Array 1 165591-163439 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZOV010000001.1 Streptococcus sanguinis strain MA17 Ssanguinis_MA17_Nina_Sia_YES_0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 165590 36 100.0 30 .................................... TCGTAAAACTATCATAAATCGACAAAATAA 165524 36 100.0 30 .................................... GCCTGTTGTTTTTGTCAAAAAAACTTGCTT 165458 36 100.0 30 .................................... ATCTACGAAACCTTGTTAAACGTCCGAAAA 165392 36 100.0 30 .................................... CAACTATAAACGTTGTAACAAGAGCCAGGA 165326 36 100.0 30 .................................... GATTTTCAATGACTTGTGTCTTAGATAAAC 165260 36 100.0 30 .................................... CTATTGTTATCCCGTTTATCGGTATTCAAA 165194 36 100.0 30 .................................... TCGATAACTTCCTCGGCATATAGGTCGTTG 165128 36 100.0 30 .................................... ACTCTATTCGTTCGGCATTGAGGATAACCA 165062 36 100.0 30 .................................... ATTATCTTCTTGATTTATCGCCCATTCATA 164996 36 100.0 30 .................................... AAGCTTGGTATCGTCATATACAGCCGTTTT 164930 36 100.0 30 .................................... TCAGGCCGGCTTTAGCCGGCGAGCGCCAGC 164864 36 100.0 30 .................................... TTATCTTGCTGTCCGCTCTCTCTAGCAGTT 164798 36 100.0 30 .................................... CTACACATTGATAACCAAATCCAAAGTTAT 164732 36 100.0 30 .................................... CGTTAACAAATTGTAGAGCGTCACCAGGAT 164666 36 100.0 30 .................................... TGGTGGTGTTTGCTCAATATCATTGATATT 164600 36 100.0 30 .................................... CTAGGCTGAACAGAAACAGACTGGGCAGGA 164534 36 100.0 30 .................................... AGATGATTTCATGAAGTTTCTTTGGTCTTT 164468 36 100.0 30 .................................... GCCTAAAGCTTTTGAAAAATTATCGGTATA 164402 36 100.0 30 .................................... AGTCCTTTACATTAAGCAGCACCCCGAACA 164336 36 100.0 30 .................................... TTTCTTGATCCGCTGTGGACAACCCCCCCA 164270 36 100.0 30 .................................... TATTTGATATGACTACAAACGTTATCTTGT 164204 36 100.0 30 .................................... CGCTGCCGTGTCTCCTGCATTATCAGGGTC 164138 36 100.0 30 .................................... TCGATACCGATGGACTGACAGTTGGTGGCA 164072 36 100.0 30 .................................... TTCTATTATCTCCAAGAAATTGCAATCCAT 164006 36 100.0 30 .................................... CCAAAGACTTCTCGACCTTCTCCACGCATA 163940 36 100.0 30 .................................... CGAATATCATATTGCACGACAGAGGCTTCC 163874 36 100.0 30 .................................... TGAAACTCAAAACGCACCCAAGAACGAAGA 163808 36 100.0 30 .................................... CCTTGTAAATAGGTTTCGTATGGTCTGAAA 163742 36 100.0 30 .................................... ATACTGGACATGTAAGATTATTTAAAGATA 163676 36 100.0 30 .................................... TAAATGACTTGCCAGTGACTTTGTTTAGAT 163610 36 100.0 30 .................................... TCTTCTTCTCCTCGTACCAGCCATTTATCC 163544 36 100.0 30 .................................... TAACCATTTTTAAGAAGCCATTCAGTGATG 163478 36 83.3 0 ......................TT.TT..A.....A | T,T,CA [163442,163445,163449] ========== ====== ====== ====== ==================================== ============================== ================== 33 36 99.5 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : TCAACTAAATGATAAACCAGAAGTAAAGTCAAAAATCGAAAAGTTGTTAGTTGCGATTACAGAACTGCTGGGGTTTGAGTGTTTGGAAAATGAATTGGATCTAGAGTACGATGAAATCACCATTCTAGAGTTGATCGATGCGCTAGGAGTCAAAGTTGAAACTCTGAGTGACACACCTTTTGAAAAGATGCTAGAAATTGTCCAAGTTTTTAAATATCTTTCAAAAAAGAAACTCCTTGTTTTCATCAATGTGACCGCCTATCTATCAAAGGATGAGTTAGGAAATCTGATAGAGTATATCCAACTCAATCAACTAAGGGTCTTATTTGTCGAACCTCGGAAAGTCTATGATTTACCGCAATATGTGCTTGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATTAAGAGTAACAATTGGAATCTGGCGAGCTGAAGTCTAGCTGGGACGAATAGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : AGGACTGTTTTATTCAGTCCTCTTATTTTCTATTTCCCTAGGCAGAATTGGCTGAAGAGTTGGGTGATGAGCTCGTCTGGTGCAGCGTCGCCAGTGATTTCGCCAAGGATTTCCCAGGTGCGGGTCATATCGACTTGGAGTAGATCTACCGGCATACCCATTTCCAAGCCTTGGTTGACGGCTTGCAGACTTTCCAGAGCTTTTTCGATCAAGGAAATGTGACGGGCGTTGGACAGGTAGGTAGCGTCTTGCTCGACGATACCAGCATTTTTAAAGAAGAGCTGATTGATGCGTTCTTCAATTTTATTGATATTTTGATTGTGGAGGACAGAAATCTTGATAGCATCTGCTGGCAGCTGATCCAGCTCAATCTTTTCCTCAAGGTCAGTCTTGTTAAGCAAGACGATACGATTGCTATCTTGACTGATTTCGAGCAATTGTTTGTCCTGATCCGTCAGAAGCTCGCTGGCGTTTAAAACTAATAGAACCAAGTCAGCTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //