Array 1 1170719-1173008 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056361.1 Citrobacter sp. RHBSTW-00667 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1170719 29 96.6 32 ............................T TTCATTCCATCCTCCGATATTAACCACGTGCG 1170780 29 100.0 32 ............................. GCTTTCACCTAAATTTGCTGTTCAGGTTTCAA 1170841 29 100.0 32 ............................. CGGGCAATTTGCGTTTCAGGGAACTGGCTCTT 1170902 29 100.0 32 ............................. TCTGCTCTCTCCATCGCCGTCATTGAGGCGAC 1170963 29 100.0 32 ............................. ACAGAGGGAGGCCGCTGTCGGGTGCGGTTCGT 1171024 29 100.0 32 ............................. CTGGCCAATCTGGAAAAATTGCGCGATGCCGT 1171085 29 100.0 32 ............................. CTGAGGTCTGCGCTCGCTGATGAGGTGGAAGA 1171146 29 100.0 32 ............................. ATATTCAGAAACTCGGTGAGCGTCTTGGTTTG 1171207 29 100.0 32 ............................. CCTGTCATTCGTTTTGATGGAAATATGCTTCA 1171268 29 100.0 32 ............................. CAAACCGACGAAAAAATCACGCATACCGTCAT 1171329 29 100.0 32 ............................. TGCATCTGGAAGCTGGCAAAGTAGTTACAAAG 1171390 29 100.0 32 ............................. ACGAGCATACGGAGGTGGTTTGGGTACATGAA 1171451 29 100.0 32 ............................. GCGTAACCCCAGCTTCTCTAGCATCTGCTGAG 1171512 29 100.0 33 ............................. ACCGCTGGCACTGGCTGGAGGCTCGCCATTGGG 1171574 29 100.0 32 ............................. CCATCAACCCTGATTTCAATACGCACGACGAT 1171635 29 100.0 32 ............................. TAAAGTACCAATAGTACATATTTAAGATAAAA 1171696 29 100.0 32 ............................. ATTACCAAAGGCAGCCTGAACGGGTTTCGCGT 1171757 29 100.0 32 ............................. AAACCAGACCCGGCGTTGGATAAGCCTCTGCC 1171818 29 100.0 32 ............................. ACAGCCAGATCAGTGGCGTCTTTATGATCTCG 1171879 29 100.0 32 ............................. CGAACAATTTGAACATAACGAGAACCCCGCCA 1171940 29 100.0 32 ............................. GCGGCGCAGCGGCTGCGGCCATCACGCCACGC 1172001 29 100.0 32 ............................. CCGGGTAAAACCATAGGAAAAATCGGGTATGC 1172062 29 100.0 32 ............................. TTTCGTGGAATTGAGATATAGCGACTGACCGA 1172123 29 100.0 32 ............................. AACGAGGGGGCAATTGAGCCGGACGTTGACGG 1172184 29 100.0 32 ............................. ATATTGAGGACTCGATATCGATTGCGATGATG 1172245 29 100.0 32 ............................. TTGCCCGACCAGGCTTTCACTGACGTGCTCAA 1172306 29 100.0 32 ............................. GCATACGGCAGGATTTACGAAATTACTATCAA 1172367 29 100.0 33 ............................. GGTATTCTTTGTCTGAGTAACTGCCTTTTCTAA 1172429 29 100.0 32 ............................. ATCCTAAACAACAGCTCGCCTATTTGGCCGTA 1172490 29 100.0 32 ............................. ATATCGCCGCAGCACTCACGCAGTTTGCCACC 1172551 29 100.0 32 ............................. CAGGGATAGTCAGCAGCGTTCGCGGTCCCGGC 1172612 29 100.0 32 ............................. GTTTGAATAGTGCATTCATTATTTGCGGGAAC 1172673 29 100.0 32 ............................. AGCGGGGTCGGAGTTACTTTTTGTTTTCGCGT 1172734 29 100.0 34 ............................. ATCGAATATAGACAGTAAGCTAAATTATGCAAGT 1172797 29 100.0 32 ............................. GTGCGCGGCCCCATTTAGCAGGGCGTTTTGCG 1172858 29 100.0 32 ............................. CGCATAGCCGAGCTGGAGGCGCGGACGGTGAA 1172919 29 100.0 32 ............................. TCTCTGGCCGCGTTTAAATACTCAGTCGAGAA 1172980 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================== ================== 38 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATTCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCTTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCTGCGTTGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGTGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //