Array 1 108620-107859 **** Predicted by CRISPRDetect 2.4 *** >NZ_AKYX01000034.1 Klebsiella sp. 10982 contig_10982_34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 108619 29 100.0 32 ............................. CGCATCCACATTCTATCCGCTGAAGGAGCTGA 108558 29 100.0 32 ............................. CTGCAGCCCAAATCGCTGTTTTTCGGCGGGCA 108497 29 100.0 32 ............................. TATCTGGCGACCTGCCGCACCGAAGAGGGGCG 108436 29 100.0 32 ............................. GTGGTGCATCCAGAACGGTAGCCAATTCTGTG 108375 29 100.0 32 ............................. GATGTTGGTCACGGTGTTAGCCCTCTTTACGT 108314 29 100.0 32 ............................. TGGGGGTAACTGGTGTCAGGCTGGGGGCGCGG 108253 29 100.0 32 ............................. TATATATGGGCATGAAATAGTTGCAGGAAATA 108192 29 100.0 32 ............................. GTCAGGCGTGAGTAAAGGATTTTCCTCGCCTC 108131 29 96.6 32 ................T............ TGGAAAGACATTAAGAGAGGGGGAATTAAAGA 108070 29 100.0 32 ............................. CGCCTGGGGGGATCGCGGTGAGTGATTCATTT 108009 29 100.0 32 ............................. GAGGGCGCGGAGGGTAACGTCTACGTGCTGCG 107948 29 100.0 32 ............................. GCGGTTGCCCTGATGGTATGGCGGCTGTGTAG 107887 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 13 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGTTGTCGGCAGGCGAAATCGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATCCCTGAGCCTGAATCAATGGGGGATAGCGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTCCCTCCTCGTCTGCGGGGGCGGCTCGCCATCTGGCTGCTGGAGGTTCGAGCGGGAGTCTACGTTGGCGATACCTCAAAGCGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGTGAATCAGGTTTCGAGTTCCAAACTTGGGGTGAGAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTTCTTCCCATTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAAATTGTTGGAATAAAGTTGGTGGATTGTTGTCGCCTCAAAAAGGCATTAAAAAACAGTAATATATGTTTAGT # Right flank : GGGTTCACTTGGGTGAAACTGAACCAACTGTGCCCGCATTCGCTGGGATAAGCCCGTCACTAATGTTATCGATCCTGAGGGTGGGTACGAAAGCTTGCGGAAAATAAGTGTTGCTACCTGCCGCTCTTTAGCAGAATGCCCCCTTAATTAGCCGATATCACTGCTTTTTCACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGTATGGGGCGCCGTATTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGTCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATCATCTTCAGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 190232-190807 **** Predicted by CRISPRDetect 2.4 *** >NZ_AKYX01000019.1 Klebsiella sp. 10982 contig_10982_19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 190232 28 100.0 33 ............................ TGGGTTTTCGTTCGAGTTTAGCGCCTGCAGGCG 190293 28 100.0 33 ............................ CCAGTCGCCAGGAACAAACTGTTCAACGGTTAC 190354 28 100.0 34 ............................ TTATTATCTGCCGGTCGAATCCTCATATTTAGAG 190416 28 100.0 33 ............................ TACATCTGGCGCGAGAATAAGAAAGGCAACCCC 190477 28 100.0 33 ............................ TTGCTCTTGCCACAGCCGCGCCACGTTTATTTT 190538 28 100.0 33 ............................ TCGAATGGGAAAACCTGTTCGCTTTTTTATCAG 190599 28 100.0 33 ............................ TGGGATTCAGCCTGGGTTCTCTCTTGATGTGAG 190660 28 96.4 33 ..........T................. TCATGTAACTTTCAGTGCGCACCTTCTTTCATG 190721 27 92.9 33 .............A...-.......... TCTCGTGATGGTCTATGACGTCGCCGTCGGTGG 190781 27 82.1 0 ............C.T..-....C.A... | ========== ====== ====== ====== ============================ ================================== ================== 10 28 97.1 33 GTCTTCCCCACATGCGTGGGGGTGTTTC # Left flank : GTCAGCGTCGGCCAACCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGTCTGGACGGCGCAGCGCAGGATAACAGTCTCCAGCTCCCGCTGCTGACCAGCATGTATCTTGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGTGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGCGGTAACTGCGCGAAGCCACGGAAGGCAAGCGCCAGGATGACGCGCTACGTTCCGGGAATGACAAAAGTGTTTTGCGCCTGGCTGCGGCCCGGGGAGGCGAGTAGGGTAGACCGGTCCTGGTCAGCAGCAAGTCAACGGTGGTGAGATGGGGACTTACTTTTTCGTTTGATGAATGTGATGCTGATGCGGAACCCCTGCGGAGTGCAATTATCGTAAATCTGGTGTTTTAATACGCCGCTAAACACAATATGCTGGT # Right flank : CAACAAAGCTGGTCAACCGTTGTTATCGTTATCTTGGTTTAGTTTGGCAAACACAGTTTAATATATTTTTCATGTGAATTTAAAATTCATATTCATGTGTTATATTTATTTTTTATTTCGCAATGGTTGTTAAGTCCATTTTTCTGGCGCACCTGAAGTATGATTATTCATACTACTTATTTATAATGTCTGATATTGTCGATTTGATGTCTCACATTAAGCGCAGCGTTTGTGAGTGCTTTTTATTTTATAAAAAATTATTTATAAAGCTTCCTGACTTTAGTATTAATAAAACGCACATGTTTTATTAAGGATGATTTTCATGAGGCGCTTAACCAGGGTTTCGCTACAAAATCAACATGCCATCGCGGCGATAAGTTTTGAAAACTGCCCGGCGAAAACCCGGATGTTGAGTGATGGTCGCGTGGTGCAGGGACGCTCGGTATTGAGTCATTGTCAGATTGTCGGGGAGATTGCCCGGGCGCTTATAGCGCTGTATC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACATGCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 199470-200229 **** Predicted by CRISPRDetect 2.4 *** >NZ_AKYX01000019.1 Klebsiella sp. 10982 contig_10982_19, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 199470 28 100.0 33 ............................ CGCGACATGGCCGCCTCTCTGGGAATTTCGGTC 199531 28 100.0 33 ............................ CGGGTGAACTCCCCCCGCAGGTGGAGGTGTTTG 199592 28 100.0 33 ............................ CTCCCCCCGCAGGTGGAGGTGTTTGGGCAGCTT 199653 28 100.0 33 ............................ TTTGCTGGTCCGCAGCGCGGTCGCGGTTGGGGG 199714 28 100.0 33 ............................ TAGATAACGACCCGGACGACTTCCGGCGGCGGC 199775 28 100.0 33 ............................ CAGATCCCACCAGATTTCCCGCAGCTCACTAAG 199836 28 100.0 33 ............................ TGTGGATTCATATGCTTTAGCAGGATATGCGCA 199897 28 100.0 33 ............................ CATCAGCAGAGAACCCGAGCGTAGACAGGCATT 199958 28 100.0 33 ............................ TATTGTTCGCGGCAAGTGTCATACGACCTGGTA 200019 28 100.0 33 ............................ TCATCCTTAACGGGTCGATGATTGAGCCTGTGA 200080 28 100.0 33 ............................ CTCGCGCGCCGCTGCGGGCTGATCACGGCCAGC 200141 28 100.0 33 ............................ CAAAGAGGGGATCTGTTACGAGCTGCGCGACTA 200202 28 71.4 0 ........T.....T......C.TAGCA | ========== ====== ====== ====== ============================ ================================= ================== 13 28 97.8 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TATATAAAGAACGACTCTGTATCGATCTGGCTTTTTCGCTGTCGAGGGAGATGGCGGGTCGATATGATAAACATAAAGTTTCTGAGGCATTCAGAAAACGAGTGATAGCCCTGGATTTGCTCAACCTTATTGCCGCCGATATCAATGAGCTAATGGGAGGAAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTCCGTGGACGAATGAAGCTGTGGTTTGTCGAACCCCGGCCAAATGTGTTCGTCTCAGGCGTCAAAGATTCGGTTGCACAAACCGTTGTTGATTATCTGATGCAGTACACGCCTGTGGAATCGGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGTTATGAAATTCGCTACAAGGGTGAGGTCAGAAAGCCGATTATTGAACTCAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGGATATTGTGGTTAAATTCTCGCTCTTTCACAATATGTTGGT # Right flank : AATAAGCGGAATACTCGTATTAGAATAAATATTTTATAGCCAGCGAAACTTAAAATGATTTTTAGCTAATGAAACTGTCGTTTGGGAGAGGTAGGAGTATTTTATTGCGATAGAGAAGGGAACTGTTTAAAGCAATAACCGCGAATGATTCTTATAAAATGAAGGATAGGGAATTCATATGTTTCGGCTTTACCAGTCACATGATTTAATACGCCAGTTAAAACCTGAAGACTTTCAATATATTTTGACACCAGCAGGTTCGCTAAGAGAAGTGTGTATACATTACGACCTCTCCTGTGAGGCGAATGGTCACAGCCTCGCTTTTGGCCTACCGAAGGAAATATACAATTCATCTCCACATAAAAGGCCATATGAACGAAGGCAACGTAGCTATGCAGATCCTATCTACGATGAGGTAGAGCACAGGCTACAAATTGGCTGGCTTGTTGGTCTGGATATCTCCAGGTGTTGGAGCAGTGACAGAAATCCATTTTACATCG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //