Array 1 18481-17382 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTSZ01000001.1 Enterobacter hormaechei strain ENT5 NODE_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 18480 28 100.0 32 ............................ ATTTTCCGGAAGGGGAATAAAATTCTTCTTTT 18420 28 100.0 32 ............................ ATAAGCCTCCTGCTGGGGCTGGCGTTGCCGGT 18360 28 100.0 33 ............................ GGTGATGTGAGACAGAAATGGGACACACAAAGC 18299 28 100.0 32 ............................ GGTATATTCAGCCTCCCCCGTCACCACTTCAA 18239 28 100.0 32 ............................ GTCACCAGATTCCGATGACCAGACGATAATCG 18179 28 100.0 32 ............................ TGGCTCGCCAGCTCGATGGCCTCAAAAGCAAA 18119 28 100.0 32 ............................ GATGAGCTCGGTTCTATTCCGTATTCGTCAAT 18059 28 100.0 21 ............................ TGGGTAACCCAACTCTGCGCT Deletion [18011] 18010 28 89.3 32 A.C.G....................... TTACGCAGTTACAACTGAAGTGGATGCGGACG G [18006] 17949 28 100.0 32 ............................ CCAATGAACAGCGCAAAGGGCCTGAGCACTGT 17889 28 100.0 32 ............................ TCGACGAAAAGAGGGGTCTACGCGACCCCCAA 17829 28 96.4 32 .......................C.... CCGACGTTTCGCGCGTGCTTTGAACTGTTTTT 17769 28 100.0 32 ............................ GTCTCTCGTCGTATACCTTATAGTCATATTCA 17709 28 100.0 32 ............................ TGGTAAATCTCAGGCATGCCCCCTTCGCCGAC 17649 28 96.4 32 ..C......................... TTCGTCGTGCAGCTGGCGCATCTCGCTCTCAA 17589 28 100.0 32 ............................ TGTACCGGCACCAGACCGCTGTTTAGCAGAAC 17529 28 96.4 32 ..................T......... CTGCGCGCGAAGTTTCATTTAAGATGCAAATT 17469 28 100.0 32 ............................ AAGTCGGCCTGTCCTCCTGCTCCGTAACGCCA 17409 28 89.3 0 ..........TA.G.............. | ========== ====== ====== ====== ============================ ================================= ================== 19 28 98.3 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AACGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAACCGCATGCCTCTACTTGCAGGTAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGGATGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTCAGGGGGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTGATTTTTGCCCAGAATGTAATGTATTGATTTTTCGGTTAAATATCCTGGAGCGCAAAAAAGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGGTATTATTTCA # Right flank : TCATCGAGTGTAAGGCTGTGTGATTTTATTGTGCGCACCACCGTACAACCAACACAAAACCCGAAACAAAACCCAACCAATCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGCTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCG # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 29002-27954 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTSZ01000001.1 Enterobacter hormaechei strain ENT5 NODE_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 29001 28 100.0 32 ............................ GTGCGTCTCGGTCGATGCAAAGTACGTCCCGG 28941 28 100.0 32 ............................ ACAGAGTCAGAGACCAGGCCGCCACCGAACCC 28881 28 100.0 32 ............................ AGCAGGTAGACGACGCGCGCCACAGACTGTGT 28821 28 100.0 32 ............................ CTTCCCGCGTCGGTCACGCAATCGGACATGAC 28761 28 100.0 32 ............................ GCGATATCGACGTAGCTGAAAAAGAGACAAAA 28701 28 100.0 32 ............................ AGTTCAAGGCTGGCATCTTTGAGCAGTATTAC 28641 28 100.0 32 ............................ GTGGAGTTCGCCCGTTTCTGGGTCGAAGACCA 28581 28 100.0 32 ............................ GCATTTTGAGGCCCATCGTTTTGATGGTCTTC 28521 28 100.0 32 ............................ GTTCTGGATGGCGCCGGTGCGCTTGAGCAGTA 28461 28 100.0 32 ............................ ATCGCATCCTTGACGGGCTTCGCCAGCGCAAG 28401 28 100.0 32 ............................ AGACGCTGTGTCATGTTTGAAATGGCCTGTAG 28341 28 100.0 32 ............................ TCCACGTATTTTTCAAAAGCGGCTTCGTATTC 28281 28 100.0 32 ............................ TTTGAAGCCGGTATAAGTATCTGCACCAAATG 28221 28 100.0 32 ............................ TGATTGAGCATTAACAGGGGCAGACTGTAGAC 28161 28 100.0 32 ............................ CTGACGGGTCCCGATTTTGCGCTGGGCGTGAA 28101 28 100.0 32 ............................ CTGCTCTTCGCGAAGACCAGTTAAAACATAAC 28041 28 100.0 32 ............................ GTAGACCCCGCGATGAATATTCCATACTTAGA 27981 28 78.6 0 ...................T.A..CCCC | ========== ====== ====== ====== ============================ ================================ ================== 18 28 98.8 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGTCTTGGTGCTTATCTGGACGTAGTCAAAACTGAACTCGCAGAATCAATGTGTGATTTCCGGGTAGTTGAATTTGACGACGAGGCGGAACGGCCGAAGGAAAAAGAGTGGCTTCTGGAGGATACCGAAACCAAATGCGATTACTGCCGGGCATTAAACCACGCGCTGCTGGTGTCGTATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACATATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCTGTAATTCATATCATTAATTAAGTTTAGTGTCGTGCGTCGGGGGAGGGGTTCCGGCGCGGTATGGCGAAACCCTTTTTTCGAGCGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCCGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCAAATATTCACTCCAGCTATTTTAAAACCCATAATCATCACCACAATCCTATTTGTATTTTAAATAAAATCAATACTCATTCACCCCACAACCATATTTCCTCATATATATTATTCACAAAAATAATACATTAAATATGTCAGAGGTTTTTTATCTCGATATTCCGACAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTAATCTCCGCTAACATACCTCGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTAGAGAAATGCCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCTTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAATGGGAACATCCGTGACGCAAATGGCGATGCGGGAGTTCGCGCGAGCG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 44363-44034 **** Predicted by CRISPRDetect 2.4 *** >NZ_VTSZ01000001.1 Enterobacter hormaechei strain ENT5 NODE_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 44362 28 100.0 32 ............................ TTAAGCCGGGCCGCTGAACGTTAAAAGACTTC 44302 28 100.0 32 ............................ TGCTGATTATTCAGCATTGAAAGAATGCTGCT 44242 28 100.0 32 ............................ TGATAACTCCGTAGATCTGATACTGACAGACC 44182 28 100.0 32 ............................ AGTACGAGCTGCCCGGGAAGATAGACGACCTC 44122 28 100.0 32 ............................ TTTCCCGCTATTCCTCAGCGATCCGTTGCGCC 44062 28 71.4 0 ......A....CA.....C.TA.GC... | C [44036] ========== ====== ====== ====== ============================ ================================ ================== 6 28 95.2 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : CAGGAACCTGCACAGACGGCGAGTTCACCCGTAAGCTGCGCTTCGGCACCGGCGGCAAAGGCGGCGACTTCTTCATGGCGGGTGGGCATCCACTCAATAGTTTTCATCTTGTTAAGGCTATCGCTGAGTCCGTTCAGAGAATCGCCAGTGACGCCCCAGATACGCTTTACGCCAGCCTGCTCAAGGGTTTTCGCTATGTATGCAGCCACAGTTTGTTTCATGGTTGTCCGTCTCCTTTATGTGATATCGCTTACAAGCTTAGAAGAAAGTCGCTGTATTGCCTGCTCAGTATTCCTTAAGTACAGGTGGTTTTTCTGCGCGACGCGCCGCCAGCGGGCTGAGGTTGGGGCGGGCGGAAGCGGGTTTGCAGACCCTTTTTTCCTGATGATGCATAAGTTATTGATTTTATATGGTTGGGCTGATGGGGAATAAAAAAGGGTCTGGAGGAAGTTTTTGAGGTATTGGTTTATCAGACAAAGGGATAGGTGTAGATTGTTTCA # Right flank : TGTAGGCCGGGTAAACGTAGTGCCACCCGGCAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGTGAACCGCGAAAGATTATGCAAGCACAAGATCGCCTTGCGGATGGCACGAACATGCCAGCACATAGCCCTCTGCGATTTCCGCGTCGGTTAGCGTCATGGTGCTGGTGACCGTGTACTCACCGGAAACCACTTTGGTCTTGCAACATCCGCACACCCCGGCGCGACAGGCCGCCGCCACCGGTACGTTGTTGCTTTCCAGCGCTTCAAGCAGCGTGGTGCCCACGCGCCCAAAGAAGGTCTGCGCCGGTTGCAGCTTCGTGAACTTCATCCCGCTGGTCGCCGCTTCCGCTACAGGCGTGAAGAACTGCTCTTTGAAGAAGCGGGTCACGCCGAGCGCTTTCACTTCTTTCTCCACGATCTCCATGTATGGCGCCGGGCCGCAGGTCATCACGGTGCGGTTCGCAATATCCGGCACGCTTTGCAGCAGCTC # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //