Array 1 245094-244157 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VTIV01000002.1 Listeria monocytogenes strain FSL L7-0546 NODE_2_length_559576_cov_31.306258, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	=============================	=====================================	==================
    245093	    29	  93.1	    35	..........T.......G..........	GACATTAATTTTATTGCTTTATCACTGAACTCAGC  	
    245029	    29	  93.1	    37	..........T.......G..........	GTAGTTTGTGACCGTTTAAAAACATAATTTGAAAAAC	
    244963	    29	  96.6	    36	..................G..........	TTACCCGTTTCATCATTTCCAAGCGTTGCATCAATG 	
    244898	    29	  93.1	    37	..............A...G..........	TCTGTATAATAAGAAGTACGTTTTGCGACTGGTGCCA	
    244832	    29	 100.0	    36	.............................	AAAACAACTAAAAGACCGCCTACTATTTATACTCCT 	
    244767	    29	 100.0	    36	.............................	TTTAACGTTGGCCCAACATTTTTATCTGAGAAGGGG 	
    244702	    29	 100.0	    35	.............................	TCTTTTAACCTAGCTCTTATCAATGTTTGAGTAAC  	
    244638	    29	  86.2	    36	A.............AC..G..........	GATTTAAAGTTAGATATAAATAATGTGATTTTAGTT 	
    244573	    29	  93.1	    35	..........A.......G..........	ATTTACGCAAGAACTGGAACTATTAAAGCCGCTAT  	
    244509	    29	  93.1	    36	.........G........G..........	AAAGGTAATACGAATTTATCTGTTAGTTGAAAAATC 	
    244444	    29	  93.1	    36	..............A...G..........	TCGACATAACACATATATTTAAAATCATTAAAACTA 	
    244379	    29	  93.1	    36	..........A.......G..........	AATTGTTTGGCTAAAGCGTCAGAATAAGATGTTGTG 	
    244314	    29	  96.6	    36	..................G..........	AAGGCAGTTAAGTAAGCAGCGACAGGGAACGGAAAT 	
    244249	    29	  93.1	    35	..............A...G..........	GGAATCACGGACAGTCAGGCGAAGATAACTAAACT  	
    244185	    29	  86.2	     0	......A........CA......A.....	|                                    	
==========	======	======	======	=============================	=====================================	==================
        15	    29	  94.0	    36	GTTTTAGTTACTTATTGTAAAATGTAAAT	                                     	       

# Left flank :   GGCGTCCGTGCCACTACTTCAGCTGACATTTTACTTGAAAAAGGTGCCGTAGAAGTTATCGCTTGCGCAACCCACTCCGTCATGGCTGGAAACGCAACCGAACGCTTACAAAACTCCAATATCAAAGAAGTCATCACATCCGACTCCATCGATCTTCCAGAAGACAAGCAATTCGACAAACTAACAACTATCTCCATCGGACGAATCTTAGGCCGCGCAATCGAAGGCGTACAAGAAAACCGCTCGTTGCATCCGTTGTTTTAAAGAATAAGTAAAAAACAGTAACTTAGTAGAGTTGCTGTTTTTTGTTATCTGTCGACCTTGAGTAGTGTGAAAAATACCGGAGACCGACAGAAAGTTGTAAGTGGCTGGGGGAAGGGAGGTTTGGCGGTATTTGCTTGGGAAAATCTTCCGGATAAGAGGAGATTTTAGATGTTTTTTGGTAGGTCGACAGAAATAGCTCTTTGAGGTAAGATGGGAGTAAGAAGAAAAGTTAGCGG
# Right flank :  TCCTCCATACACAACTCCACCACCATCCATCAAAACCAAAAAAAACGTGACTGCCAAACTCGCAGTCACGCTTTTTCTCAATCATTAAACTCTTTCAAAACATCCTCTTTAATTTCAGTATAATTGGTTACTTCCTCTTTCTCCTCGGAAATGAAATTATATGCTTCCACTTCTCCCAAATTCTCGAAATCGGTAAGAGTAGCGTCTGTTTCTTTCAAGTCTTCATTAAATTTGCCGTAGCCCATGCTGATAATCGAACTTAGTTTTTCGCTGTCATGTCCGCCGCGTAAAAATAATGTGTATTCTTGCTCTTGCTCAAGCGCGATATAGTTTTCAATGGATTCATACGCACCTTCATTTAAATACCAAGGTTCTGAAACGTCAATTTTGTCGCCTTTTTTGAAAGTGCCTTTGTAAGTTTCTAAAACTTCGACTTCACTTATAGTGCTGCTATATTCCATTTTTTCTTTATCGTAATCGCCAATTTTCTTATTTTTCAC

# Questionable array : NO	 Score: 5.27
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTTACTTATTGTAAAATGTAAAT
# Alternate repeat :   GTTTTAGTTACTTAATGTGAAATGTAAAT

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:82.76%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTTACTTATTGTGAAATGTAAAT with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-0.40,-1.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [11-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
//