Array 1 13046-13205 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE386795.1 Veillonella magna DSM 19857 G344DRAFT_scaffold00001.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 13046 29 100.0 37 ............................. ACTGTAACAACACCTACAGCGCGTACCGCTTCTTTTA 13112 29 100.0 36 ............................. CGGAGTAAATGCCGAAGGATTAAAAGATCGTATTGA 13177 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 3 29 100.0 37 TTTAAATTCTACTGTAGTAACAACTGAAG # Left flank : CAAGACGAGGTCATCGTCTCTCTGTTAGAGCGCAAAACACGAGCGTACGTAACACTTAGGTCTCCTTCAGCTAAGGCAACCGATATTGCGATTACCTTACAAAATTGGTTGAAACGCTGCAATGAAGCCTTAGATGGCAGGGCGTTATGTAAAACGATAACATCAGATAATGGACTGGAGTTTTCCTCTATCACTGATTTAGAGAGCGATACACTTCAAATCTTTTTTGCTCATCCCTATGCCGCATGGGAGCGTGGCTCTAATGAAAGACACAACGGATTATTACGTCGTTTTATTCCTAAAGGTACACCTATTCACACAGTATCTGAAGCAACTCTTAAACGAGCAACAGATTGGTGTAATACATTACCTAGAAAAATTCTCGGTTACCGTACACCGCAAGAGGCATTCCTTGACGAATTAAAAAGCTAACGGATGTAGATAGTGTTCAATTTCATATTGCAATTTAGTATTTTTTTTCATCAAATTCAAATTTAATC # Right flank : GCCTAACACTCATACTGCAACGGCGGTGCAGATAAAAATAAGCATTTCTGTCGAACAGCCACTCTTAAGTATTTTGATGAAATCATTATGCTATAAATTTTTCATATTTACAAGTTTTTGAGCTATTGTCGATAGAAGGGAAAATAGATCATGCCAAGGGTCGACAGAGATTATTCAGTGAGGCTGTGTCTGAATGATACCACTTGGTGTGTATTCTAAGTGATGGCAGTGTAGGCGCTTGATGACTATGATATACTGAGATTGGTAATAGCTAGTAGAAAATTACATAATAAAAAGGCCTTTACCGATATACTAGGTATGCATGAAAAAATAGCAGCAAAAGTATGGGATACAAATCATATGATAAGAATGTAGGCTTTTGGCTGATTCATGTATACTTTCACCGAGGTGATGGCTATGAATCAAGCAATATATACAAGAACGATATTTGTTGTACAAACGCTTCTATATCGAAAAGGAACTGTAAGCCAATGTCCCAA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTAAATTCTACTGTAGTAACAACTGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.41%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 2 415266-414834 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE386795.1 Veillonella magna DSM 19857 G344DRAFT_scaffold00001.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 415265 36 100.0 30 .................................... GGTATCTATAGCCTTCGTTGTATAACCGTT 415199 36 100.0 30 .................................... TGAATAGCGGTAATGTAGTTGCCGAAGTCA 415133 36 97.2 30 ...............................G.... CCGTCATATTATTAACCTTGCCGCCTTTTT 415067 36 100.0 30 .................................... AACGTACCTTCAGGTTTAACAGCCGTCACT 415001 36 100.0 30 .................................... CTACGCGTAAGAAGGCGCGGACATTGCTCA 414935 36 100.0 30 .................................... ATCTCGTCTGTGGTTTCGTTATGAAGAATC 414869 36 97.2 0 ............................C....... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 99.2 30 GTTTTAGTACTCTGTAATCTTGTAGTATGATAAATC # Left flank : GAGTTCAATTTATCATTATCATTTTATTAGTAAAAATCATATCTGGGGAATGGAAGACTTTGATGAGCTTTTATATGATATTAAGGAATTTACTGGCAAAACTGATGAGAAAAGAATCACAGAGGAGTTTGTTACACAAATATTTCATGAGGAGCAGTTTGTGAATCAGTACCCATATTTAATTTCCAAATATTTTATGCTTGACAATTAGTAAGAAGAGCATTATAGTTTAAGTAGAATTTATCATACTACAAGGTTACAGAATCTACTGAAATAAGATTTTATATCGAAGTCACACTGAAAAGTGGTTTGTTTTTAGTTTAATAATTGCTTGATTATGTAGATGGATTTCATTTGATTGTGTTTTAAATGTAGTTCTGTCAATTGGGCGTAGCTTATTCACTCGAGTAGGGTGGGTAGGTACGCCTTTTGTCGTATGGAGATAGTGATTTAGATTTATTATACAAGAAGGTTACAAAGGGCTTAGATTTGGTCTTGAG # Right flank : TATGAGAGTAAAGAGAAATTATCGGAAGGAATATGGGCGATTGACGTTGCGGATCAATTGAAGATAGGCTATAATGACGGCGAAACATAAATATCAGTGTTAGAGTGATATAAATACGAAGACCAGTTAGGTTTTTGGGAGGTGTTACTGAATGAAGGAGAATAGAAACGGAATGTATCTTGACCATGATGATAGATTCATTATTCCTGACGAAATCTTGCAGATGAGTAGCGCCGAACGGCAAGCATTACGAAAAAATATGAGCTCGAAGATGTAAAAAATGAGAATAAGGATGATTTATGAATTCTCGTACTGAACCGCCTAGGTTATGTAGGCGGTTTTTTCATACCCATTTTTAGGGGGATTTAATGGTGATGTGTATTAGCTATGATAGCGTAGTGACGCAGATATGCAATATGCTAATTGAGGCTAGTCTAGATTATGATACTCCGCGTATAAGGTTGTTTGTGCAAAGCTTTGTTAAGAAGGTATTTGACTAT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATCTTGTAGTATGATAAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //