCCCACACCGATGTCGCG 34860 28 100.0 32 ............................ GCCCAGGCACGTTTGCTCGCGCTTTGATCTCA 34800 28 100.0 32 ............................ GAAAAGAGTTGACTGCACAGTGGGCATCACCT 34740 28 100.0 32 ............................ AATTGCAGGTGACCGACAGGCTTGCGGTACCA 34680 28 100.0 32 ............................ AGCTCGGTCGCCCCGGGGCGGCCGGCGTAGTA 34620 28 100.0 32 ............................ AGGTCGGGGATGGATCGAACCACCCGCGCGAC 34560 28 100.0 32 ............................ GTGCCCGGGGCCGACTCCGAACCCGACGAGCA 34500 28 100.0 32 ............................ TTGTCGCTGATATCGAAGGTGTCCCACTTCCG 34440 28 100.0 32 ............................ AGTAGCCGTCGGCGTTGTGACAAAGCCATTCC 34380 28 100.0 33 ............................ GCACGGTAGGTGCCGGCGCCCACGCCGGAGGCT 34319 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 26 28 100.0 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGTGGCATCGCCCATCACAGGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGTAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : CTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCACTACCAAACATCCGAATATAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCTACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGACAGGCCACGGTCAACATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACGGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //