Array 1 436131-428612 **** Predicted by CRISPRDetect 2.4 *** >NZ_DS264459.1 Bifidobacterium adolescentis L2-32 Scfld0239, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 436130 33 100.0 34 ................................. ACACACGACAATCTATAAAGGTAGGAAAGTATGG 436063 33 100.0 33 ................................. ATGGGCCGTATCGAGACCGTGGATCGCCTGCCA 435997 33 100.0 33 ................................. CTTTGCTTACCGTCCGCTACTTTTCCAGTGCGC 435931 33 100.0 33 ................................. CCCTACACCACTGAGGGACTGTATGCGGCAATT 435865 33 100.0 34 ................................. AATGTTGACCTTGATGATTTCCGCTATCTCCTCG 435798 33 100.0 33 ................................. CGCTGGGTGTACCGAAATGACGTCGGCGGTTAC 435732 33 100.0 35 ................................. ATCTGAAAGGACTGCAACCATGTCACGGAAGAGGA 435664 33 100.0 33 ................................. TGCAAATGGCTAACGTGCTGAGCGACGAAGCGT 435598 33 100.0 34 ................................. GGTTACAAGCCGGTTATCAAAAGCGCTGGCATAG 435531 33 100.0 34 ................................. GTTCGTTGACGAATGGGGGGAACTGAAACAGAAG 435464 33 100.0 34 ................................. ATCCTTGGTGAGATTATTCTTGAGTTCCATTATT 435397 33 100.0 34 ................................. CATACGAAGCGTTGCATTACCTCGTCTTTAGGGG 435330 33 100.0 32 ................................. ACGTCATCAATCACTATCAGCCTCCGGCACGA 435265 33 100.0 38 ................................. CAGTATAGCAGAGGGAACGGTGAAACGTCAGCGGTCAG 435194 33 100.0 34 ................................. TTCGATGCGTTTCGCGGTGCGTTTTGCCGCGGTG 435127 33 100.0 33 ................................. TCCGATTGCGGGGAGACGAGACGGAGCCGTTTA 435061 33 100.0 33 ................................. TGCCTGTCCGGCTGGCCGTCGTATCGCGCTATG 434995 33 100.0 32 ................................. CCCAAGCCGAAACCTCGTTCTCATCGCCTTCG 434930 33 100.0 35 ................................. GAGTTCGGTCGTTGTGGCATGCCGCCAGTCCACGG 434862 33 100.0 33 ................................. ACGTTTGGTATTTTCTCCCTCGTCATTGCTCAC 434796 33 100.0 35 ................................. ATCGAACGGTGCATCCGCTTGTGGAGCAATAAGGG 434728 33 100.0 32 ................................. CGAACTGCTTGCGGAGTGAGGTGTTCGCAATG 434663 33 100.0 34 ................................. TTCACGCCCGGAATCATCCGCCATGATTCAACAC 434596 33 100.0 34 ................................. ATCCTTACCTGTGGTGAATTGGAGTGTGTGGAGT 434529 33 100.0 33 ................................. ATGAAGGAGGACGCGAAATGAATAAACGGTACA 434463 33 100.0 32 ................................. ACGAAGAACATCGGCTACTTGGAAACCGACAA 434398 33 100.0 32 ................................. ACGAAGAACATCGGCTACTTGGAAACCGACAA 434333 33 100.0 32 ................................. ACGAAGAACATCGGCTACTTGGAAACCGACAA 434268 33 100.0 34 ................................. GATGTGGAAGGGTATTTCCTCCTGGCCGTCTGCG 434201 33 100.0 34 ................................. ACACCCGATGTGATCGCATCGTGGAAGGCGCTGC 434134 33 100.0 33 ................................. TACCAGTCTCTTGGTGATGCGTACAAGGCGATG 434068 33 100.0 33 ................................. TCATCGACAAAACCGGAGAACGTCAGATAATCG 434002 33 100.0 34 ................................. TCGTTCGACGGCGGCGACGCGACCACGCATAATT 433935 33 100.0 33 ................................. TGGTCTGAGGCGAAACAGCCGGTCATCGACATG 433869 33 100.0 34 ................................. TTTGAAGGATGTCATCAAGATGGCACAGGAGGTT 433802 33 100.0 34 ................................. AACTCAAGCAGCGAACCGGCCGTAATCTTGGCGT 433735 33 100.0 34 ................................. CGCGCCCAAACCGCACATGTCACGCAATCCACGA 433668 33 100.0 34 ................................. GGCTACGCTAGTGAATACGAACAAATAACACGAC 433601 33 100.0 34 ................................. CAGCAGTCAACGTCAACGGCATCCATTTGAGCAG 433534 33 100.0 34 ................................. TTCTTCTTTCTTATCGGGTACGGGTACGGGTACG 433467 33 100.0 34 ................................. CTTCTTCGTTGGTTCCATAGTTTTTGCATTGGAA 433400 33 100.0 35 ................................. AAACCATTCCAACCATCTGCGGTTTCACCCCCCCG 433332 33 100.0 34 ................................. AACTCGCGCTCTGGTAGGACAGTTAGACCCCCGC 433265 33 100.0 35 ................................. AACCCATCTGGAGGTAATTGCGACTGCTCCAGTCT 433197 33 100.0 34 ................................. CGGTAGACACGTCGTCGATTGGCATCACCAGCAA 433130 33 100.0 35 ................................. ATATCCAGCTTCGGTAGCTCAGTGGCAGAGCGTAA 433062 33 100.0 35 ................................. CAGACGATTACGCTAGCCTTTTCTGGTGGACTCAC 432994 33 100.0 34 ................................. CAGTAGAATTTTGGTATCACCGGTGTATACGCGT 432927 33 100.0 33 ................................. ATGGAATCGGTGAAGCCCGGTGTCGCCATGATT 432861 33 100.0 34 ................................. TACGACAAGTCGAACAATCGCACCATCCATTTGA 432794 33 100.0 33 ................................. TGGACTGGCGAAGGCTCCACCGATACCATCGTT 432728 33 100.0 33 ................................. AATTGCGTCGTGTTGGCGTTGATGTAGTCGCAT 432662 33 100.0 35 ................................. CGCAAGGACATGGGAACCGACCCGGCGACCGGACG 432594 33 100.0 34 ................................. CACGTCTCGCTCTCCATCGCCCGACGGCACGCCT 432527 33 100.0 34 ................................. ATCATGGGCTATCGCGGCATGATCGACCTGGCGC 432460 33 100.0 33 ................................. AACATCACGTCCACTACCGCCGCCAACAAGATC 432394 33 100.0 33 ................................. AGCAAGAGCCAACGCATCGGATGGTCCTTCACG 432328 33 100.0 32 ................................. AACCATAAGGCCATTCGTGATCGGATGGCCTT 432263 33 100.0 34 ................................. TCGGAGCACCAGCGGAGCCAGAGCGAGATGACGC 432196 33 100.0 34 ................................. ACCTGGACGATGCAGATTCTCCCGCAGCACCAGC 432129 33 100.0 33 ................................. ATCAAGGAGTCAGGCGACATGATCTCGGACCTC 432063 33 100.0 34 ................................. ACGAAGAATATCGTTGATCTTTGCCCCTTGAGCG 431996 33 100.0 36 ................................. AGCACTAGGATGAACGCCTTTCTTTGCTTCGCTGAG 431927 33 100.0 33 ................................. TTTTTGCGCCGTCCTGTCAAGTCTTTTTATTTT 431861 33 100.0 34 ................................. TATATCCCCAACTACAATGAGGCAGGGGCGGACA 431794 33 100.0 34 ................................. ATCAAGCCTGAGCCACGCCATAAGCATCAAGCGA 431727 33 100.0 34 ................................. ATGGATGAAGAGGAAGAATCCCAGCACATGCGAA 431660 33 100.0 33 ................................. CTCTTGACTTTTGGCGTTCCAATAGAACGCGGG 431594 33 100.0 35 ................................. TCGTACGCGGTTATGGCGCTTTCCCGTGCCTGTAT G [431578] 431525 33 100.0 35 ................................. GTCAAGACCGCAGCGCAGGATACCGTCGTTGTCAA 431457 33 100.0 33 ................................. CAGAACGGAGCCATTCCCTGCCAGTCGGCATGC 431391 33 100.0 33 ................................. ATGCAGTTGGTGTCCGACATGGTCGGCGGCCTG 431325 33 100.0 33 ................................. ATGCAGTTGGTGTCCGACATGGTCGGCGGCCTG 431259 33 100.0 35 ................................. GGTTCCGTCGCCGCCCGCGGCAAGCTCCAGGGCGA 431191 33 100.0 34 ................................. ACCGTCACCGACGAAAGCGCCGACCACAAGACCA 431124 33 100.0 33 ................................. CAGAACGGAGCCATTCCCTGCCAGTCGGCATGC 431058 33 100.0 33 ................................. ACGAACTGTACGATGGCAAAATACGGACTGCCG 430992 33 100.0 35 ................................. CTTTGATGGTGGCTGGCGTGGTGGTTCCAGAGGCG 430924 33 100.0 34 ................................. CATGTTGCGGGCGTGGCCTTCTGGATGTTCAGGC 430857 33 100.0 33 ................................. ATCGAACCCCCGACCGTGGAATGGCCGTCATGA 430791 33 100.0 33 ................................. ATCGACACGGCCAAGTCCAGCGTCGGCGTGAAT 430725 33 100.0 33 ................................. TCCATGGCCAGTCCGGCGTCGAGGATGCGCTGC 430659 33 100.0 35 ................................. GCCGAGCATGGCGACATGATTCGCCCGCAATACGC 430591 33 100.0 35 ................................. TCGCATACCTGCGAATCAACCTCCCCAAGTCGCGG 430523 33 100.0 37 ................................. TGCTTATTGCGTCATGTGCGGCTGCATTTCCCGAAAC 430453 33 100.0 33 ................................. AGCGCCGACCTGACCAAGGCGCAGCTGAACCCG 430387 33 100.0 33 ................................. GTGCTTCCCGGCCACACTCCCCCGGAACCCGAA 430321 33 100.0 34 ................................. ATCGTGAGTTTCCCGCGACTCCACGCTCTCAATG 430254 33 100.0 34 ................................. TCCAAGCCTGCCGCATATCCGAATGACGGTGGCC 430187 33 100.0 34 ................................. TCCGACCTGGCCGCGGACGATCAGGGAGGATACG 430120 33 100.0 34 ................................. TTGCGCCATAGCTGACGAAAAGCTGCTTCCACGC 430053 33 100.0 34 ................................. GGTTTGACCGGCTACGCGATTCGCGTCACGGGCA 429986 33 100.0 35 ................................. CTGCCGCAGCGTGACGAGCTGGTCACGCAGGATAT 429918 33 100.0 34 ................................. TAAGGACGAATCATGAGTATCACCATAGAGAATC 429851 33 100.0 33 ................................. CACAAGTCTCGCCTATAACTTAGGACACTAGAG 429785 33 100.0 34 ................................. ATCTGAGTTGCGCTTGGCATGCGCCTCTGATATT 429718 33 100.0 35 ................................. AATAATAGTTTCGCCATTTGCCGACGCTCTCCGGT 429650 33 100.0 34 ................................. GTCGGCATGGCGAACTTCGCCGGCCAATTGCAGA 429583 33 100.0 34 ................................. ATTTTGTGGCCTCCAGATATGGGTTTTCGCTTGT 429516 33 100.0 32 ................................. CTTTTCGAGGGCGTCAAGTCGTGCGGAAACGT 429451 33 100.0 33 ................................. CGCGTTCCATCGAAATTTTTTCGCAAAAGGTTT 429385 33 100.0 34 ................................. ATCGACACCCACCGGGCCGAGATCAACGACATGA 429318 33 100.0 34 ................................. ATCGAGGTTTGAGCAACAGACGAACTCTGCTGTT 429251 33 100.0 35 ................................. GGCTACATCATCCCGAGCTGGCGTGATCCGCTCAA 429183 33 100.0 36 ................................. TTGATGGTGATCTCACCGAGCTTGCCGGTGGTGCCG 429114 33 100.0 33 ................................. TCACAGCTCAAGGCGCATACCCGGTCGGCTCGA 429048 33 100.0 33 ................................. ATCGTAATTATCGGAATTGCGCGGGGTTTCCAT 428982 33 100.0 34 ................................. TAGGTGTAACAGTGTATGCAGTGGTTTTTGGAGT 428915 33 97.0 35 ........T........................ GAGTTTGGGAAGCTCGTATCTGACGGCCTCGCTAT 428847 33 97.0 35 ....................T............ AACGGGGTAGTACTGAAATACTGCATGGCGCGGTG 428779 33 100.0 35 ................................. ATCGCCATGCAATCATCCGACTACCTCGCGGTCGG 428711 33 97.0 34 ......T.......................... ATCGACCATAATCAGTCTCCTTACCAGTAGAGGG 428644 33 97.0 0 .....................A........... | ========== ====== ====== ====== ================================= ====================================== ================== 113 33 99.9 34 GTCGCTCTCCTTACGGAGAGCGTGGATTGAAAT # Left flank : TGATGAGGACAGTCTGCGCTTTTATAAACTTGGCTCTCGATATGCGGATAGGATTGAGCGTTATGGGCGTGAACGGAGTTTGCCGGTTAATGATGTGATGATGATATAGCACAGGGTAAAATGGCATGGTGTCATAACGATATGGTGTGGGGTATGCCGGGTTGAGTGTTTGAGTGTGACGTGTGACGTCCGGCATCTGGAGCGTGTTCTCTAGCCGGCGGTATTGTGGTTTCGGCAAGGTGGCCGGTCTTGAAATGGTGTTTGTGCGAAGTGGAAGCGCTCATGATGAGGGGTGCCTTTCGCACCTGAAAAACTGTCGAAATCCGAATTGTGATTTTCGTGGGCGTTTGAAAACTAAATAGTGGACATTAAAATGAGACAGAAAGACAGCTGCTCGTTTTAGGCATGTTGTTCGTCGTACCGGTGGTGTTGTTTGATATGCTTAAAGCCAAGCAGCTGGCTTGCGTCTCAGAAAGTGGACAAAAATGTCCAGCTGCACG # Right flank : CGACCGGAGCGGGTGCGCGGCGGCGCTCTGGTGTGTTTCTGCAAGTTGGCATCCACAGTATAGGCACTATTTTTCAGCAGCATAGGCAGCTGGTCTCCAACAGAAACTGCGACGTCGGAATCCGCCACCCTTTTCTTCCTAGCTATCTGGTCATGAGGGCGTGCTCGCTACGGTAGGAGCCTCCCTCGAATCTGACGAGCCTTCCGTGGTGCACGGTGCGGTCGATCAACGCGGCGGCCATGTTCTTGTCGCCGAGCACGCGCCCCCAGCCGGAGAACTCGATGTTCATGATATGGGCCATGCTCCGGGTCTCGTAGGAATCCGATATGACCTGGAACAGGAACCTGGAGCCCTCCTTGTCGATCGGCATGTAGCCGAACTCGTCGATGATCAGGAGCCTCGCCCTGGCGATCTGCCGGAGCTCCGTGTCGAGCCGGTCTTCCCGTTTCGCGCGGCGCAGCATCATAAGCAGCCCGGTCGCGGTGAAGAACCTGACAGGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCTTACGGAGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.10,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //