Array 1 1629019-1627004 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066066.1 Pediococcus acidilactici strain FDAARGOS_1008 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1629018 36 100.0 30 .................................... TCCGAGCGTAATGACGTTCCCTAGAACTGA 1628952 36 100.0 29 .................................... CATTGCGGTAGTTGTCCGACCAATGTCGA 1628887 36 100.0 30 .................................... TAACTTTACGCTGGGCTCCAGGAATCATTC 1628821 36 100.0 30 .................................... CACTTGAAAAGTAAGAACTCTCTCTCATTT 1628755 36 100.0 30 .................................... GAAGATAAGCAGTATTTTGATGAAACTATA 1628689 36 100.0 30 .................................... TTGACGATTTGCCCGGGTTTCACCGTGCTT 1628623 36 100.0 30 .................................... ACAACACTGCCGATGGATTAAACCGTAGTA 1628557 36 100.0 30 .................................... TATAAAATTTGGCGGTTCGTGACTTCCCGC 1628491 36 100.0 30 .................................... ATACTCTTTTAAACAATACCAAACACCATC 1628425 36 100.0 30 .................................... TGCCAGTTATTGATGAATTCGTTGGCTTTC 1628359 36 100.0 30 .................................... GGAACCAGCTTCGTAACACCCGGGCGAATG 1628293 36 100.0 30 .................................... ATTCGTATCCTAGATGGTTTGGACGCTTCA 1628227 36 100.0 30 .................................... CCGGTAAACTGCTAAGGTCGCTTAAACATA 1628161 36 100.0 30 .................................... ATTAAGGTAGCCCTGCTGAAAATAGACAAG 1628095 36 100.0 30 .................................... TAGATTCTATTCAGCCATTAATCGACGCTT 1628029 36 100.0 30 .................................... CTTTCCCTAATAAATAATCTACAGAAACGT 1627963 36 100.0 30 .................................... GTGATTGCCAGCGACTTCCCAACAACGCCA 1627897 36 100.0 30 .................................... TGTAAAATCTAAAACTGTTAATCTCGTGTA 1627831 36 100.0 30 .................................... AATGGGACAAGTCAAACCATGGTGCTTATC 1627765 36 100.0 30 .................................... GCCGTTAAGCTCAGAAAGAATAACTAAATT 1627699 36 97.2 30 ...................C................ TAAATTACACGTTCATCATTAACAACATTA 1627633 36 100.0 30 .................................... GTGGACTTACGACACTGCCCATGAAGTTGT 1627567 36 100.0 30 .................................... TACTTACTCGGTAAAACAGATATCGAAACC 1627501 36 100.0 30 .................................... CTTATTATTAATTCATCAAGTAATTAAGCA 1627435 36 100.0 30 .................................... TTTGACCCCAAAGTGCCCTCAAGCCTTGAT 1627369 36 100.0 30 .................................... CCTAAATAGGTTATCATTGGTCGCGCGAAC 1627303 36 100.0 30 .................................... TTGTAACGGATGTTACTCCGCAGGAAGGAG 1627237 36 100.0 30 .................................... CAATGTTGTTGTAATGATATGTGTTCTATA 1627171 36 97.2 30 ..........A......................... GCATTTGAGCAGTGAATTCCCCACAATACG 1627105 36 100.0 30 .................................... CCGCATTGACCATGGAATATCCCATTTCAA 1627039 36 94.4 0 .................G................A. | ========== ====== ====== ====== ==================================== ============================== ================== 31 36 99.6 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGGATGGGCAACGTAACCAAATTCACGATCAGGTCAACCAACTATTTAATACGATTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTACTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGGTTTTGAAGATCCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAGCTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATCGAATTCACAGAAATGGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAATAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : TGACTGAAATTAATAAGAGTTAACGTTTTAAGGAAGTTATCAATAGTATTAGTAGTGAACTTTGAAGAATGGAATTTTAATGAAACTACTAGTTACGGAGAATGATAAACTACTAAGGTTCAAATGAATTTATAGGTTTAGCATTATTACTCGAAGACGACGTTTTAGTGGTGGTTGGAAATAAAATCCGCTCGAAACGATCGGGTGGTTTTCAGTTTGTAAAAGTATACCAATATATTGATATAGTAAATGCATAAAGTTAAGAAAGTGATAAAAACTGGATGATGAAGAATAAAAAGGCATCGCAATAAGCAAATGACAATAGTGACACTAATCATTCAGACGATTACAGATATTGTACAACTCATCACAATGCTTAAAAAATAGGTAAAAGAGGCGATACGTCTCTCTTCTGTTCATCAATTTTAAAATGGAGGCATTAAAATGAAAAACATAGAAAAACTACAATATTTAACTTTGACTATCAGTGTCGTTGCTCT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //