Array 1 9007-11723 **** Predicted by CRISPRDetect 2.4 *** >NZ_FPBS01000054.1 Aliiroseovarius crassostreae strain DSM 16950, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 9007 29 100.0 32 ............................. CCGGGCAAAACCACCGAAGGGAAAGAGACATG 9068 29 100.0 32 ............................. AACGTCGCTTGCTCTGCGGTCTCCGATGGGCA 9129 29 96.6 32 ............................T GCCTTCATGCAGGTGATCCGGTCCCGTGATGA 9190 29 100.0 32 ............................. ATTCCGCGCTCTTCCGGCTGGAAAGCTACCCC 9251 29 100.0 32 ............................. TAATCATGCACACCAGTGCGCGCCACCCTTGA 9312 29 100.0 32 ............................. GGGACTAACGGCTCTCTTATCCTCGATATGGA 9373 29 100.0 32 ............................. ATAACGTCTTTTGTTGCCAGTCTTCATCCTCC 9434 29 100.0 32 ............................. CTCATGGCGTGGGCGCGCTGGGATGGCATGAA 9495 29 100.0 32 ............................. GTTGATGGAAATAACCACAAGATCATTCAGGT 9556 29 100.0 32 ............................. TGGTGGGTGGCTCCGGTAGTGGCATCCAGTGG 9617 29 96.6 32 ............................T CAGGCCACCGTCAAACAGATATGGCTGATTGC 9678 29 100.0 32 ............................. ATCCAATCGGCGTTCGTACCATGAAGGCCGAG 9739 29 100.0 32 ............................. CGCCAGATCTATTGGTGCAGGCCAGGGCTTTC 9800 29 100.0 32 ............................. GCGGACGGTAAAGCCCTGCTGTCCGGTGACGT 9861 29 100.0 32 ............................. GGGCTTCCATCGGTAGGAATACGTTTCCAGTT 9922 29 100.0 32 ............................. TCTACCCGGCATCATATTGTGGTTGGTACGCC 9983 29 100.0 32 ............................. GGTTTTTGAGTAACTGGCATGGATAAACTCAC 10044 29 100.0 32 ............................. GTCAGAGATTGACCCGCCGCAACCGGAATGCC 10105 29 100.0 32 ............................. CCACTCGCCATCACGCATGACCTCAGACCCGA 10166 29 100.0 32 ............................. ACACCTGATCTGCAATAGCACGGAGAAGCCCC 10227 29 100.0 32 ............................. GCCTGTTTTTAGGTGTCTTTTGATGCTCACTC 10288 29 100.0 32 ............................. TAAAATATGTCATTTTGGGATCTGAGCGACGG 10349 29 100.0 32 ............................. AATATACCGGCAACGCTGTTTTTGATCGCAAA 10410 29 100.0 32 ............................. CCTGTTTCTTCAGCTGCCGGCCGGCCACTTTC 10471 29 100.0 32 ............................. CACTATGCCCTTGACGGAGTGATCGGCGGCAA 10532 29 100.0 32 ............................. CCACTTAGCATAATCAAACCATACAAGCGCAA 10593 29 100.0 32 ............................. ATGGATACATGGCAGCAAGCAAGGTGGGAGAG 10654 29 100.0 32 ............................. AACCATCGTTCATTTCAACGAACCAATCCCCA 10715 29 100.0 32 ............................. GCCGCTGCTGTTGCGAGGTGTTCACGCGGGTA 10776 29 100.0 32 ............................. TAAACCAATGGCTAAATACCTAGTAACATTTG 10837 29 100.0 32 ............................. GTTACGCGCGGATTGGACGCTGCCCCTATGGT 10898 29 100.0 32 ............................. ATGGGGCAATGCCAACAACGCTGGACAAGCAA 10959 29 100.0 32 ............................. AGCTTGAGTTTGTCCGGGCGCATACCGAGGCT 11020 29 100.0 32 ............................. CTGTTGACACAAATGAACCTTACCCGCATCAG 11081 29 100.0 32 ............................. CGCAATCTCATTCTGAATACCGCGCTGACGGA 11142 29 100.0 32 ............................. ACACATACTCTGGTAAATTTACCATTGCCCTG 11203 29 100.0 32 ............................. TACATTTCCAGTGACCACGGGGAAAAGATCGG 11264 29 100.0 32 ............................. CCTTGCCGCCGGTCTTGGCAATGGGAGCGCCC 11325 29 100.0 32 ............................. GTCTGGATTCAGGTTCTCACCGGATCGGCCCC 11386 29 100.0 32 ............................. CCGCCATCGGAAAGGCGTTGTAAAGAAAGGCC 11447 29 100.0 32 ............................. TTAGTAGAGGTGGCAACAATATTGGTGCCCAT 11508 29 100.0 32 ............................. CAGCTGACCACAAGCGAAGCGGCCCAACAGAA 11569 29 100.0 32 ............................. CGGGGGGCGAACTGAGCGATGCGGACCAGCAA 11630 29 100.0 32 ............................. GGTGCGACCTGAACCAGTTTCGGGATCGGCCA 11691 29 86.2 0 ...................T.T....A.A | CTC,C [11710,11718] ========== ====== ====== ====== ============================= ================================ ================== 45 29 99.5 32 GCGTTCCCCGCCCACGCGGGGATGAACCG # Left flank : ATGCGTTCCGGCGCACCGGGCTGTTGGCGCAGATCATCCCGCGCATTGAAGAGGTGTTGCGCGCGGGCGACCTGCCCGTGCCCGATCCCCCCACCGAAGCCGCCGGGCCCGCCTTTCCCGACGATCCGGCCCCCGGCGATCAGGGGCATCACGGATGATTGTCGTCGTGGTCTCGAACGCGCCGCCCCGCCTGCGCGGACGCCTTGCCGCCTGGCTGCTTGAGGTGCGCGCGGGGGTCTATGTCGGCGCCTATTCGGCCCGGACCCGCACGATGATCTGGGATCAGGTCGAAGCCTATATCGACAGGGGCGATGCGGTGATGATCTGGAAAGCGCCCACCGATCAGGGGTATGACTTTAAAACCGTGGGCACAAACCGCCGGATGCCGGTGGATTTCGACGGCATGAAACTGGTCAGCTTTGCACCCCGAAAACCGTAAATTTCTCGGTACGTTCTTTGACATTAGAATATCTTTGGTAGAACAATCGCTTACAACAAGA # Right flank : TTTTATTGAGCCGCAATGACCCTCTCGCTGGACGGAGTCAGGCTGCGAGTTGCTGTTCGAGCCAGGTCATGGTCTCTGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCCCACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCGCACACGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //