Array 1 34297-34716 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQOK01000005.1 Clostridium botulinum strain KAPB-3 contig5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 34297 30 100.0 35 .............................. GTTAGAAGGTCAATATAAAGATACATGGAAAGGAA 34362 30 100.0 34 .............................. ATGTACTTCTTTGTTGTCTTTTCACTTTTTAAAG 34426 30 100.0 36 .............................. CTAAATTGTTTATATTTGTTATCATCATAAATGCCT 34492 30 93.3 37 ..............G..A............ CTATTCTTTTCATCTAATATACCTGCATTCTCTAAAA 34559 30 86.7 34 G...........T.G..T............ GTTACCTGGAAACAGCAAAATAGAGCTTAGATAA 34623 30 90.0 34 ..AG....G..................... ATAAGATATGACTGGAATAAAGTTGTTAAAATCT 34687 30 93.3 0 ..............G..............C | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 94.8 35 ATTTAATAATAACAATTGATGTATTTAAAT # Left flank : TTCAAAGATAGTTTTAAAGGAAATAATTATGCTAAAAAGAAAATTGATATTAAAAATTCTATGTGTGATTTAAGTTATTTTTGTTATAAATATAGTTTTAAAGGAAGTATAGAGCAATTTGAAGATATGTTAAATAATAAAGATATTTACTATGAATGTATTGCAGGAATATATTGCTTAATGTTAACGGAAGATGCGATTTCTACAATTATAAATCCAGAATATAAATTCAATAAGGAGATATTTGATAGATTTCAAGGAAATTTAATAATTTAGAACTACTAATATTCGTATTTATATAACTTAAAACTCAAAATTTAATACTATTTTACCAAGTGATTTTAAAGAAATTTTATGTAATGCGTTGATAAGGCTATCTTTGTTAAATGATATTTAAATAATAAGTATTACTTAAGTTTACCTGGTAAAATATTTAATAAAGCTGGAAATTGGGGTAGTTATGTGAAAATACGAATATTAAGAATGGCTGTTTTACAATG # Right flank : CTACAAAGTGCATTGAAAATTACAAAAGATAATACAGATAGTATAACTAAAAATATAACATTAAATGATACTAAAAAAGTAACAAAACATGTAACAAGTTTTGTTACTTTTTTTGTTACCTATTTTTATTTAAATATTTTTAACATGGTCTTTATGGTTGTTTATAACTACATTTGTTAAGCCATTAATAGATAGTGTTAAAGCATCTATTTTAGATTCAAATCTTATTAATAGATACGAAGCCACTGCTATTGGAAAGCCGACATTAGTTATTAACATTATCATATCTTCCATTCTTTATATTTAGTAGCAGGTAGTCTAATAAGTATCAAATGCTACTAAAGGTCACCTCCTTATATTTAGTTATAAATATGTATGCACTAGGAGGTTTTATTTAACAGAAATTAAGATATTTTAGTTCTTTGCCAATATTACTTGAATATAAAAAGGCACTGGTAAACTCAATTAGTACTAATGTAGATCCACTAGTGAATTATTTA # Questionable array : NO Score: 2.85 # Score Detail : 1:0, 2:0, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAATAATAACAATTGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 424674-424836 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQOK01000102.1 Clostridium botulinum strain KAPB-3 contig102, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 424674 31 100.0 34 ............................... CTAATAAATCACAAGCCCCACTTCCAATATTTCC 424739 31 100.0 36 ............................... ATTTAGTTTTAGATATTAAGAAATCATAATCATTAT 424806 31 93.5 0 ........................G.T.... | ========== ====== ====== ====== =============================== ==================================== ================== 3 31 97.8 36 GATTAACCTTAACATGAGATGTATTTAAATT # Left flank : CGGTAGAGCACATGACTTTTAATCATGGTGTCCCGGGTTCGATTCCCGGGTGAGCCACCAAAATATTGTCCAAAGTAGAAATGTAAATTTTTACTTTGGATTTTTGTATTTTAGAAGAATAAAATCGAATACAATATTGATTAGATATTTTAGATAATAAAACAATAGCAATAAAAATTGGATTAACAGAAGAAGAAATAGATGCCCTTAGAAAAAAAGAAAGTAATTAGTGTTTTTAGAAATACTTAGGATTTAATTATCTTAAGTGTTTTTTCTGCGCAATGCTATTAAAGTGTATAACTTAACTAGAATACTAAACATTATATTTTACCAGCAATAAATTTATATGAAACGCCTTAATCAATTGAAATTACAGGTCTAAAGTGACCTTTAAAAATTTTTATTAAAATTTGACAAACGGCTGGTAAAGTTTCCTTAAAACCTTGAAGCTTCAATGCTTTAATGGTACTATTGATTTAAGAAAATGGCTATTTTACTGT # Right flank : TCCTATAATTTTTAAAGTTATTTATAAATTCAGAATAATAATATATAATATATATAAGGAAATAATACAAATGATAGTGATAAATAAGAAGGGCGTGAAATAGCTTGATTAAAAAGCATGATTTTGATGCGGCATGGAAATCAATATTAGAAGCCTTTGAAATAGAAATAGTAGAGCTACTTTTTCCAGAGATATTTTCTAATATTGCATGGGAACTTGGAACTGAAAGTCTAGATCAAGAACTACAAGAAATTCAAAAGGATATTTTTGATAAAGATAGTGCAGAAAAGATAATATCAGATAAGATAATAAAGGTTAGATTAAAAGATAAAGGAAGTAAAATATTATTTATTCACGTAGAAGTGCAGAGTTATAGTAGCGATGAAGCTGTATTTGGCGAAAGAATGTTTAGATATTTTTATAGAATTTGGGATAAATTCAGATATAAATACAAAGATAAGTCAGAAATAGTTGCAGCAGCGATATACACTTATAAAGGT # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACCTTAACATGAGATGTATTTAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 426153-426509 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQOK01000102.1 Clostridium botulinum strain KAPB-3 contig102, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 426153 30 100.0 36 .............................. AAGGCATTTAGATGATTTAGAAAGAGCAAAATTAGC 426219 30 100.0 36 .............................. TTGTTACTTTCGATTTTGATATTAAACCTCTTTGAC 426285 30 100.0 34 .............................. TAAGGAGATGATTTTTTTTGAATGAACGAATAAA 426349 30 100.0 34 .............................. GGTTCAGCTATGGGTGTAAGTGTATATAGTAGAG 426413 30 100.0 37 .............................. CAATAATAACTTAACATTTTGCAATATTCACCTGTAA 426480 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 100.0 36 GTTTAACCTTAACATGAGATGTATTTAAAT # Left flank : GAAATATGATGATTATAAAAAGAAAAAAGGAGGGGCATTGAAAATGACTGTTGATGAAATAAGAAGAAGACATTATACACAAAAAGGTAAAGAAGAAGGAGAAAAAATTAAGGCGCTAGAAATAGCAAAAAATTTATTAGATATTTTAGATAATAAAACTATAGCAATAAAAACTGGATTAACAGAAGAAGAAATAGATGCTCTTAGAAAAAAAGAAAGTAATTAGTGTTTTTTAGGAACACTTAGGATTTAATTATCTTAGGTGTTTTTTTCTGTGGAATTCTATTAAAGTCTACAATTTAACTAGAGTAGTAAATATTCTATTTTACCAGCCATAAATTTATATAAACTCCCTTAATCCATTGAAATTACAGGGCTAAAGTGACCTTATAAAAATTTTATTAAAATTTGACAAACGGCTGGTAAAGTTTCCTTGAAACCTTGAAGTTTCAATGCCTTAGTGGTATTATTGATTTTAGAGAATGAGGATTTTACTATGG # Right flank : TCCTACATCTAAGCTTAGATCTCCTTGCCACTCCATGTTAATCCTTCAATTTCTCCTATTCTTAAACCACAAGTGCCAGCAACTAGGGAAACTAAATAAATATCATCATCAATGTTTTTTAATTTATCCAGTAATTTAAAGAGTTCATCTTTTGTAAGGGCTAATTTTTCTTTTATTTTTTTCTTTGGAATACTTAATTTTTCTACTGGAACAATGTAATTAGAATCATAATTATCTTTATAATAATTTAACATAAGCTTTATTTGAGTTAGATAAGTAATTATAGTGGAAGATGCTTTAGCTTCACTCACCAAACAATCGATTCCAGCTTGGATATGCATTTTTTTTATATCTTTCACTCTCATATCTGATAAGTTAATAAACTTTGCAGTAGCATTTTTATATTTTTCTATTGTATTAGGTTCCTTATAAAGTTTATTATGCGTTATAAATGCATCAGAAAGGTGTTTGAAAGTTATAGTTTTATAATCAGTATTTAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //