Array 1 46427-42610 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIQX010000005.1 Niastella sp. SYSU D00799 NODE_5_length_463548_cov_14.146408, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 46426 47 100.0 30 ............................................... CTACTGCTGGTGGTGTTGCTGGTAGGTCCG 46349 47 100.0 30 ............................................... TTTGAGACATATTCATGCCGATTCCTAATG 46272 47 100.0 30 ............................................... AGCAATAAACGAATATGAAATACAAATCAA 46195 47 100.0 30 ............................................... GGTGAGTAATACCGAAGACGTTTAAAGAAG 46118 47 100.0 30 ............................................... AGCCGGTTGACGGGGAAGTATGCAAAGGAG 46041 47 100.0 29 ............................................... GAATATGTTATGCTTAAAGGTGAGTGCAG 45965 47 100.0 30 ............................................... TGAACTGGAACCTCATGCCATTAGCCTTAT 45888 47 100.0 30 ............................................... GATTGCTACTTAGGTTTACGCGTATCGGAT 45811 47 100.0 30 ............................................... TGCTGCCGTCGATTAATACAAAATCGTTTA 45734 47 100.0 30 ............................................... CCCATGCCAAATGTGCCTAGCTTGGGTGCG 45657 47 100.0 30 ............................................... TGACATGCACATTAAGTCGATGAAAATATC 45580 47 100.0 30 ............................................... CACCATTGGTATAAATCGTCCCTTGAAACT 45503 47 100.0 30 ............................................... CGGGCCGCGCTATAGGTACGTCCGATGAAG 45426 47 100.0 30 ............................................... AAGGATGAAAGGAATACATTTCTTATTGTA 45349 47 100.0 30 ............................................... AAGAAAGCCGCTGAATATCCAGACGAATAG 45272 47 100.0 30 ............................................... CGCATTGTTATAGTTTACCGGTAGTAGAAA 45195 47 100.0 30 ............................................... CAACATGATAGCAAGGATACACTGATTTAT 45118 47 100.0 29 ............................................... CCAAAGGTTATTGAAAAGAAAGATTATAC 45042 47 100.0 30 ............................................... GCAATTGCCGATGCGTTTATTACGTAATCA 44965 47 100.0 30 ............................................... GAAGGGTATGATGGTGTTGAGGGTGTTGTT 44888 47 100.0 30 ............................................... AGGGCTTTTCGTAAGATACTTATAAATCCT 44811 47 100.0 30 ............................................... TTAAAAGACTTTTGAACTGTCTTGTAGACA 44734 47 100.0 30 ............................................... AGATGATGCAGGCGATTTTCACCCTGCTGA 44657 47 100.0 30 ............................................... TGTTATAGTCCATCGCCTTTTCAGAAAGTT 44580 47 100.0 30 ............................................... CAATCACGAAAGCAACCGGTAAGGTGTTTC 44503 47 100.0 30 ............................................... ACTGAAACGATATACTTTGAACCTTCCCAG 44426 47 100.0 31 ............................................... CAGGAGGCCATCATAATCGACAGCGGTTATT 44348 47 100.0 30 ............................................... GGAACCATTACAATCTTACATGAAAAAATA 44271 47 100.0 30 ............................................... TATGTTCTTTTATTCTGTCTCTTAATTGCT 44194 47 100.0 30 ............................................... ATTGGGAATTGTTAAGTTATATAATCTGTA 44117 47 100.0 29 ............................................... TATAACCCCTTATATTGATTTTTACAGCC 44041 47 100.0 29 ............................................... TGTCGATCATAATTCCAATGTTTCAGTTT 43965 47 100.0 31 ............................................... TAAACGTTGGTGTGTATGGTACCGCGTCCGA 43887 47 100.0 30 ............................................... ACTTCAATTGTTTTACCAACCGTTCTATCA 43810 47 100.0 30 ............................................... GAGAAGGAGATTTGAGCAAGTGCCGCCAAA 43733 47 100.0 30 ............................................... CAAAGCGAGGCCGATGCGAGATCACAGACT 43656 47 100.0 30 ............................................... TATGGCTTCAAGAGCTTTTCTACGGATACA 43579 47 100.0 30 ............................................... AAAACACGAACGCGACAGGCTGGACGGGTA 43502 47 100.0 30 ............................................... TGTCCTGACTGGACGGTAATCGATTATACA 43425 47 100.0 30 ............................................... TGGCGGAGCTGGCGGGGGTAAATCCTGGCT 43348 47 100.0 30 ............................................... ACACCGAAGCGCAAGGATCAGAAGGATCTC 43271 47 100.0 29 ............................................... GTGCAACGCATAATCTTATTGTTTGAAAA 43195 47 100.0 30 ............................................... TCGTTCAGACATTAATACCTATCGTCCATC 43118 47 100.0 30 ............................................... CAAATTATTGTTAGATAAGAAACAATATGA 43041 47 100.0 30 ............................................... TAGTATGGGCTTCAGGTCAATGTAGTCCTC 42964 47 100.0 30 ............................................... TGCGATATTTTTAATTGATTTTAAATCAGG 42887 47 100.0 30 ............................................... AGCAGTAAACGGTATGTTCCATAGCCTAAA 42810 47 100.0 30 ............................................... ATGTGGGGAGGTCCTGTATATCGAGACAAG 42733 46 87.2 31 .............T...C.........-....C...C..T....... GGGCCAAGGCATAATTAAGCGAGACCAACCC 42656 47 95.7 0 ...........................T.................G. | ========== ====== ====== ====== =============================================== =============================== ================== 50 47 99.7 30 GCTGTCGCTGATCCAATGTACAGAATAATTTGAAAGTAAATCACAAC # Left flank : CCTGAAATGGAATGACTTTCATCCGACTATATCTCTTTCCCAACGGTGGAGATGGAGGAAGCCAGCATTTTGAACGCTTAAATGCCTATCGGATTATGTGGGTACTCGTATTCTTTGACCTGCCGACCGAAACCAAGAAGGATCGGAAAATTTACGCGCGATTCCGGAAGGATATATTGGCATACGGCTTTCAGATGTTCCAATTTAGCATTTATTTACGGCATTGTAGTAGTAGGGAAAATGCCAATGTACATATAGCAAGAGTAAAAAAGATACTGCCAGAAAGGGGGCATGTTGGCATAATGTGTATTACCGACAAGCAGTTTGGGATGATGGAAATCTTCCGCGGGCATGACCAGGTAAAAGCTCCGGAAACAGTTCAACAGTTGGAACTATTTTAAAAATCCGTTTCCCAGGATTGAAAAAAGCCATTTTTCCGTCAATTTTTCATTCTAAAAAACAGCCAGAACGCAGAACAGGACTGGGTTTTAGCCAATTCT # Right flank : CCGCTGCCCCAAAACCCCACTACAACTTCTTAAACATTTCCAACATGGTCAGTTTATCTAAGGGCTCCATATCAACCAGCTTTAATGCCTTGACCATCTTCTGGGTAGACGTTTTGTAATGTTTGAAATGAGGCGTTCTTAAATGGGATTCATACGCGTCCTTATTCGCATAAATTTCGACAATCCTGATCTGATTAGGCTCACCTTGCTTAAACATCGGAAATATGGCAATTACGCCCGCTTCCTTTTTTACAGACGCGGCCGCCTCCTCTCTAAGTATATCTTTATAGTCATTGAGATATTCAGGAAAGATCTCTATCTCAGCAATCCGCACCATCATATCTTGATTAGCCTCCTGCTGTTGTGCGCTAGTTCTTGATATGCTTAAGATTAATAAAAGAACCAAAATGATTCGTGTACTTATACTTGAAGCCATTGCTATTCATTAATATAATTCAGGATCAATGCCGGCTAAAGGTAGCCTCCGTTTTGACTTATCG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTCGCTGATCCAATGTACAGAATAATTTGAAAGTAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //