Array 1 557080-560148 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZOQ010000001.1 Streptococcus sanguinis strain ST02 Ssanguinis_ST02_Nina_Sia_YES_0, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 557080 36 100.0 29 .................................... AAATTTTACAAAATTTATATTTACGCTGG 557145 36 100.0 30 .................................... AAGAACGGGAAAGAGCCTAACAATCCATCC 557211 36 100.0 30 .................................... TCTTGGTCGAGGTTGTCGCTACGGCAGCGG 557277 36 100.0 30 .................................... GCGCCAGCATGTTTTGACAAGGAGGAACCA 557343 36 100.0 30 .................................... AGAGTCGAAAAGCATAGCTTTTTAATTTCC 557409 36 100.0 30 .................................... GTGCTAGAGGTTTTACAGCTTTTGGTGCGT 557475 36 100.0 30 .................................... CTAGGGAAGCGTTGAGTATTCTGTCTGATA 557541 36 100.0 30 .................................... AATCCTCGGGCACATCAGAACGCAACTTAC 557607 36 100.0 30 .................................... TTTTCTTCTAAACTAAATTCAAGTTCTAAT 557673 36 100.0 30 .................................... AGAAAGGCCTCTTATAAGACTAAGAAAATG 557739 36 100.0 30 .................................... AGCGGTTCATTTTTAGGGGCATTGTTGTCA 557805 36 100.0 30 .................................... CTTTCAGGCGAGACACTTTTTCCGCAATGT 557871 36 100.0 30 .................................... ATACATTTTCAAATATTCTCGGTCAAATTC 557937 36 100.0 30 .................................... GTTTATCGCAGAGCCAAAAGCGTGTGATAT 558003 36 100.0 30 .................................... TTAAACGAGCCAAAATCTCGATCAAGGTAC 558069 36 100.0 30 .................................... AATTTTCAATATATGTCCATTTCCTTTCAT 558135 36 100.0 30 .................................... GTAATTCCCGCACGAACGATAAGAATCGTT 558201 36 100.0 30 .................................... GTTGGGAAGATATAGCAGACTATGTACCTT 558267 36 100.0 30 .................................... CCTTAGAATTATCCACCGATTACAATTTTA 558333 36 100.0 30 .................................... AAGTCCGCTTGTGGATCTGCCTTTAACCAT 558399 36 100.0 30 .................................... ATTATACACCAAGTTTACTTGTTTTGTTTA 558465 36 100.0 30 .................................... TTACTTACAAGTTAAGTATAACATATTACA 558531 36 100.0 30 .................................... TGGACTCTAGATAAAATGATGGCAAGTGCG 558597 36 100.0 30 .................................... CGATGCCAGACCTTACTGTACTCCGTTTCT 558663 36 100.0 30 .................................... CTTTAAACATTTAAAGATCAACGAAGAAGA 558729 36 100.0 30 .................................... ATGGATATTCGAACCTACCTCAATCAAGGT 558795 36 100.0 30 .................................... GCAAAAATGCTAGCCTATGCCGTGTTAATC 558861 36 100.0 30 .................................... CTAATCCGGAAATTAAAGTCCATGGATTTG 558927 36 100.0 30 .................................... TTGAGATGGATCATTTGAGAAATCTCCCTT 558993 36 100.0 30 .................................... GATGTTTAATGGAAAATAAGAAAAGATACA 559059 36 100.0 30 .................................... ATTGCCGTTGTAAGTTATAATTTATTTGAA 559125 36 100.0 30 .................................... AAATTCCTTCAAACTATGTCCGTGATTCTG 559191 36 100.0 30 .................................... ATAAGGATAAGGTTAAACATCTTTCTGAAG 559257 36 100.0 30 .................................... CAATAAGCATTGCTTTAAACTCAGCTTCTT 559323 36 100.0 30 .................................... AAATTAAACCAAAGGTTGATAATATTAATC 559389 36 100.0 30 .................................... GATTGGGATGTCGGCTAGGACTAGTTCCTT 559455 36 100.0 30 .................................... TTCGAATATGCAATTCTCTTGCCCTTTTCA 559521 36 100.0 30 .................................... GGTACATTTCTATGGCTGAGGGAGCTGCAG 559587 36 100.0 30 .................................... AAAAAACGTGGAGCGAGTTGGAACATGCCT 559653 36 100.0 29 .................................... TCTATCATCAGGATTTTCCGCATTAGCAC 559718 36 100.0 30 .................................... CTTCCATTCCAAGACGGAAACCGCCGATAC 559784 36 100.0 30 .................................... TCCAAATGTAAGCCAGTCATAGGCTGGAAG 559850 36 100.0 30 .................................... AAACAAACACACCTGAAACAGTTGCGCAAA 559916 36 100.0 30 .................................... TTTTGACGGTTTGCGTTTGTGTTGGTATGT 559982 36 100.0 30 .................................... TGAGAGTTATTTTGCCCTCTTGTCTCTGCT 560048 36 100.0 29 .................................... CTAATAACGTTCCCTTGACTGTGGGGCTG 560113 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 47 36 100.0 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : GGATAGTTATTTAAACTATAGTGAGTTTATAAATTGTTGTAAAAAGATGAATGAGATGACTATGGATTTACAAAATTTTCACGTTATTAACTTTCTATCAAGCGAGGGATATATTTATATAAATAAAGAAAACATAATGAATGTTAATATTGTTGCGGATTTAGTAGAACACTTTTACGAATTTTCATTTATGTATGAAAGATTTTTTGGTCAATATCCTGCTAATGAGGTACCGGATGAAAAGGTTTTTTTAGAGTCGTTACAAAAAGTTTCATCATATCTTTTTAGTAAGGATATTGCTCATATTAGTTTATCTATTCCAGATATAGTTACTTTGAAAATTATAAATCATTTGTACCAATACGATAAAAAGCCAAGAATTTGTTCTACGATGTCTAATCCGCTATTAATTAAGTTTTTGAATACCTATAATTGACAGGAATCGCAATAGGCATTATAATCAATATATGAGTATAAAAATCACAATTTTTCCATTTGAG # Right flank : CAGCTTACTATAGACCAGATAGCGTTGTTCTGTTTTTATTATAGTTTAGGATAGAGGGGAATCTGTAATGTTTTATCATAAAAAGGGCTGAGTAAATCAGTCCTTTTGTTCTCTATTTCCCCAAGCAGAATTGGCTGAAGAGTTGGGTGATGAGTTCGTCTGGTGCGGCGTCACCAGTGATTTCGCCGAGGATTTCCCAAGTGCGAGTCATATCGACTTGGAGAAGATCTACCGGCATACCCATTTCCAAGCCTTGGTTGACGGCTTGCAGGCTTTCTAGGGCTTTTTCAATTAAGGAGATATGGCGGGCGTTGGATAGGTAGGTGGCGTCTTGCTCGACGATACCAGCATTTTCAAAGAAGAGCTGATTGATGCGTTCTTCAATTTTATTGATATTTTGATTGTGGAGGACAGAAATCTTGATGACATCAGTTGGCAGCTGATCCAGCTCAATCTTTTCCTCAAGGTCAGTCTTGTTAAGCAGGACGATACGATTACTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //