Array 1 1-564 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPPR01000563.1 Prosthecomicrobium hirschii strain SM57 SM57_contig_564_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================ ================== 1 35 100.0 31 ................................... CCTCCTGGTGAGCGTCACGAGATCGCGAGAA 67 35 100.0 31 ................................... AAGTCCACCACCTACATCGTCACCGAAGCTA 133 35 100.0 31 ................................... CACCGGGCGTAGGAGAGGGCCATGAGGGACA 199 35 100.0 32 ................................... GTCCCATGATGTTGGGATCATTTTTTTAGAAA 266 35 100.0 31 ................................... GGCGCCGGATCGCTGACCCTATCGGGCGCAA 332 35 100.0 31 ................................... GAAAACGCTGACGACGCACCTTTCGCCCCTC 398 35 100.0 31 ................................... CATTCTCCGGCTTTGACGAGGACGAGGTCGA 464 35 100.0 31 ................................... GCGCGAGCGCGCGATCGAGCGACGCGATAAA 530 35 97.1 0 .............................T..... | ========== ====== ====== ====== =================================== ================================ ================== 9 35 99.7 31 TAGTACCGAAGGGAGAGACGGCCGCAACCCGCAGC # Left flank : | # Right flank : CCCAGTCCAGGCCACCGGCCAGACAAAGCCGCCCTTCAATCCCAGTGAAGCCGTTCCAGTCCCGTCCCCGCCGGCACCTCGATCCGATCCATCGCAGCGATGAGCGGCTTCAGCGAATAGCCTCTGCCATAGGCCCGTCCGGCGGAACCGCGCCCAGCATGTCCAGTCAAGGCGTCATGGAGGGCTTCTTCGAGGCCGGAATCTCGTGCCATGCGCTTGAAGCTGTGCCGAAAGGAGTGAAAGACTTTGTGGTCGTCCTCGATGCCGACCGTATCGCCGAGATAGCGGCCGAACCATTTGGACCATGCAGCGGAGGCCGGTCGTCCGGTGGCGGAGACGACCTCGTTCCAAAGCCTGTCGGTCGGCGCCGCTCCGCCTCGCACCCGGGCCTGCCGGTATCGCAAGAGCCCGATCGTCTCCAGAAGCGGATGGAGCGGAACGCATCGGATCGACGAAGCGGTCTTGAGCGAACGACCGCCTTCCGGACTCACGTCGAAGAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAGTACCGAAGGGAGAGACGGCCGCAACCCGCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //