Array 1 2019432-2022414 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046452.1 Corynebacterium sp. 1959 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 2019432 36 97.2 28 C................................... TGCTCCGGCAAAGGGTCTGCGACGTACC 2019496 36 100.0 28 .................................... TTTGAAGCCAGCGCCATTCCTCCTCGGC 2019560 36 100.0 28 .................................... AGATCGATGCACTACAGAAGACCTTCAT 2019624 36 97.2 28 .......................A............ TCGTTCCCGCGTTGCTTGCCGACAATAT 2019688 36 100.0 28 .................................... GACGCAGGCCAGAGGCGGTTAACGTGTT 2019752 36 100.0 28 .................................... GGCGCGCTGTTCCTGCAAGCGTTTGTTA 2019816 36 100.0 28 .................................... TCCCGCCCACCACTCGGCTTGATTTCCA 2019880 36 97.2 28 ....................C............... CGTCGGGGAATACATCATCGACTTCGAA 2019944 36 100.0 28 .................................... TCCGAAATCGTGCGGTCACCATGCCCAC 2020008 36 100.0 28 .................................... GCGGAAGCCGGGCGTGACGACGCGGAAA 2020072 36 100.0 28 .................................... GGCATGGGCAAAACCATCATCACGCTCA 2020136 36 100.0 28 .................................... CCGACGTATTCAATCCCCGCGACCTGTT 2020200 36 100.0 28 .................................... CACGCCGAGGCATGAAGCGTCGTGAGCG 2020264 36 100.0 28 .................................... CAGGCTTCGACAACGACACAAAGGCAGA 2020328 36 100.0 29 .................................... GCGGGGTGGGGCTTTGACTTGGCTGACCA 2020393 36 100.0 28 .................................... CTCTTCGGCCTGCTCGTTGACGCTGCGA 2020457 36 100.0 28 .................................... CGAACCCTAAACGGACTAGTTCACGCTG 2020521 36 100.0 28 .................................... CAGGAACCAGGGAAGGAACCCACCATGA 2020585 36 100.0 28 .................................... TCATGGAACCGGTCAACCTCTCGGAGAA 2020649 36 100.0 28 .................................... AGTACCGCAACATCGACCCGCTGAAGAT 2020713 36 100.0 28 .................................... TGCTGCACCCACACCCCACGGCCACAGG 2020777 36 100.0 28 .................................... TGTCGACGGGGCGGTTGTGGCGTGTGGG 2020841 36 100.0 28 .................................... AATACGTCTGGGGGTCACTCGCTGCCAA 2020905 36 100.0 28 .................................... TCTTGTTCCGCTTAGTACGCGCGTCGGA 2020969 36 100.0 28 .................................... GCACCCGAAAGGACAGTGGAAAATAAAT 2021033 36 100.0 28 .................................... GTGGGAGAGTGACAGGCATAACCGGGCT 2021097 36 100.0 29 .................................... TGGACGGGTTGGAATAGTTGTCAGTCCAG 2021162 36 100.0 28 .................................... AGGAACATAAGGGTCAGCACCGTCAAGG 2021226 36 100.0 28 .................................... GGTCTTGTTGTGGCGCTCCCATTGCTTG 2021290 36 100.0 28 .................................... GGGGGCACCTTATGGCCACGCGAATTTA 2021354 36 100.0 28 .................................... TGTGTCTTGGATGCGTTGTTGGCGCTCT 2021418 36 100.0 28 .................................... TGCTGCCATATGCCCCCTATGTTCCATG 2021482 36 100.0 28 .................................... GCGAAAAGCCTACCGAGATGGAGTACTA 2021546 36 100.0 28 .................................... TTGTCCGACCTGTCACCGACGAGCGAGA 2021610 36 100.0 28 .................................... GATGGCACGCGTACCCATGAGCTGGCTT 2021674 36 100.0 28 .................................... ACCACATAATCCGCGATCAGTTGCTGAC 2021738 36 100.0 28 .................................... ACAGCATTAACTACCCACTCGGCCTTAT 2021802 36 100.0 28 .................................... TTGCGGGTCACCAGGCCACCACAACTCA 2021866 36 100.0 28 .................................... TCCGATCCCGAATGAAATCATCCGTGAC 2021930 36 100.0 28 .................................... CAGGTGGTGATGCGGGCGTCGTCTTTCA 2021994 36 100.0 29 .................................... CAACAAGTCCAGACACCCCGAGTTGATCA 2022059 36 100.0 28 .................................... AACTCGAGCCCGTACGCATGACCGCGAC 2022123 36 100.0 28 .................................... CTAGTTGGCGCGATAAGGCATCGCGTAA 2022187 36 100.0 28 .................................... TGAGCGGGGCGATCCGTGAACGGAAGTT 2022251 36 100.0 28 .................................... ACAACGGATGACTTCATCTTGTCGAAAG 2022315 36 100.0 28 .................................... CGACCGACAAGCACGAAACCTACGAGCC 2022379 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 47 36 99.8 28 GCTGGGGTTCAACTCTCAAAACCCCTGATAGACTTC # Left flank : CCAGGGCCTCGCCTATGGCAAAAAGGAGATGTCCTCGTTCGCCAAGGACGGGCAGCCGATCCCATACCTGTCTTTTAGGAACTCAGAGCCAGGAGCATCGATGAAGATGTTCCTGGATATGATGCTGGGCTTGCCGATCCGTTACCGCGAAACATACTCCACCATCCCCGCACGCGCCGACAACACTGCCGAGGCCCGCATCCCGATTGAGAACTTCCAAGGCAACGGGCTGGTCTTCGCAGGCGATCAGGACGCCATGTGGCAGGGCGAGGTGGCAGCGCGTGGGCTCGCCGAGCGTAACCCACGACTAGAAGCTCACGTCTACCCCGACGCTGGCCACATGTTCTCCGAGGACATCACCGAATTCGGACGAAGCTGGGAGAAGATGTTCGGCGGGACTGTGGAAGGCAACCGCGCAGCCAAACAAGACTCGGAGCGGGTGCTGATGGACAAACTCGCCACCTGGCACCGCTGAGCAATTAACGCGTCACCTGGTCCAG # Right flank : CAGCATGCCCCAAAACGGGCATGCAAGCTGGCATTTCTCTACTTTCTCACGCTAGAAAATCATCAACTGTGCAGGCATTTCCTCCTGCTCGGTCGGTGCCGCATTAGAAAATCGAATCGCTTTCGCCCATTGATTGTCTGTCAAAGTAACAATGCGAATGTCTCCGCCTTCAGGCAAGCAAGATTTCACGGTCTTAACGACACTTGAGAGTCTTGACGCCATGGGAAGATATTGCACATAGACACTAAACTGCGCCATTGAAAATCCTTGATCTAGCAATGCATTCCGAAATACTGTTGCCGCTTTCCGCTGGGGATTCGTCTTTACTGGCAAATCAAACATCACAAGACACCACATTGGCTGATCCTCATCCGTTCGCTTACCCATTAGATACTCCAGTGAGTTACTTCAAATCTCTGCCGATTTCCTTCGACGTATAGCCCGAATTCCTGTGCTAGCTCGATCAAACTTGTTGGGATTGACTCTCCCGTTTTCTTAAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGGGGTTCAACTCTCAAAACCCCTGATAGACTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.05 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //