Array 1 1019062-1020624 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH992901.1 Mastigocladopsis repens PCC 10914 Mas10914DRAFT_scaffold1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================== ================== 1019062 36 100.0 37 .................................... CAATTACAGTAGAGGAACCAATAAAAGAAAGAACCAC 1019135 36 100.0 41 .................................... GCTTGTGCAGGCGTGACAATCAAAAAACCAGCAACAATCAA 1019212 36 100.0 41 .................................... AAACGTACATCACTTTCAGCCGACATGCCGGTTTCCATCAA 1019289 36 100.0 35 .................................... AAGCTACAAGCGCATGCAGGTCGCACCCTCCCCCA 1019360 36 100.0 36 .................................... CAATCCAATGCACGGAGCATCTTGCTAGTTTAAAAA 1019432 36 100.0 36 .................................... AACAGGTTTCCACTTCTTGGTTTTGGGTAATTCCTT 1019504 36 100.0 37 .................................... GTTAATAATTCGGGGGACAGCTTGGGGTTGCGCGACC 1019577 36 100.0 33 .................................... CAAGATGCTAGTAAATCTACGTTTTTACCTACA 1019646 36 100.0 35 .................................... CACGGATTGTCGTCCGTAGAGAACGCTATCTTCAC 1019717 36 100.0 39 .................................... CTGATTTTGCAAGAACCATCCGAACAGGTAAACGATAAT 1019792 36 100.0 43 .................................... GAGTACATGGCTTTAGCGTTCACAGGTGCAAAGTGGGCTTCAA 1019871 36 100.0 41 .................................... GATGCCCGTCCACTCACCGCCTATGCTGGAATGATCGTTGA 1019948 36 100.0 36 .................................... GTGCTGACTTCATTTCCGTCAAGGCGATATACAACT 1020020 36 100.0 39 .................................... ACTGGAAAGGTTATCTTTCCAGTTCGATAATTCCAACGC 1020095 36 100.0 34 .................................... CTTCCTCTTCCTCTTCCTCCTGCCGGCTGGGCAA 1020165 36 100.0 37 .................................... GCGATAGCGGCGATAGCGGAAGCAGCAGCAACGATTG 1020238 36 100.0 36 .................................... CTGCGACTCTCATTTCGAACAGCATGTCATTCAACA 1020310 36 100.0 35 .................................... ATTGGGATCCTTTCCTGGGTTGGCACCCAGTTTTC 1020381 36 100.0 37 .................................... AAATGAGTCGGCAGAAGCCGGATCAATGGAGCCAAGT 1020454 36 100.0 33 .................................... AACTTGGGGTATGTCGGGAAAGCCCTCGGGCAG 1020523 36 100.0 30 .................................... CAAACTGTTTGCACGGAATATGTCCCAGTT 1020589 36 94.4 0 ..................................TT | ========== ====== ====== ====== ==================================== =========================================== ================== 22 36 99.7 37 CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Left flank : GTGTAAATGCTGGTGCTTGTTGTGTATGATATTCCTGATGATAAAAGGCGCACGAAGTTATCTAATTTTTTAGAGGGATATGGGCGAAGAGTCCAACTTTCTGTGTTTGAATGTTTTTTAAGTTTGGAGGAAATGCGAGAACTTTATGCAAAGGTGAAAAAGTTAGTGAAACCAGTGGAGGATAATGTGCGGTTTTACTGGATATCGCAAGAAGCAGTGTCGAGAGTGCTGACTATTGGTGGGGAAACACCTCAACCACCGCCAAAGTATTATGTCATCTAGGTTTGGGGAAGATTAGGGGTGATTTTTAGGTGGTGCATCGACACCACTCGCCAAATCGCCAAAACCCTATATTTTTCGTTGAGTGGTGTCGATTGCTTGTAGGGCAAAGGTTTGAGGTATGTGTGTTGCTCCATTTTGCACAACATTTATAATGTTTTTTAGAGTGGTGTCGATTTGGCGGCTGAAATCCTTACTGGGTAAGGGCTGCTAAACGAACT # Right flank : TTGACGAAGGGGTAATAAATCAAAAAATAAACCCTCCATTTTCTGGAGGGATTTTTTACTAAAAACATCGCTACGAAGTTACTCACGCCACATTCAACTTAGTATACTTAGCAATTTTGTATTGAATATCATCCAAAAAAATCACATCATTGGCTATTTCTAAAAGCTGCTGGCTTAACATAGCCTTTTTCGCAACTACGGTTACTTCTGCACCACGTCGTTGAATTTCCTCAAGAGCAGGTCTAAAATCACCATCACCACTCACAAGAATCACCCTATCTTGCTGTTTCACTTCTCCCAACATATCAACAGCAATTTTTACATCATCACCAACAGTTTTAACAGTATTGCTATCAGGTCGAGGTAAAATAGGAAGTCCAATAACTTCATAACGTAAACGTTCTAAATAACTAATAAAACGTTTTTGTCCTTCACTTATGGGTGAATGAACACCAGTGTAATATTTAAAAGTGGTAACAGTTGCATTTTGAGAAAGTTCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTACCGATTGGGTTAAATCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 3470931-3470384 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH992901.1 Mastigocladopsis repens PCC 10914 Mas10914DRAFT_scaffold1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 3470930 37 100.0 36 ..................................... GTATGCCGTTGATGACCAGGTTCCTCGGGTTCTGAA 3470857 37 100.0 39 ..................................... AAGCAGAATGTAGTCAGAGCACTTGACATATGTGTCCGC 3470781 37 100.0 35 ..................................... TTTTGTATCCCGCTTCTGCTTGTAAACCTCCACTA 3470709 37 100.0 35 ..................................... CGGTAGCCTTCTTCGGATGGGTCGTCTAATCTCCA 3470637 37 100.0 36 ..................................... GGGCAATTACGTGATGTAATGATGTTTGCAATACTC 3470564 37 100.0 35 ..................................... ATCGCCTCTTCAACGCGCTCTTTTATCTCACAATA 3470492 37 100.0 35 ..................................... CGGTAGCCTTCTTCGGATGGGTCGTCTAATCTCCA 3470420 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 8 37 100.0 36 CCCGCACCGATTGCGTTAATTCGGATTAGTTGGAAAC # Left flank : CACCCCCCTTGGCAAGGGGCGGGTGGGGTTATCTAGCGCGTATTAAGTCATTTTGCAGTATTGCTCACAAAGAAGCACTAATCAGCGTAATAGCACAAACTAACCAGGCTTGATATAAGAAGCGATCGCATCCGCAGACATCGAGCAGGACTAGAACTATTAGCCGACTGGGAATTTAACAGCATTGGCAAAATCGTTGGTAAAAAGTTAATGCTACTTGTCTGTACAAAGTCCATTACAATTGACAAAATCTCGACAAAAGCAGATGATCGATTTATAGTTTGGTTATCAGCTTGATGTTTGGCAGAGCGAAGCGGCGGCTAAAACCTGGAGAGTTCTGCCAAAAACTCCAGAACCTAGACTAGTAAATATTTTGAAGGTTTGAAGTGTTGAGATAAATGAAAAAAAGTCTCAACAAGTATGGCTGAAATTAACCTCTTTTTGAGGTCTGCCAAAACCCGTTCTGGAACGCTTACTATGTAACGTTTTCAGGGCACAGA # Right flank : TCGACCTCGATCTTTTTGCGGACAAAGGTCAATCACTCCCGCACCGATTGCGTTAATAAACGCAGATCATACAAAGGCAGAGGCTTCGCTAGTTACATAGTGCGATCGCATCTCATGCATGGCATCAAATTAAAACCTATCCTTAATCAAATTCCTACTGCTATTGACCTGCAATGAAAGGTTGATTGGACTGAGTTTAGATACTGCTCAAAGCTTCTACCAATTTCTCAATATGCGCTGCTTCATGAGTCGCCATCACAGAAATCCGTATCCGACTCGTAGGAACGGTGGGGGGACGAATAGCCGGGGCAAAAATGCCAGCAGATTTCAGATGTTGTCCACCTTTGAGAGCATCTGCTGCACTGGGCAATTGAAAGCAGAGAATGGGTGACTCAGAGGGTAGTAATATCAACGATAGTGACTGCTGTTGGATGACGTGTTTGAGTTGGGCTACATTCTGCCATAATTGGGCGCGGCGTTGCGGTTCTTGCTGTACTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCGCACCGATTGCGTTAATTCGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.60,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 5385777-5383316 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH992901.1 Mastigocladopsis repens PCC 10914 Mas10914DRAFT_scaffold1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 5385776 36 100.0 36 .................................... ATAGTGCATCCGTACTGATTGGCAATTTGCACCAGT 5385704 36 100.0 36 .................................... ATTTTTATCTGCTTATTACTTATACTAACGAAGTTA 5385632 36 100.0 34 .................................... CTTAACAGAAGGTAACAGTATATCCTTTAATGGA 5385562 36 100.0 37 .................................... TAGTACTGGGCGCTATTGTCCTCTGTCGCTTCAGACG 5385489 36 100.0 35 .................................... AAAGGAGCATTATGAACTTACTCGAATTTGTACAC 5385418 36 100.0 37 .................................... AACGGCGGACAGCGAAGCCAACTAGTTCCGATTGCGA 5385345 36 100.0 37 .................................... AAGAAGTGTTAACAGAAGCTGGGGGGAAAGTTGGTAA 5385272 36 100.0 36 .................................... ACGTTAATCAGATACAGCTTTTCACGCTTGTTCATT 5385200 36 100.0 36 .................................... TTAGAAATTTGGACAATAGGGGACAGATGCTCGGAA 5385128 36 100.0 34 .................................... ATACACATCAAAACTCGATCCCGGAGATCCAGAT 5385058 36 100.0 35 .................................... TAATCGTCCATACCTTTAGCTTCACCTTCTGGTAG 5384987 36 100.0 34 .................................... ATTCTTTTTACGGAAAGTCTCTCATGGTGTGCAA 5384917 36 100.0 35 .................................... AATTTTCAGCTTAAACCTTACGACTTCCCCGACTT 5384846 36 100.0 35 .................................... ACGAGCAATACTCTTTAAGCGATAATTGTTTTAAG 5384775 36 100.0 36 .................................... ACAAAGACGAATGACTGCCAGCGCTCAAATGTAATC 5384703 36 100.0 35 .................................... GGCATCTAGCAATGGGTATGCCCTCAGCATTGATG 5384632 36 100.0 34 .................................... AAGACCTTTTGCTTTTGCAAACCACTAACGGCTT 5384562 36 100.0 34 .................................... GAGAAGTTGGAAGCAAGGATAACTCGCTAAGGTT 5384492 36 100.0 35 .................................... ATTTGGAACGAGATAGGCATTAACTCCTGTACCCT 5384421 36 100.0 36 .................................... TCTCCGGGCAATTTGTAAGCACCACCCAATTCAATT 5384349 36 100.0 36 .................................... CTGGCGATGCACGGCGCGCCAGTGGTGCTCGCATTG 5384277 36 100.0 36 .................................... GACAAGGTTTTAAATATCTTTATGACGATTTAATTG 5384205 36 100.0 37 .................................... TTTCTTTCTTTCTTCCAGCGCTCAACTCGGTCGCAAA 5384132 36 100.0 35 .................................... CAATCCAAAATCAGCATCATCGGTGAGCAACTCAC 5384061 36 100.0 34 .................................... ACCATTACCTGCTTGCCCTCAATGGCGCTAATGA 5383991 36 100.0 35 .................................... TTTTTTAGTCAGCTTAACGAAAAGATTGACTATAA 5383920 36 100.0 34 .................................... TCTGCTAATGCTCAGCAAGCTTTGACAGCTTATG 5383850 36 100.0 35 .................................... CTTCTCATTGGGATGAGCACGGAGATGAAATAACT 5383779 36 100.0 35 .................................... ATTTTTCTGGCAACAACGTAACCTTTACGACAGAG 5383708 36 100.0 38 .................................... AAAGCCTACGTAAGCAATCGCTGTCCTTTGAGCAGAGA 5383634 36 100.0 36 .................................... GGTTGCTTTTCAAAAAGCCATGAAACAAATAGCCGA 5383562 36 100.0 34 .................................... GTAACTACGTACCCGTCTTCAGCTAATTTGATTA 5383492 36 100.0 35 .................................... AGTTGTTATCAACGGATTCAGTCTTGGTCAAAACA 5383421 36 100.0 34 .................................... AAAGCTAAGAACGAAGCACTTGCATTAGGTATCA 5383351 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 35 36 100.0 35 CTGCCCAAACCTGTGATGCCGTAAGGCGTTGAGCAC # Left flank : AGCTTACAACCTACTCCAAGGCTATGGCGAACGAATACAATACTCTATTTTTCGCTCTTGGCTAAGTCAGCGATCGCGAGAGAAATTACGCTGGGAGCTAGAAAAGATATTAGCCCCAGAAGATACTCTACTTTTGATTCGTCTATCGCACCAGTGTGTTGCTGGTATACCAGCTTATAACCGTCCGGGTGCTTGGTCATTTCCAGAGGAGGCATACCGCATTGTCTGATGCAAGGATCTGTGAGTGTGAAGTCTTAACACAGAAAAACACAAGAACAAAACTCCCATTGGGCTTGCTATTCGAGGTTTTTAGACTAACGATCAGTGCTTGCATTTTCTCTAAATGACCTGAAAGTTAGCCTATTCAAGGGTTTTTAAAATTGTCTGCTATCCTTAGGGTAAAGTTTGGGTAAAAATTTAGCTACTTTGTTGCTTTCTAAAGCTAGGTGCTTGTAATATCAGAGCCGGGTGGTTATCTGATATGGGTTTCAGCAAGCGGA # Right flank : ATTTTTTTAAAGCGAAATACTAGACCGTCAACAGATTGGGTAAATCCCACAGCTGCTGGACTACCATCTTGTCTCTGGGTGAAGCGAATTGTCGTATCAAGTTCCTGGCCATTGTCGAAGCGGATGTTAGCATGAGATGCGATCGCTTTTCTAAAACTGGGTTAAACAAAATATCATAGCCTTGATAGGCGATTCTGTCCCGTCCATAATCAGAAAGCACCACCACCGTCCAAGGTCGCATGGTTCTGCGTCGTCCCGCCCGTCCTTTCCTTTGCAGAAATGAGGCCATATCTCGCGGTGCTTTGTGCTGGATGACATCTCCAACTTCTGGATCGTTAAATCCCACTTCCAGGGATGCAGTAGCAACAATCACGTCTGCATTTGGGGTAACTCCGGTATCTTGGGAACTGGTGCGCCCAATATTCAAAGGAAGTTGCAAACCGTGACCGATTTCTTGGCACAGCAGCCAGGATTGACCAGCAATCAGCCTTTCTCTACCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCCCAAACCTGTGATGCCGTAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA //