Array 1 57149-57576 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHD01000036.1 Eisenbergiella tayi strain NML120146 BEI63_contig000036, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 57149 32 100.0 35 ................................ CTTACAGTCCGTTGGTTTGGTATAGTTCACTTATT 57216 32 100.0 33 ................................ CTTTGACACTGGACGGATACCGCAGAAAATTCA 57281 32 100.0 34 ................................ CTTCCTTTTGGTTTACCACACACTTTGCAATTAT 57347 32 100.0 34 ................................ TAATACAAGCACCCTCCGGAGCACCGTCTGCATC 57413 32 100.0 35 ................................ TGCCTCTTCTTCTACTATTTCAAGTTGTCTAAATT 57480 32 93.8 33 .............C.................A TTCTTTAAAGGCGATAATTTCACCATAGGATTT 57545 32 93.8 0 .............C.....T............ | ========== ====== ====== ====== ================================ =================================== ================== 7 32 98.2 34 GTCGAAGCCCTTGTGGCTTCGTGGATTGAAAT # Left flank : AATTTCATTCATAAGTAAGACAATGATTTGAAGAAAGAATATTGCGAAAGATTTGAATCAATATGAAATTTATCTTAGATATAGATACTGCAGGAGGTATTATAAAAGTCTTAGTTGAAGTATAGGAAACTATGTACAATTTACGAATTAATGAAGAAAGTTGCTTATCACTTTAAATTTTTTATGCTATACTTTAATTTATAGAAAAGATTGTTATTGTATAAGTATAACAAAATGCGAAGTAATATGTTGATTTGATGTTGGTATGAATAGAGTTTTCAAGGGTTAAGGGCACTGATTCAATTGGGAAAAAGGGAGCGATTTATGTTGGTGCGAATAGGAAGCGCACATGAAAGTCCCGGGAGATTCGCACCAGAAAAAGAGTTGTTATAATGGTGAATAGATTGAAAGTGTTTTAAATAAAGATTATATGAGAGAAAAAATAAAATAATTATACAAATTAAGTTTGTGTAATGAGATTACTTTTAGTTATATTTGCT # Right flank : TAAGTTCGCCCCTGGAGAAATCCAGGGATTTTTTTGTATAAGCCCTGCGGTATTGTGAGTAGAAAAACAAAATTCAAAATATTGTAAAAAAGTCATTGTTTTGTGGAAGAATGATTATTAAAGGATAATGAGCTATATTTTAAAAGAATATTTTAAGAATGTAAGAGAGTGAAAGTTCAAAATTAACAAAACTATCAGAAAATCAATAATAAAAGAATTATTGATTTTCTGATATATTGAAACAAATGAATGTATTTATATTTGTTTTATGCTGATGAAACAATTAATTATCATAAGAGTAAGCCAACTGAATGATAGAAAGGATTTGAAATACAGGTTAAATATTATGAAATGGGAGATTGTCTGTGTTTTGTCCTTTTTTGTAGTGGTTGAAACATATGCTAATTCGTAATATCAAAAGGACAGAATTAGTAATCAGGCTGCTTACAAGGGACTAAGTGATGGAGATTGTGAAAGCATATGAGTTATGGAGGTGCAGT # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCCTTGTGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAAGCCCTTGCGGCTTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.90,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 225141-225498 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHD01000036.1 Eisenbergiella tayi strain NML120146 BEI63_contig000036, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 225141 31 100.0 35 ............................... CTCCTTAATAATGCAAATCAATGCCGCCCGGCAGT 225207 31 100.0 34 ............................... CATAATTTACTTATTCCAAGGACTGGCGGATGCC 225272 31 100.0 34 ............................... CTGATGCACCGTAAGTGGCATAAATGGCATCAAT 225337 31 100.0 33 ............................... CATATCCATGATGAAGTAATCCTGGAATGCCCT 225401 31 100.0 35 ............................... ATAACTACAGAAATCCATCCCTGATCGTTGGTGAG 225467 31 96.8 0 .............................T. | A [225476] ========== ====== ====== ====== =============================== =================================== ================== 6 31 99.5 34 GTCGAAGCCTTGCGGCTTCGTGGATTGAAAT # Left flank : GATATGATTGATTTTATTTTGCAGAACAGTTATTTTTAATTTATTTATCTATGGTAATTATACACTTGCGTGTATGAAATAGGAAGATAATTCTTGGGAAGAGTTGAATGGAATGAGGGGGAAGGGGTTACTGGATAGTGTTGAGAATAAAAATTGAAATTTGAGTAATTTACGAAATGGAGAAGAAAGTTTCTTATCATTTTGAAAAATATGTGATATACTTTTATTTATGGTATGAGGCTTTTGGAAGGTAAGTTTTTTGATGATATGAATGTGGGTATTTGAGAAAATAGTTGGTCAATGGTGATATTTGATAATTGAGTTATTTGGTGCGAATAGGAAGTGTACATGAAAATCCCGGGAGATTCGCACCTGAAAAATGGTGGATTTAATGGTGAAAAGATTGAGAATGATTAAAATGTAGTTATTGTGAGTGGGGATATTATAATATGTGTATAGATTGTTTTGTGAAATGAGATTTTTTTTTGGATGTTTTTGCT # Right flank : TATCTTAATATCCATAGAGTTCACATACTGCTCGAAGCCTTTACCGTGTCAAGTATCAAAAAAAATTTTCAACATCTACATAAAAATAGTAATTATAAACAAAAAATGTATTTCATGATATAATGAGTAGGATAAAATAAACAAAAAACACCACACTTTTGGAGGAATATTATGTTCTTAGCCCATATCAGTGAAGATAAGCTTCGTGAACAAAGTATTCTTGATCATCTGGAGGGGACTGCTGAATTGGCAGGTGAATTTGCCTCTGCATTTGGAACTGAAGCTTGGGGATATGGCTGCGGCATGATGCATGATATCGGCAAATATTCCGATAGTTTTCAGAAGCGTATTCATGGGGGAAAGCTGACGGACCATGCCACTGCAGGTGCCAGGGAATTATATCAAAGACATAATTATGTCTGCGCATATTGTATATCAGGGCATCATACCGGACTTTTAGATGGAGGAAGTGCGGCCGACGTGGGAGGCGAAGCCACATT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCTTGCGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAAGCCTTTGCGGCTTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 233335-234624 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHD01000036.1 Eisenbergiella tayi strain NML120146 BEI63_contig000036, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 233335 32 100.0 34 ................................ TCCCGACTCCCTGCGGCCCGGACAAGATTAACAT 233401 32 100.0 33 ................................ CTCATATCTAATTTCAATACCAAGTTCTTCCGC 233466 32 100.0 35 ................................ GCATCTCCTACAAATGTATCAAGGTCACACTTATT 233533 32 100.0 35 ................................ GCATGTACCGCACATCCTACAAGAATCATTATGCC 233600 32 100.0 34 ................................ AAGTCTAATAATGCGAAGCGCTTTAAGGCTTTGC 233666 32 100.0 34 ................................ TTATCTAAGTCTGAGACATAGCAGCCCCAACGGT 233732 32 100.0 33 ................................ AGCTGGCCGATGAGACAGAGGCAGAAATGCAGC 233797 32 100.0 34 ................................ TATATTTGTCCAAAATTCCCCGCGCCTTATCATC 233863 32 100.0 34 ................................ CGCCTTAATCCTCCGGTTCCTGGCAGGGGCAATT 233929 32 100.0 34 ................................ ATCTGCTCTGTTTTAGCAGCCTGCTCGGCATCGT 233995 32 100.0 34 ................................ CATCATTAAAGTGGCGGCCTTCTTGATAGCCCTT 234061 32 100.0 35 ................................ TTTTGACATATCGGAAGCCATGAGAAACCGATTCT 234128 32 100.0 34 ................................ GTCCAACATCGACATGACGGCATCCTGAATAAAA 234194 32 100.0 35 ................................ TCATTTAACTGGTTCCAAGCAATTAATGCCCCAAG 234261 32 100.0 35 ................................ AGGTTATAAGCATATCCCACCCGGTGAGGATAGGT 234328 32 100.0 34 ................................ CCTCTGAAACAAGCTTTCCCACCACCTTTTTATC 234394 32 100.0 33 ................................ ATATCCGGCCATTTCAATCTCTCCTCCAGAAGA 234459 32 100.0 34 ................................ CTTTGACATGTACCTCCCTACCAGAATGTCATTA 234525 32 100.0 33 ................................ CACAAGAGCAATTGTCTTACTATGCTGTTCCCG 234590 31 90.6 0 .............A...........-G..... | TTT,A [234611,234616] ========== ====== ====== ====== ================================ =================================== ================== 20 32 99.5 34 GTCACCACCTTGCGGGTGGTGTGGATTGAAAT # Left flank : ATGAATATCCACCTTTTTTCTGGAAATAGGAGGCTGTCATGCTGGTATTAATAACTTATGATGTGAATACGGAAACTGCCGCGGGTAAGTCCCGGTTAAGAAAAGTTGCAAAGCAATGTGTGAATTATGGAACAAGAGTACAGAATTCTGTATTTGAGTGTGTTCTGGATCCCGGACAGTGTTTAATGCTGAAAGCTGCATTAACGGAATTGATTGATGAAAATGTGGATAGCCTCAGATTTTATTATTTGGGGAATCAGAATAAGGCACGGGTTGAACATGTTGGAGTGAATAAGGGGATTAATGTGAAAGAGCCTCTGATCTTTTAGTGCGAACCTGAAGCGCACATGAAATCCCCGGGGGATTCGCACCGGAATTTTGATGAGATATTGCTTGGGGTTGCTTTTTGATGTGGAAGAATGTAAGATGTAAAGTGAATTGGGTGTGGATTGTTGGTGAAGATGAATAGGAATTAAGAGTGGTTTTTGTGCAAAATTGCT # Right flank : TATATTATTGCGATTAGGGTATTTATGTAAATCTCATAAGTATATTGCCATAACATTTTTTGTAGGCAATACGATGGGGAATTCATAGAGAAGAGTATGATTTGAGATAGGGAACAGGATAAATATATTATGAATACTTAAGCAAATGACGTTACCAGTCTGTCTTGTTTTGTCACGGATAGAAAATATATTAGAAAGATTACCATTATTAATCATAATTTTCATGGATAAGTTATTATGGCAGGATGTAGATATTATAAAAGGTTTTAGGTGGAAGTAGATGGAGATTTACTGAATGAAGGAGGCTTGATATATAAATATGAATTACATTTTGAAGTAATATTTTTAATGATAAAGTAAAATAAATTCTTACGAATAGGATCTCCATGAATGTATAAATGAACTTTGGGTAATTTGCGGATTAGTGAAGAAAGTTACTTATCATTTTAAATTATTTATGCTATACTTTGATTCATAGAATAAAACTTTACATTACTGTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTGCGGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACCACCTTGCGGGTGGTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 235425-235979 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHD01000036.1 Eisenbergiella tayi strain NML120146 BEI63_contig000036, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 235425 32 100.0 33 ................................ ATCATATCATATAGCACCTGCCTTTTCATTTCC 235490 32 100.0 33 ................................ CAGAACAAACATAAAATTGTCTATTGTTAGACT 235555 32 100.0 34 ................................ TTACAGATGGTCATCACAGGAAGGCAGCTGCTGA 235621 32 100.0 34 ................................ TTCCGTGGTTTGTGTGATATGATCCATTTTTACC 235687 32 100.0 32 ................................ CAATACTAGCAATTGTTGTTTTACTGTTATAC 235751 32 100.0 33 ................................ GGTTGTCGGCCGGCCACAGCAGATGCATATATT 235816 32 100.0 33 ................................ AGATGCAGTATTATCTCCCACTACCATAAAAGG 235881 32 96.9 35 ......................T......... CGGGTTGCGGAAGAAAGCATTATGGAAACAGCAGG 235948 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 9 32 99.7 34 GTCGAAGCCTATACGGCTTCGTGGATTGAAAT # Left flank : GAGGCTTGATATATAAATATGAATTACATTTTGAAGTAATATTTTTAATGATAAAGTAAAATAAATTCTTACGAATAGGATCTCCATGAATGTATAAATGAACTTTGGGTAATTTGCGGATTAGTGAAGAAAGTTACTTATCATTTTAAATTATTTATGCTATACTTTGATTCATAGAATAAAACTTTACATTACTGTTTGTTGTTATAGCATAAGGAATAAGAACAATAAATTTTATAGTCATATAATAGTTTATTGTTAGCATGATTAGAGTTTTATTGAGTAAAAGTACTTGTTTAATTATGAAATTTGCGAACAGAGTTATTGTTAGTGCGAATAGGAAGTGCACATGAAATTCCCGAGAGATTCGCACCTGAAAAAGAGTTGTTTTAATGGGGAAGAGATTGAAAATAATTTATATAAAGATATTATGAGGTGGAAAATATAATAAGTATATAATTAAGTTTGTGTTATGAGATTGTTTTTTGGATATTTTTGCT # Right flank : TTGTAAGAAGTCGCACCTTGCATTGATGTAAATTGCATATTATTCATAGTTAAAACTTATCCAATAGTAAGCTGTCGTTTTATGTATCTAAGAAATAAAAGAATACATCCACTAGACAACACATTTTCGCCCTTATGACGTTTGTCAATTATTATCTATAGTAAAACAAAGAACGATTTATAATACCTATACATTCTCTTACAAAATGAGGTGAAAAAATGGGAAAGAATGAAGATTCTTTCTTCCTGAATTACCTGCCAATAAGTATAACTTTGGTATCCTTGGAAAAGGCTGAATTACCCCCTTTTTTGGGTTCTGCCCTTCGCGGTGTAATTGGACAGGCATTATTTCAGGATAAGAATGCCTACAATTATCTATATCACAACGGCAAACTGAATAGTAATATGCAAGATATAATTAATCCGTATGTGCTCATTCCTCCTGATACAAAGAAGCAAATATACTTTGAAAAAGAGGAGCTAAACTTCAAAATACTTCTT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCTATACGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGAAGCCTATACGGCTTCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.50,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 247014-247768 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHD01000036.1 Eisenbergiella tayi strain NML120146 BEI63_contig000036, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 247014 32 100.0 33 ................................ TGCAATATGGTATTCCCACTATTCCTTGCCCTG 247079 32 100.0 33 ................................ TCTAACCATTGGAGAGAATACATATAAGGAGGA 247144 32 100.0 33 ................................ CTGGCATCCATGCCTTTGATTGCCCCGCTGTCG 247209 32 100.0 35 ................................ GGAATGCCAATCCGTACCCTGGAAAATTGGGACCG 247276 32 100.0 34 ................................ CCCTGTATGAACAAACTACATCCATCAGAATCTC 247342 32 100.0 34 ................................ ATTACAACCTCTGTCATGAATATGACGAAAACAG 247408 32 100.0 34 ................................ ACATCGTCGCTTGCAGATAAAAATGCTTCTCTAT 247474 32 100.0 33 ................................ ATGGTAATACCTCGCTTTCTTTAAAAATAATTA 247539 32 96.9 34 .......................A........ TATCTGGGACAAGCCATGGATATTGTATGGGTTT 247605 32 90.6 34 ...A.......C.C.................. GGTACAGCGAAGAGGGATTTCTGGCACAGGCCCA 247671 32 90.6 34 ...........C........A..........C TGAGAATTGTTGTTTTCCCACATCCAGACTCTCC 247737 32 81.2 0 ...........C......CTT.AA........ | ========== ====== ====== ====== ================================ =================================== ================== 12 32 96.6 34 GTCGAGGCTTATGTAGCCTCGTGGATTGAAAT # Left flank : ATCATGCGGATTTATGATATTATGAATGAAGTGATGAAGTGTTCCTTTGAAAAAGTGGTACAGGCGAGAGGAAACCGGGCCGGTTTGTATTATCATGGACGGATTGTGGACGCTTTTGAGAGGAAGGATGATGAAGCGGCTGAAAAAATAATGGATGAGCATATGAAAGAGTTGTATGAGAGCTTTTTTAATGATTTTAGGGATTGAGAATGCTGTATGGACTTATTTTATTAAGTAAACGTTATATTGAGTAAAAAAGAATTAGTGATATTTGTTTTTAGATGATAAAATAAGAGTTGAGTTTATAATTTTAAGAGGGTCATAAGTAAGGTGCGAATGTATAGTGCACATGAAAATACCGGGGGATTCGCACCAAAAAAGTGCTTAAATATTATGGACATAAATGTTTTGAAGGCTTATTATATAAATGTGTGAAGATGTATTTGTGTAAGAGTTATATTTCGGGGTTAAATGGTTATGTTTTTTTGAATGTTTTTGCT # Right flank : TTGCATGACTGGTACAGGCATTATTTATTGTATGTCGAAGCTTATGTAACATCGTGTTGAGTTTGGAGGAATAACGATGCTTATGTTGTCACAATTCTATGAAAAAATTGTAACATCCGAGAAAGCTTCCAATAGAAGATACTGTGGAGGCAATAACAATTGTGTCGAAGCATTTTAAGGTAATTTATAGTATGAAAAAATAATTATTTTGATTTAAACTAAAAAGTGTGCATAAATTATTTGTGTAAATATCTGAGTTATTTAAAGTATTATATGAGCCATGTTATAAAATATGGGAAGATCAAACAATTGTAGGAAGAGTATAGAAAAGGGATGAGTTATGGAACCTTCAAAAAAAGATTGGTTACTATATAGGGAAAAGATAGCAGGTTGGCAGGAAGCTTATATGGAAAAGCTAATAAAAGAATATGTCGATTATCTGAATGGTGACGAACCTGCATCTACAAAATTCTGGAGAATGGAAAAGCGTATCAAACAGG # Questionable array : NO Score: 9.09 # Score Detail : 1:0, 2:3, 3:3, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTATGTAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.00,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 6 250540-251428 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHD01000036.1 Eisenbergiella tayi strain NML120146 BEI63_contig000036, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 250540 32 100.0 34 ................................ TACCAGACGCTTTTTCTCTTCTGCTACAGCCTTC 250606 32 100.0 33 ................................ TTCAAAGAAAGCCGGAAAGGCCATTGTAAAGGC 250671 32 100.0 34 ................................ CCTGTCAAGTGTTGGCTTCAACCGTAACCCACGG 250737 32 100.0 34 ................................ AACAGGGGAGGCGGTATTTTACTGGCCTGACAAA 250803 32 100.0 35 ................................ CCAATATCTCATTAGAATCATTTCGAACAATAATG 250870 32 100.0 33 ................................ AGATTATCAATAAAATCAACTTTATCCAGATTA 250935 32 100.0 35 ................................ GAAATAGAAAGATGATTAAAATAGTATGCTTGGAT 251002 32 100.0 34 ................................ CCCCGAATGACAGAAGCACCAGGTATCGTTTCAT 251068 32 100.0 34 ................................ AAATGAACAAAATACTATCATACAAGGCGCATCA 251134 32 100.0 35 ................................ ACAGGAACGAATGTTGGGTGGGTGAAACATATGCC 251201 32 100.0 33 ................................ TTCCAAAAGCCTTCCAATACTAGCAATTGTTGT 251266 32 100.0 34 ................................ TCAGCAGTTACCACAGAAAAGGCAAATCCGTATC 251332 32 100.0 33 ................................ CTATTCGCAATATTTATAGCATGAGGCTTATCG 251397 32 93.8 0 .............T..............G... | ========== ====== ====== ====== ================================ =================================== ================== 14 32 99.6 34 GTCGAGGCTTACGCAGCCTCGTGGATTGAAAT # Left flank : TTAATTAGCGTTATATCTGATAGATATAAACGAATATTTGATTACTTATTACCTTTAAAAACAGAACTAAAAATAAATGTAATTATTTGTTTGATAAATATGGAGATTAATTTTATATGTTTAGGACAAACATACACGATATAGATATTTTTTAGTATACTGGGGATCATTTTCTTGATTTATCTATGTGGCTATTCAGTAATACCAAGTAAAAAGTATTATTTGTATCATTTATTATGTAATATGTGAGTAGAAAATAAAAATCAGTGTTATTTGTTTTATATAGTAAAAGCAAAAACAGTTTACAGTTTTAAGAGAGAGATAAACAAGGTGCGAATGTATAGTGCACATGAAATTACCGGGGGATTCGCACCAAAAAAGTGCTTAAATATTATGGACATAAATGTTTTAAGGGTTTATCATATAAAGGTATGTAGAAATATTTGTGTAAAAGTTATATTTGTAGTCTAAATCTTTATGTTTTTTTGAATGTTTTTGCT # Right flank : TATGGATATCAAATGATATATCGAACTTATATACAATATAATATTAGATGGAAAGACAGATGAAAATATGGATTGAAATATAGAATATATGTTAAGAAAAGAAATGACCATAGCCAAATATATAAGAAGTATATTTCACAATCTGTAGGAAAGAGTACATCAAAAGGCCATGTTGAGCCAGTTCATAAAGCTCTTGCTAAGCGCAGAAGAAGATGTACTATTCCAGATAAAGATGAAAGAGGTTGAAATTTTGGGAGGAAAAGAAGCATCAAGAGGTTTTTTATATCAGGCATTTGCTTCCGTTCTTGAAGCGTTGTGTCAGAAAAATTGGGATAAAATTTATATAGAATTAAAGTCAAATGATGATAAAGTTGATATTGCATTAGAAGAAAATGGCAGAATTATTAAAAGTATTCAAGTGAAATCAACAATTAATACTTTTAGCAAAAGTTCAATACAAACATGGCTAAGTGATCTTATTCGTGACGATGTAGGCTCGG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTACGCAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.20,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //