Array 1 33893-34525 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB893950.1 Actinobacillus capsulatus DSM 19761 C228DRAFT_scaffold00021.21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 33893 32 100.0 35 ................................ TTAATGAGAAAGTTGGAGCATCAACGATAGGAGGT 33960 32 100.0 36 ................................ TTTACGAGTTCTTCGGTCATTACCCATATATGTTGT 34028 32 100.0 35 ................................ CATTATGACACCCAATAACGAAGATAAGACGCTGG 34095 32 100.0 34 ................................ ATATTATCCACATAATTGCAGGTTATGTCAAATA 34161 32 100.0 34 ................................ GTATCGAGCGAAACCGCTACGGGCTTATCCTCTC 34227 32 100.0 34 ................................ CTGAAATCACACTCGCATTTTGGCGAATATCATC 34293 32 100.0 35 ................................ ATCGATCTATTACCGAGATGTTTCCTACATATCAA 34360 32 100.0 34 ................................ TGAAGGTGGGTTAGTTGGTGGATCATTTGCTGCT 34426 32 100.0 34 ................................ TTCCGTCATGTATCGGTCTCTCGCATAAGACGAC 34492 32 87.5 0 ......................T....T.T.T | T,C [34513,34518] ========== ====== ====== ====== ================================ ==================================== ================== 10 32 98.8 35 GCAGCCACCCACGCGTGGCTGTGTATTGAAAC # Left flank : TGAGGAATTGGCAACCATGCTGATGTTGATTACCTACGATATTTCATTTGATGACCCCGAAGGGCAGGCTCGCCTACGCCGTATTGCTAAGCATTGTTTGGATTATGGTGTGCGGGCTCAGTATTCTGTGTTTGAGTGCGATGTTACACCCGACCAGTGGGTAATACTGAAAAATAAATTATTGGCAACTTACAACCCTGATTGTGATAGTTTGCGTTTTTACCATTTAGGCAGTAAATGGCGGAATAAAGTCGAACATCACGGTGCAAAACCTGCAGTGGATATTTTTAAAGATACGTTAATTTTATAAATCGCTAACCTGTAGTTCTCATAAAAATGCTGGGAGGTTAGCGAATATACATTGTTCTTTAATAATCAAGGAATTAGAAAAAATAAGGTACAGTATATTGGCGATATGCTATACTTTTTCCACTCTCTAAAAAACGTTAGCGAATAAAGGGAAATAAAGCCTGATATCTCAATACGTTATCTTTTAGGGG # Right flank : TTTTGCATTGTTTGTTTTATTGGCGATTTTCATTTTGAGCTAAAACTCGCCACTTATTTGATCTTGTTTTTTGTTTTCTTACTTCGTCAATGTTAAACTTTAATGAATATGATTTAACGACTTAGAGAAAGATAACAATGAGCGGTGCAGAATTATTAGTGAACGTGACGCCGAGTGAGACTCGGGTAGCGTTAGTTGAGAATGGATTGTTAAAAGAGCTTCATATTGAGCGTGAGGCGAAGCGAGGGATTGTCGGTAATATTTATAAAGGGCGGGTGACACGAGTTCTGCCGGGGATGCAGTCGGCATTTGTGGATATCGGCTTGGAAAAAGCAGCATTTTTACACGCTTCCGATATTGTTTCTCACACGGAATGTGTCGATGAAAATGAGAAGAAACAGTTTATCGTAAAAGATATTGCAGAGCTGGTGCGTGAAGGGCAGGATATTATCGTACAAGTGGTGAAAGACCCAATTAGTACCAAAGGTGCGCGTTTAACT # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCCACCCACGCGTGGCTGTGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.50,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA // Array 1 11936-11372 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB893937.1 Actinobacillus capsulatus DSM 19761 C228DRAFT_scaffold00008.8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 11935 36 100.0 30 .................................... ATTCAACCGCTTGTAAAATCAACAAATTAT 11869 36 100.0 30 .................................... TTTCCTTGCCACCATTCACTCCGAAAGCCA 11803 36 100.0 30 .................................... GGTGGTGGCTTAGAGTACGAACTTATCTCA 11737 36 100.0 30 .................................... TCCAAAGCGCTAAATCTGTTGTAGCGATAA 11671 36 100.0 30 .................................... CGGAAAAAGAGGGGGGTTTAAAGGGGTTTA 11605 36 100.0 30 .................................... TTCAAGCTGCTTTATCTGTTCTTCGTAACT 11539 36 100.0 30 .................................... TGGCAACCATTGTGTACCAAATTTCTTAAT 11473 36 100.0 30 .................................... CATCATAATTGAGCCGTCACCGGTGACTAA 11407 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 100.0 30 GTTGTAGCTCCCTTTTTCATTTCGCAGTGCTATAAT # Left flank : CATTTGCCCAGCAGCGAAAACGATAATGCACATGGGCTTCATTCTCATCAATATCCCAAGCTTGATTATCTGGATTGTCTTCATTAATTGATAACATCCATTTACACTGTGATTCACTGAATCCGGCTGGCAACGGGATAGTCGCGCCATGCTCTAAAACCCCCATTAATACAGCAACCTCTTTTTTATTGAAATTTTGGCTCACCCAATTTTCGTAAGCTACAATTTGATTCATTCCTCTTTTTCTAAAAAACGCCGAATGTTCTTCTTGATTGCCATTATTTGAGCGATAGCTAATTTTTGAAAAATTATCTTCGTTATCGGGTAATGTCTCCGTTCTTGTTTGCTTGCCTGCACTATTCCACTGATTAATTAAACTGTAGTCGCCATTTTTAATATCAAGCACACCGGTTAACGTATCGCCAGTTTTAGACAGACGACCATTCGCGTTATCATTAACTGTTTTAACCGCCTTTGATGTCGCATACTTATTGCTGTCA # Right flank : TCGGAGCGCTAAAAAGCCTTGAACCATAAGGGTTCAAGGCTTTTTTCTTACTAAAAAAATCGCGTTAAAAGAGTAAAAGTTGGTTCGAATTAACCTTTTTTTCTTGCAGTTTTTTCTCGCCGACAAGGATTTCCATATTGGCAAATTGTTTTTCCGTAATGGAAATACAACGAATTGAGCCTTCTTCAGGCAAGTGTTCCACCAACCGTTTATGGTGTTTTTCCATCGAATCTCGCCCACGTACAATGCGGGTATAAATCGAAAGTTGCAACATTTGGTAGCCATCTTTCAGTAAAAACTGCCGAAATTGGTTTGCTGCTCGCATCTTAGCTTTGGTGGTAACTGGTAAATCAAATAACACAATCATTCGCATAAATACATTCTCACTCATATTGATGCTCCACAAGCGGTAGAATTTCAGGCAGTTTTAGCAAACCGGTATTGCGTTGGCTTAATGCCGTTTGAAATGAGCCAACACTTCGCTCAATCGCCGTTAAAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTTTCATTTCGCAGTGCTATAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTTTCATTTCGCAGTGCTATAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //