Array 1 119156-117935 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRUN01000007.1 Roseburia inulinivorans strain AF24-4 AF24-4.Scaf7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 119155 32 100.0 34 ................................ TCTTGAAGCGGCAGTAAGGTGTTGCATTGTCACA 119089 32 100.0 34 ................................ ATGGAGAACGTACCGCAAGTACATGCCGATGCAA 119023 32 100.0 33 ................................ AGTAATATCCATCTGCATATCTCTCAAATAATC 118958 32 100.0 36 ................................ GAACAGCAATTTCGCATTTGAAAACGACAGGCGAAG 118890 32 100.0 35 ................................ TCCGATCAGCTTAAGGCAATGGACGGACTGGAGAA 118823 32 100.0 37 ................................ AAAAACAGAAATTAACAAAATGAAACGTGAGGAGCTT 118754 32 100.0 33 ................................ CTAGAGGTTAACATTAATTAGTACAAGTCTATT 118689 32 100.0 34 ................................ TAAAAAATGTAAAAACTCTACCTTTGCCAGGAAG 118623 32 100.0 35 ................................ AACAGCAATTCCCACAACAGATCATGCCGCAACAA 118556 32 100.0 34 ................................ TGATTACCTCAAACGTAATTCCACCTCTTCGCTC 118490 32 100.0 32 ................................ TTCGGTAAAAAGAAAAAATGAGCAAATACAAA 118426 32 100.0 34 ................................ TGAACCGCTATTGCGCTGCAGCATCCACAAGGAA 118360 32 100.0 35 ................................ AAAAGGTGGATATATTATCCCGGAACCTGAACCGC 118293 32 100.0 34 ................................ ATGAAGCAAAGAGTATCAGCTTACGAGACAGCTG 118227 32 100.0 31 ................................ AGTATTCCTGCGCCACCGGAAGATTTATCTC 118164 32 100.0 34 ................................ TGCAATCTTTCCAAGTGCATACTGCGCCATTACA 118098 32 96.9 35 ..T............................. ACGACATAGCCTACACAAAGGCAAATGCCTACGAT 118031 32 100.0 33 ................................ AACTATTTCCATTTTGGATATATTTCAGTTTAA 117966 32 96.9 0 ......................A......... | ========== ====== ====== ====== ================================ ===================================== ================== 19 32 99.7 34 GTCGCTCCTCTTGTAGGAGCGTGGATTGAAAT # Left flank : ACATTGATGCATATCCGCCATTTTTGTGGAAATAGAGGTGATATTTTGCTTGTATTGATTACATATGATGTTAATACAGAAAATGAAGCAGGAAAGAGCAGACTTCGTAAAGTAGCAAAACAATGTGTAAACTATGGAGTACGAGTACAAAATTCTGTTTTTGAATGTATTGTAGATGGTGCCCAGTGTCGCATGCTGAAAGGAAAACTACAGGAAATTATAGACGAAGAAAAAGACAGCATTCGTATTTATTATTTAAACGATAAACAAAAACAGAAAATAGAATGTCTGGGTGTAAAAAAAGGAATATCAGTAGAAAATACGCTGATATTTTAAAGCGGTGCGGATCATAAGCGAACATGAAAAAGCGGATGATTCGCACCGGGAAATACAATATTTTTTGTGTTACATGAAATAATTATTGTAGTGTTGATGGGATTTTATAGATACTATGCAATAATTATTACAGATAAGTATAAGGATAATTGTGCATTTTTGCC # Right flank : ATTCCTAACGTGACAGGTGGGAAATTTCTTAGGTTGTTCATTAACATAATTTGATGTTCAAAAATATCTGCCAAATAAAGTCATTTATGTGATATCATGGATACTATAAAGAAATCCTATTTGATACTTTTTCATAGTTTTCAGTCAAATGAAGTAATTAATTAGAGGCGGTACATATTTGCAAATAAGAAAGACGAGCAAATAGCACAAAAATTTCATAAAAACACAATACAAAAAGGAGTCCCCATGCAATCATACAACGACCTACAATCACAATTAAAAACAATAGACCATAAAAGTTACCCATTATACAAATCCCTGCGCGGAAGTTACCAGTTCCCCAAATACATATTGTCAATTGACCATGTGCAGGGCGATCCGTTTGCGGCACCGTCGGATGTGAGGGTGACAGTGGATGCGAAGTCAGCCGGATTCCCGGCATTTGCGATGAAAGATAAGCTGACAAGAACCGCGTTGGCGGATGAGCTGCTTCGCAATTT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCTTGTAGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : NA // Array 2 129387-127773 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRUN01000007.1 Roseburia inulinivorans strain AF24-4 AF24-4.Scaf7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 129386 36 100.0 30 .................................... ATAATATTCTTGTTAATATTGCTGATTAAC 129320 36 100.0 30 .................................... TGAAAAATCTCATTTATGCAATAAACGTAT 129254 36 100.0 30 .................................... CTCCGGAGATTGAGAACTCACAGCAGAGAT 129188 36 100.0 30 .................................... TCGGAGAAGTCACTGGAACAGGCGGCGGCA 129122 36 100.0 30 .................................... AGAATGCGACGAGGAGCAGTCCCTTCCTCC 129056 36 100.0 29 .................................... TGGTATTCCAAATGCGTTATGTAGATAAA 128991 36 100.0 30 .................................... ATCAATGCACGCAGAGAAGCAGAGCGAACA 128925 36 100.0 30 .................................... TCAGAAAGTTGACGAAATTTTCTTGCCAGA 128859 36 100.0 30 .................................... AGCAAACTAAGGTGCGCTAACGGATAAATT 128793 36 100.0 29 .................................... TTAAGTGCATATTTACCAAGACAAATAGC 128728 36 100.0 30 .................................... GCAATATGGCTATTTGCATACCCATGTGTG 128662 36 100.0 30 .................................... TGCTGCATAGGTGTGTATTTTCTCATGTCA 128596 36 100.0 30 .................................... CTGGATTCAAAAAGCGCGATTGATGAACAC 128530 36 100.0 30 .................................... TTATGCGGTGGAAACGCAATGTTCTTAACT 128464 36 100.0 29 .................................... TGAAACAGTATCACAGCTGGACAAAGTGA 128399 36 100.0 30 .................................... AACCGCTGTTCGCCTACTTGAAAACTCCAT 128333 36 100.0 30 .................................... ACCCCGGAGAAGAAAGGGGATTAATGAAGA 128267 36 100.0 29 .................................... AGATAAGAAAATGAGTAGAACAGAGCTTT 128202 36 100.0 29 .................................... CGCTGAAAATCTGCTGTTACTCCGGTGTA 128137 36 100.0 30 .................................... CTGGATTCAAAAAGCGCGATTGATGAACAC 128071 36 100.0 30 .................................... AGTGGAGCAGATGGATAACATTGAAGATAC 128005 36 100.0 30 .................................... AATGACAATCTTATTACATCGCTGTAGCCA 127939 36 100.0 30 .................................... TCTTACTCTCTGTCTTGGCAAGTGTAGTCG 127873 36 100.0 29 .................................... TTCTTCTCGGCTTCTCGTACAACGGAGCA 127808 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 100.0 30 GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT # Left flank : CATTTATGCAAACTGGTAACAGATGTCAGATTTGATCTGGATGACTATGCAAGAGATGACTTTTTCAGGGCATACACAACGGATTTATCTCTTTTGATGGCGATGAAAGATTTTTCATTAAAGCAACATATCGTAGAAAATACGTTATTCGGAAACTCAAAAGGCGGTATATATGAATGTGCCATAGCAGATGCACTTTACAAGAAAGGATATCCGTTATATTTCTATAAAAATGAGACAACCAAGAGAAAAATTGATGTTATGATCCAAAAAGATGGTGTGGTAGTTCCGATTGAGGTTAAAAGTGGAAATACGCGGGCTAATTCCTTAAAATCTATTTTGAAAATGAATGCAGATATTCCTTATGGATACAAGTTTGTTGATGGTAATATAGGTGTAAGTGATGATGGTATCATTACATTACCGTTATATATGATCGCGTTTATTTAAAGTATTATTTTTTTAAAAATATTATCACTGAATTCCCATAATACATTGTA # Right flank : AGGGAACGGAAAACCCTGCATAATCCAAATGATTATGCAGGGTTTTAACTTTCAAAAAAAAAATAAAAAATGATTATAGTAGACGGAAAAAACACATTTTAAGAAAAAATCAAGAAATATGAAAAGCATTTTCCACTATATCCCTAAACAAAGCCGTACTTGCCTTACTCGGGCATACGGCTTTTCGCTTTATATCTATGCTACCTATTAAAAGGCCTTATTTTGATACTCGTTTTTAATAGCGGAAATGTTCTAAGCAATTCATTATTGAATATTTTCGATGTGTAACCATAGTTCTAACTTCTGTGGTTTAAATATTTAAATAGCAATTTTTTGTTGATTTAAATTAAAATGTACAAATTATTGGACAGTTAAAGTGCTATATCTTCAGTAATGAAAAATCAGCAGGGAAAACCCTGCTGAAGGAGAACAATATTCTCCATATTATATTTTCAATCCGCGTAGTAAAATACGACAATCTTTATTATAAATAATAACGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTAGTTCCCGGTTATTACTTGGTATGTTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.30,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //