Array 1 36096-36713 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIZZQ010000026.1 Clostridium tagluense strain CM023 contig00026, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 36096 30 100.0 34 .............................. AAGCCAAGCGCACGCATTGGTGCTCCATATTTCG 36160 30 100.0 36 .............................. AGTATAAAGAATCTATTGTAAAAACTACAAGTAAAA 36226 30 100.0 35 .............................. TTGATAAGTACTGACTCCTTGAAAAATGGCATTTG 36291 30 100.0 36 .............................. AGTGTATGTAATCCTCTAATCTTACCTTTACCTCTA 36357 30 100.0 35 .............................. ATTAAAGCATTGAATTTATTAAGTTTAGCTTCAAT 36422 30 100.0 35 .............................. TTTCTTGTTTAAGTTCTTTAGATAATTCTTCTACT 36487 30 100.0 35 .............................. GTATCTTCAACTTTAAAATCTTTAACTTTACCTTC 36552 30 96.7 35 .......T...................... CAAAGCCTTTTAGGTCATGCCCAAAGTTCTACAAC 36617 30 100.0 36 .............................. AAGCACTCTAAAATAAGATTGTAACTATAACCTTCC 36683 30 83.3 0 ................T.C.C..AA..... | G [36710] ========== ====== ====== ====== ============================== ==================================== ================== 10 30 98.0 35 GTTGAACCTTAACATGGGATGTATTTAAAC # Left flank : GACGCTTGTGCAGTGGATAAAATATTAAATAAATTCAAACCCTGTATTATAAAAAATAGTATTATAAACGGTAAATTTGATGAGGATTGTTTTCAGGAGTTAAATTTGAATTTAATAAAATGTATTTATAAATTCACATCTAACTCCATTGATGTAAATTTGAAAAGTTATTTGATTTCTTAAGCCTCAAATATTTGGCGCTGCCCATGAAGTGATTATTTTTGAAGTTTTCATTGAAGGAATATAGAGTTGGAAAAACAGATGTTTTTTTGTGAATATAGAAAATATAAAGTCTTACAATATTATAATTTTGAGAAACTAAGAATTCCCCAACCGTTTAAAAACAAATACTAACATTAAATCCAATAGGAACAATACTTTAAGTTAGTAATTATATAGAATTTCTGATTTTTTTAAACGGCTGGTAAAATCTCCTTGAAATATTGATATTTCAACCGCTTAGTGGTATTATAATTTTAGAGAATGGCTTAATTGCATTG # Right flank : CTATTAAAACAGCAAGAGTTAGTAGAGTAAACAAATTACTTTATTAGCTCTTATTCTATTCAAATGAAAATATTGGAATATATAAAGACATAAATGGATTATATGGTACAATATATATAATAGGTTTTGTAAAGATGTACATGTATGAATTTTGTAGAAGTAATATTCACCTGACAGTAGTAACAAAATAAATTTATTATTGTTTTGAAAATATAAAGGAATAAAGTTACTAAGGTATAAGGGTATGTTAGTTCAGAATAGTGAGGACTCACAAGAACTAGTTTTTCAGCTATAGCTGATGTTATAGGGTTGGTAGTGTAAGATAAGATGTTTTATGAAAGGTGATATAGATGATTAATTGGGATGGCATAAACAAATTCTCATGTGTTGTGACGATAGGAACACCAATAGTTACATTTTTTTTAGGAATGAAATTTAGTAAATTCAAAAGGTGGATTGATTTTAAAAAAATAAGAAAAAATGTATCTCAAAATTCAGGA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGGGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 48229-49045 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIZZQ010000026.1 Clostridium tagluense strain CM023 contig00026, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 48229 30 100.0 36 .............................. TTCTTTTCACCCCTTTATAATAATAGTTTCTGCTTT 48295 30 100.0 36 .............................. AGGTTTCACGACATTATTTAAATATTAACAATGGGC 48361 30 100.0 34 .............................. TCCTTAACATTACCACCAGTGTACTTGTAAACAC 48425 30 100.0 36 .............................. AAATGATGGTTTGGCTTATAACTCAGAATGGCATGG 48491 30 100.0 35 .............................. TTATATCTTCTATTTCACCCGTTTCTTCAGGACTA 48556 30 100.0 35 .............................. ATGCCTTTACCATATACAATCTCAAATTCTGCTTG 48621 30 100.0 35 .............................. ATAAATAACTCTGTCTTATTTTTACCATCATACTT 48686 30 100.0 36 .............................. TTGATTTGTTTATGAAGATATTGTTTTGAGAACCCC 48752 30 100.0 37 .............................. TTGCATTGCGAATTAACTTTATAATAAAATATTATTT 48819 30 100.0 35 .............................. ATGTTTTTTTCTTTAAGTGTCTCTGATATTGAAAG 48884 30 100.0 36 .............................. TCCATTAGCTTTATTGTTGGAAAATCAAAACTTACT 48950 30 100.0 36 .............................. TAAGCAAAGAATGTTTTTCTCGTTCCTGTAAATAAA 49016 30 73.3 0 .......A.......A.C...GTG....TT | ========== ====== ====== ====== ============================== ===================================== ================== 13 30 97.9 36 GTTGAACCTTAACATGAGATGTATTTAAAC # Left flank : TAACAAAATGGATATTGAAGTTATTAAAAATAGCATTAATAGCAATCTTTTAAAAAAACTAAAAATGATCAATGGGATTGATTGTGTATTAGAGCATGACATGATTAAAACAATAGAAGTTAAAAACAATAAGCCTATTGCATTCAAATATAAAAACAACAAATTACTTGGAAATAAATTTGAAATTAAAATTAAGGAAGATGAATTATCTCAAATAATGGCATATGTTGCTATGGCTACAGGCTTACTTGAAAAAAACTCGTTAGGATATGGATATTGTCTCTGCAAAAACAGATAATTTCTTAAACTTAAGAAACTAAAAATTTACCAACCGTTTCAAAATAAAAAACAGCCTTAAAGCCAATAGAATCAAAGCTTTAAGGTTATTATTTATATATAGTTTCTGATTTTTCAAAACGGCTGGTGAAATTTCCGCGAAATCTTGATATTTGAACTGTTTAGTGGTATTATTAATTTTAGCGAATGGCTCAATTGAATTG # Right flank : TTATAATGAATATTGCCCCCTCACTTAAATATAATATCCATTATGTGTAAATAAAATATAATTACAATGAAAATTCATATGAAATAGAATGTAATATTAAGATTTTATATAAAAAAATTTGATTATATAGCGAGGTGTTAAAATTATGAGAAATGAGATGGAATTGTTTCATGGTAGCGGAGTTATAGTGAAAAGACCAGATGTATTAATAAGTGGTTTTTATAAAGATTTCGGATATGGGTTTTATTGTACTAATATTGAAAAGCAAGCAAAACGATGGGCGTTAACTAAAAAACCAAAGCATGTTATTAATAAATATATTTATAATGAGAATAAAGAATTGAAGATTTTAAAATTTGATAATATGACAGATGAATGGTTAGACTTTGTTGTTTCATGCAGGAGAGGAATTAGTTATACCTATGATATAGTAGAAGGACCAATGGCAGATGATACAATTTGGGATTATATAGAAGACTATATAGATGGAATAATAACTA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //