Array 1 2124520-2126512 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT618793.1 Propionibacterium freudenreichii isolate PFRJS-23 chromosome I, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 2124520 36 100.0 37 .................................... TCAGAAACAGGCATACCAGATGTTAATGCAAGGGCTG 2124593 36 100.0 36 .................................... GACAGGACCACAGGCACGGTCCTGGACCACAAGATC 2124665 36 100.0 37 .................................... CTCGTGAGGACCTCACTGACCAGCATCTGCCGCTGAG 2124738 36 100.0 38 .................................... GCCCCGAACCCGACACCCACGACCACCAGAACACCCAC 2124812 36 100.0 36 .................................... GTTGAGCAGGTGGCAGAATGTACATGCCACGAGACG 2124884 36 100.0 37 .................................... TATACAGCCTTCTTCGTAGGAACGTCAACACCTTCAG 2124957 36 100.0 36 .................................... GCGAAGGTCGGGCTGTTCAAGGACGACGGCGGCCCG 2125029 36 100.0 36 .................................... CCCACCCCTACACAACAGACGGCACGAGCCTCACAG 2125101 36 100.0 35 .................................... CATCCTGAATACATTCGGGCTTGAGGACCAACGGT 2125172 36 100.0 36 .................................... GGTGGCCGTTCCGATTGGTTTCCGCCGTTCGATAAG 2125244 36 100.0 36 .................................... ACGAAGACTGACCCACTCCAGGGACCGGCCCCCAAG 2125316 36 100.0 35 .................................... ACGACGATCCATAGTTCCCCAGAACCTCTCTAGCA 2125387 36 100.0 36 .................................... ACGTTCCGCACCCGGCGCGGGTATGACCACAACATT 2125459 36 100.0 39 .................................... CCGAAGCTCGCTCCTCTGATGAATGCCATCACTTCAGCG 2125534 36 100.0 36 .................................... GGGTCCGGTAACAGCGGGATCGGGCACCCTGCACCG 2125606 36 100.0 35 .................................... CGAACCGAGCTGCGCAACAAGCCCCATTTCTTTGA 2125677 36 100.0 38 .................................... GGGCAGGTGTGGGAAGACGACTGGGCAGAACTCGCTAA 2125751 36 100.0 35 .................................... CCGGCTCTTCAAGGCTGTCCGACCAGACGGGGCCG 2125822 36 100.0 36 .................................... CCCGACAAATTTCCTCGCAAGCGGGCCGCGCACGCG 2125894 36 100.0 35 .................................... TTCTCCTGAAATGCCGTTGTGGCATCAATAGTAGG 2125965 36 100.0 37 .................................... TGGGCTTCCTCCTGTGTGAGCTGAATTTGCTCGACAG 2126038 36 100.0 35 .................................... GGCGACAGTGCGCATGTGATCCGGTTCGGTCTTGA 2126109 36 100.0 36 .................................... TCAAAGGAGCATGCCCATGAACACCACGGTTGTCGA 2126181 36 100.0 40 .................................... GTGGGCGGCGAGGGCTTCCCAGCGGCGCAGGAGCCGGACC 2126257 36 100.0 38 .................................... GTGAGCTCGGGCTGAGCGTGAGCCAGACAGCGGCAAAG 2126331 36 97.2 36 .....T.............................. GCATTTGCTTGCCCATTTGCTTCCTCCAATCTGCGT 2126403 36 100.0 38 .................................... CGCACCAAGGCCCCGGCTCGGCGAGGGACGGTTGCCGT 2126477 36 94.4 0 ......T............A................ | ========== ====== ====== ====== ==================================== ======================================== ================== 28 36 99.7 37 ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC # Left flank : ATATAGGAATGACGGTCAGATGAGCCGACGAGATTCCCATTGCTTTCTGATCGCCTACGACGTGCCCGATGACCGTCGTCGCACCAGGTTGGCCACGGTACTGAAGGGCTACGGGGAGCGTGTGCAGTACAGCGTATTCATGGTTGATTGTCCGCCGTCACACCTGCTGGTGCTACGCCACGATCTCACCGACGCGATGGATATTGATGAGGACTCGGTGGTGATCTGCGACCTGGGCATGTCCACGTCGGCAGACGCCCAACGCATCACCTGGTTGGGCGGTCAGAGGTACCAGAGCGGCGGACGCAGCATCATCATCTGATGACCAGCGGCTCTGCGGCCCGGTTGTCACGCGGAGCCGCTCGCGTGATGTTTCCCCTTGTCACAAGCAGATTGCGCTGAAGGGGTCATCAATCCTCCACGCGCGAGCCATCCTTCTTCAGCACCGCTCGCAGGCGGCCGGTATAATGCCTAGTGGGAGCCCTGTTCCCACGCCCGCC # Right flank : CTTGCGCCAGCTCTCGGAGACGATGGCGCCTTGACGTGGCGTTGCCCCTCTCCCCGGGCGAAGCCCTCCACCCGTTCAACGTCCCGAAACTCACGGAACTCCCGCCGGCGCCGAGAGCTAGACTCGCCATGAGAAGGTGGGAGGTAGGGCAGACGCCCAGCTGACCCACCTTCCCTTTTTCGCACCCCCGGTGGCGCCAAGAGCCACCGATTCCGTCCAACCGCCCACCCTCTCGTCCACCCGCGCGAGGACCCGTCACCCCGATCAGCGCTCACTGACAAGGCCACGTGGCCGCGCACGAGCCCTAGGCGTTTCCGGACCTGACAGCCGCCATGACAAGGCGTTTTCGTCACGCACTGGCGATGCCGAGACGTGCCCCCACACAGCTCCCCCCGCTACGGTTAAATCCGGCGGGGCCGGCAAGGCATGCCCCCTTCATTGAGGCTGACGCCAATAGATGGGCATTTGCGACACCCGCCAAAGTCCCTCCTCACGGAGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.30,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //