Array 1 2061-1594 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LKFJ01000068.1 Lacticaseibacillus paracasei strain FAM18119 FAM18119_scaffold_0068, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      2060	    36	 100.0	    30	....................................	TCGCGATGTGGTTGGGGAACCTGGCTTCCT	
      1994	    36	 100.0	    30	....................................	CCGCCGAACGTTCACGCCCACATCACTCAA	
      1928	    36	 100.0	    30	....................................	AGAATTGCAAGAAATGGGATTAATGCAATA	
      1862	    36	 100.0	    30	....................................	ACGAGAAGAAGGAGCGGGAGGACAATGGCA	
      1796	    36	  97.2	    30	............C.......................	ATACATACATGCCATGACGATGCTCATTTT	
      1730	    36	  97.2	     0	.........G..........................	-                             	Deletion [1695]
      1694	    35	  75.0	    30	-CAAA.....AT....A.G.................	AGGAAATTCGAGTTCTTCCCGCAATTGATG	
      1629	    36	  83.3	     0	C......................C.....A..TTC.	|                             	
==========	======	======	======	====================================	==============================	==================
         8	    36	  94.1	    26	GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	                              	       

# Left flank :   ATTTTAATTTTGGCTAAATTCGAGGGTGAGGCCTATCAAATTCGCTATAAATTTACTACAAGGGTCGAAGATATGGTGGCCTAGTTCAACAGCCACTAAACTAGGGGAAAAGAAACTTGTCATTCTTACAAATGTCAGTCATTATTTAAGTGCTAGAGATTTCTTTGCGGTGACTGAACAGATCGGTGATACAGAACTTCAGGTCATTCTCATCGAGTTCTCAAAAGTGAACCGAAAGAAGTACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGATAGTCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACC
# Right flank :  AAACAGCAGTGATATTAATATTGAAGCTAAACTTGTCAAAAAGTGCCTCATTTTGTGACAAAATAAGATGTTTCACTATTTATTGTGTGAAACAAGCCTCAATATTTACAAAGCTGAACCTTTCAACGTTCAGCTTAAAAGCCGCCGTCTAAAGCAATATCGTAGTAACCACATACACTCATGCGGTGATATATCAATCAAAAACTAAGTGCTATCGACCTCCTCTTGTGATAGAATTCATTATATATGAAATCGTTTACACAACGAGGAGGAAGAACGACATGAAAAAACTAATAGTGCTCAGTGCCACACTTTTGGTCAGCATGGGGTTGGCCGCATGTAGTAGTGGATCGAGCTCTAGTTCGAGCAAGAGCAGCAGTAGTACGACCAGTCAGACGAGTAACGCTAAGGTGAAGATCAATACCGGCGCTGATGCGAGTGCCAAGGTGCCGGCAGCCGGTACCTTAGTGATGCGTCAGCTTTATGCTGCACCGCACGGC

# Questionable array : NO	 Score: 5.49
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:-0.44, 8:1, 9:0.98,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [16-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//