Array 1 4522884-4523271 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP008868.1 Pseudomonas aeruginosa strain T63266 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4522884 28 100.0 32 ............................ GCTGGCCGAGACCGACAAGTCGAAGCGCACGG 4522944 28 100.0 32 ............................ TGTTCGTAGCCGATATCGCTGCACGCGATGCA 4523004 28 100.0 32 ............................ GAGGGGCCGTATCGACGGTGATTGATGCGACA 4523064 28 100.0 32 ............................ AGCAAGGCATCCGGAAACGGGCCTTGGGTCAC 4523124 28 100.0 32 ............................ AAGGAGCACCACGACATGGTCAGAGCAAACCC 4523184 28 100.0 32 ............................ TCCTAGTTCTTCGCCAAGCCGGAAACCGAGGC 4523244 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGATCGCTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGGGTTTTGGTCTA # Right flank : AGTAGGAACGCCATCCACTCGAGGTCATGGCGCGTTCACTGTGTAGTGGTCTACTGATCCCGGACACCGATTTAGGCGAGAATCCTCGCCGTGAGAGAGGTGTCTGATGAGCAAGCAACGACGTACGTTTTCCGCCGAGTTCAAACGAGAGGCTGCCGCCCTGGTGCTGGACCAAGGCTACAGCCATATCGACGCCTGCCGTTCGCTGGGGGTGGTGGACTCGGCCTTGCGCCGTTGGGTGAAGCAGCTCGAGGCGGAGCGCCAGGGTATGACCCCGAAGAGCAAGGCGTTGACGCCTGAGCAGCAAAAGATCCAGGAGCTGGAAGCCCGGATCAACCGGCTGGAGCGGGAGAAAGCGATATTAAAAAAGGCTACCGCTCTCTTGATGTCGGACGAACTCGATCGTACGCGCTGATAGACCAGTTGAGTGAGCAGGAGTCGGTGGAAGTGGTCTGTTCAGCTTTCGATGTGGCGCGGTCTTGCTACTACGTCCACCGTCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 4527158-4525810 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP008868.1 Pseudomonas aeruginosa strain T63266 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4527157 28 100.0 32 ............................ ATCAGTCGATCCGATCCAGCGTGCCGTTGAGC 4527097 28 100.0 32 ............................ TGCCACCCTGTCCGCCGTCGCAGTATCCGTAC 4527037 28 100.0 32 ............................ ATGTCCCAGAGCTTGCCAAGCTGCTGGGCCGC 4526977 28 100.0 32 ............................ TCGTCGTTGATGCTTTTCAATATCTTTGATGC 4526917 28 100.0 32 ............................ GATCGACCTGGTGCATACGCTCCGCCTCGATG 4526857 28 100.0 32 ............................ TGATATCCAGCTGCTCCAGGAACCGCTGGCGG 4526797 28 100.0 32 ............................ TCTGCGGACGCCAGGCGCCCGGCCAACACGCC 4526737 28 100.0 32 ............................ ACATGCCGATCCTGCTTAAGCGACGGGATAAT 4526677 28 100.0 32 ............................ AGCACCAGGACCGAACCAGGCGGCGCAAAGTC 4526617 28 100.0 32 ............................ CGTCCTGGACTACGAGCACCAGACCCTAAAGA 4526557 28 100.0 32 ............................ TCGACAAATATCCTGCAAAGCGAATCAGCCGT 4526497 28 100.0 32 ............................ ACAACAGCCGTTCGTCGGAGTTGACCATGCGT 4526437 28 100.0 32 ............................ TCGGATTGGAGCGAGTTGGAGAAGCTACAGAC 4526377 28 100.0 32 ............................ TCTCCGCCCCAGCTATTGCCGGGGAGGGCATG 4526317 28 100.0 32 ............................ ATAAAGCACTTCCACGCCGCGCTTGATGCTCT 4526257 28 100.0 32 ............................ ACCGCCGGCCAGCACACCCCTTGGTCGTTCGC 4526197 28 100.0 32 ............................ TCTTTGCAATCTACAACAACCCTGATCGACGA 4526137 28 100.0 32 ............................ AATATGAACATTAGGTACATATCAGGCGGGAA 4526077 28 100.0 32 ............................ TTCACGTTGGGCGTAGGACAGCGCGTCCTGCC 4526017 28 100.0 32 ............................ AACAGCATGGCGTCCACCCGTACCGCCCTCAT 4525957 28 100.0 32 ............................ TACCGTGGCGACGTTGCAACCCGCTGGTCCGA 4525897 28 100.0 32 ............................ TTGAGCACAACCGGCTGAGCCAGCTGGTTGTC 4525837 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 23 28 100.0 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCTTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGTGGCATCGCCCATCACAGGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGTAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGAAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : CTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCACTACCAAACATCCGAATATAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGGGACAGGCCACGGTCAGCATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACCGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATTGGTAGGCTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //