Array 1 14507-13746 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKXB01000139.1 Streptomyces sp. CC53 NODE_260_length_43075_cov_118.419846, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 14506 28 100.0 33 ............................ GGCCGGCGAGGTCTCCGGGTCGACGGGCGTCGC 14445 28 100.0 33 ............................ TCGCGCCGAGCACTTCGGCGGCAGTCTCCTGGA 14384 28 100.0 33 ............................ GAGGCGCGGGCGGTTCCAGTAGACCGCCTTGAT 14323 28 100.0 33 ............................ GCGGGGGTCCGAGGTGTCGAAGTCGCGGAGGCA 14262 28 100.0 33 ............................ CCTGTTCACGCTCAGGGTGCCGACGCTGTGCAC 14201 28 100.0 33 ............................ CGGCAGCGTGAAGAGGCCGTAGTCCCTGCCGCC 14140 28 100.0 33 ............................ CTGGTGTTGCGGCGGCCGGTCCACGAGTCGACG 14079 28 100.0 33 ............................ GTGCAGCGCCCTGTACGAGCCCTCCTGCTGGGA 14018 28 100.0 33 ............................ GGCGAATGGCGCGGCCTCCTCATCGCCTCCATG 13957 28 100.0 33 ............................ GTCGTTCTGCTCGTCGGTGAGCTTCACGGCGCT 13896 28 100.0 33 ............................ GTGGGCATATCAGGCACATCATCTGTTTCTGGG 13835 28 92.9 33 ............G........A...... CTGGCTGATGCAGCCCGTGCGGGACGCGATCGC 13774 28 89.3 0 ..T....................A...G | C [13748] ========== ====== ====== ====== ============================ ================================= ================== 13 28 98.6 33 GTCGTCCCCGCACCCGCGGGGGTTGTCC # Left flank : ATCCGCCGGCAATCGCCCCCACGTCAACCCCGCAGCCCTGACCGGAGCCGCCTCCACCTCATCCACAGCCTGAAAAGCCGGACACGCCTTCCCACAGTCATGAATCCCGCAGATCCACATGAGCCACAACCGCCCGCGCCCACCGCTGACATCCTCCAGCCGACGCCGCAACGCAGCGGACACGTACCGGTCCCACATCACCTCCGCCACGGCGGCGGTGTCCAGCAAGTGCCCGAGCAGCAGGTGCGTGCGCCCCCCGTTACGCGCCGCGGACTTCCCCCATAACCGCGACGCCCTGACGATGGTCTCCTCCGACCAGCCCATCGCCCGCATCAGGTCGACGATCGACCGCATGTGCTCCACCGGCGCAGCCTCCCTCGTACAGTGGACCCGCACCATAGGCCCACCCACTGACAACGCCCCTGAACCTCATGCCACAGCTCCCGACGCTCCTCAATGAAAAACACCCCACCTGCTAGCATCCGCGCAGGTCAAGAAGT # Right flank : GAGCGGGAGAGAGTCGTCGTCACGCCTGCCTCGTCGTCCTCCGGGAGTAGAGCCGAGCTGTGCGAGAGTCCGCGGTCACAGCCGTGGGAGCCCTCTGGGGTTCCCTGCCGCGGCAAGGGGCGTGACCCCGTCGGTCGAGACGCCGACGTCCACGGCCCTCACTCGCGCAGGCAGGCGCCGTCGCCGGTGCGGGCGGAGCCGTACCGGCCAGTGCGGTCCGGCCCGCCCCGGCTCCCCACCGCGGGGAACCCGCGATGGGACTGCGGGCCTCTGCGTTCGCGGGGGTCCGCAACACGGCTACTGTGAAAGGGTGTTGGCCCGCACGGAGGCGGCACGGTCCGTACGGAATCAGCCGCATCAACCTCCGTTTCCCGGGCATCATCCGTGCGTGGAGGACACGCGCATGCGGACCCGCGGTGCGGGACGCCCGTCCGCCGTCCGCAGGCCGGCCGCCGTAGCGGTGGCGCGGCGCCGTGTCCGCCCGAGTCGTCGTCCGCGGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACCCGCGGGGGTTGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCACCCGCGGGGGTAGTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 24885-25339 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKXB01000139.1 Streptomyces sp. CC53 NODE_260_length_43075_cov_118.419846, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 24885 28 100.0 33 ............................ CTCTTCGCTCACCGGGCAGGGCGACTGACCTGC 24946 28 100.0 33 ............................ TTGGGGAGGGGGCCCGTCTTCTCCTTCCAGAAC 25007 28 100.0 33 ............................ GCCGTGTGGGCCAAGAGCGACATGTCCAACGGG 25068 28 100.0 33 ............................ GCTCGTCGGCACGGTGGCGCCGCCCGCGCCGGA 25129 28 100.0 33 ............................ CCGACGGCTACCGGGGAGAGCACCACGCACCAC 25190 28 100.0 33 ............................ TCGGTATCCCCCGCATCCGAACCCTCACCGGCG 25251 28 100.0 33 ............................ CTCCCGCCCCGGCATGAGTGCGGACAGGCGTGT 25312 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 8 28 100.0 33 GTCGTCCCCGCACCCGCGGGGGTAGTCC # Left flank : GAAGAAGACCTGGCCGGACTGTGGGACGAGGAGGAAGGCATCGTCAGCGGAGGCCGCAACTGGGGATCGGACCCCTTCGACCCCGGCAGCCACTTGAACGTCATCCCGGACACGGACGGGAGCGCCCCTTCATGAGTGCCGCGACGACGATCGTGGTCCTCATCGCCTCCCCTCCGGGCCTGCGAGGCCACTTGACCCGCTGGTTCATCGAAGTCGCCCCGGGTGTCTTCGTCGGAAGCCCCAGCGCACGCATCCGCGACGGGCTGTGGAAGGTCCTTGCCGAACGCATCCACGACGGACAGGCAGTAATGATCGAACCTGCCCGGACTGAACAAGGATGGACCGTCCGCACTGCCGGTCAAGACCGCTGGACTCCGACCGACTTCGATGGACTCACCCTCATGTCCAGACCCAGGGGGAGCGCTGGACGCCCATGGGCCCCGGCGAACCTAGTGAAGGAAAACGGCATGACCACGTAGCAAAACCCAAGGTGAGCAAGC # Right flank : CCAGGGGTACATTGCCGAGGTCTCCGGCGGCCCGGGCGTCCCCGCACCGGCGCGAAGGCGAACAGGTCAGGAAGTGGCTCGTGGGAGCCCGTCACAGGCCCAAAGTCCCAGAGAAATCCCACGGATACCGCCGCGCCCCGACTGAGAAAGTGTTGGGTAATTGATCAACTGCAGGGCGTGGTCGGCTGGTGGTGATCGTTGCGGGCTGGTGTTCCGGGACGATCACCGCCATGTGTGTCTGCGTGTGCAAGCCTTCCTATGACTCGTCGTTGACGGATGCTCAGTGGGCGGTGATCGAGCCGCTGCTGCCGGTGCGAGACCCCCGCCGGGCGGGCCGCCGGCTGGAGTTTCCGCGTCGGATGGTCGTGGACACCGTGTTGTATGTGCTGGTCAGCGGGTGTGCGTGGCGGCTGGTGCCGCACGATCTGGCCCCGTGGGACGTGGCCTACCGGTGGTTCAGGGCGTGGACGGCGGACGGCACCTGGGACCGGGTCCACGAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACCCGCGGGGGTAGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCACCCGCGGGGGTAGTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [45.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 136269-136768 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKXB01000144.1 Streptomyces sp. CC53 NODE_272_length_183139_cov_115.107796, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================ ================== 136269 29 100.0 32 ............................. GACCGTGCCGTGCCCGCCCGCGAGGCGTCGTG 136330 29 100.0 32 ............................. CGGGCGCCCACCTCCGCCAGCAGCCCCTCCAG 136391 29 96.6 32 ............................T CCATCTGGGATGTGGATGTTGAGAATCGAAAA 136452 29 100.0 32 ............................. CCGCGGAACGCCTGCTCGCGGGGCAGTCGATC 136513 29 100.0 32 ............................. GCCGCGGACCGGCTCGCCGCCCGAATGCTGAA 136574 29 100.0 32 ............................. ACCGCCGCCCACCGCCTCACGAAGTGGGTGCC 136635 29 100.0 76 ............................. GCCGCGCACTGACCTGGGCGCTGCACGGGTAGAGGGAGCGCCGCCCCCTCCCTGGGAGGGGAGGGGGCGGTTCAGC 136740 28 75.9 0 .......G.-..A...G...CC.A..... | C [136742] ========== ====== ====== ====== ============================= ============================================================================ ================== 8 29 96.6 38 GTGGTCCCCGCGCGAGCGGGGGTGTTCCG # Left flank : ACTGAGGCATGATCTTCCCCAGGTCATGCAATCCAGCCCAGAACATCACTGTCTTCCGAGCATCCTCGATGCTCAACCCGAGCGCTACGGCAACACGTTCACGCTGGGTCGGGCTCATACACCGGTCCCAGACGGCCCCGCAGACCTGGGCGGTGTCAACCAGGTGTCCGATCACCGCATACGGCTCGGCCAGCCCCTCGGACTTGCCGCCTAACCGTGCATCGACCACAACGCTACCTCCACGAAGTTCCGTCGGCGGAAGTCCACCACACACCACTGACAGCAGCCCTCCCTCCTCAACTCCCGCAGTCAGGCTGACGCCCCCGGAGCCCTGCCCCCACCGACCGCTCTACGAGATCCGCCCGGCAAAAGACCCCAGGGGCACACCCCGACTTCCCGGCGCAAGTCCGTCACCCGTCTGCCAGGATGGACACATGCCTCACCAGATGCCCACCGGTAAAGAAGCTGCAAAGACCTCCTGAACGCCCAGCTCAGGAAGA # Right flank : GTCAGTGAACCGACGCGCTCATGGATCGGCCGCAGGAGGCGCGCAGCCCGATTCGTCTGATATTGATCCTGCGGCGGATGGCTGCCGATCGCAAATTTGCCTGCCCAGGCAAAGACACGTCACCCATGATCACCCCAGCGTGGGGTAGGTGCCATCCGCTCCTCCCTGGACCCTCGCGCGCCGCCAGGTCATCGGCCAGCGCATCCGCCGCGCGCGCCTCGACGCGAGCCTCACGCAGATGCGCCTCGCGGACCTCTGCGGCGTCGACCACCGAACGATCCACCGGATCGAGTACGGCGTCAGCGACCCGCGGCTGGGCCTCCTCCTCCAGATCTCCCAGGCCGTCGGCGTGCCCCTCGCGGATCTGGTGCGGTAAGGGCCCCGGCCGGGGCGGTTCGGGGGTGCCGGTTACACCGGGGGGCGGCCCGGTGTCGGCTGCGGGGGCGGGCTCGGCAGGGGCGGCCCCGGGTTCGGGGGCGTCTGCGGCGCGCCCGGGCTGC # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:-0.46, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGAGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 139772-140409 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKXB01000144.1 Streptomyces sp. CC53 NODE_272_length_183139_cov_115.107796, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 139772 29 100.0 32 ............................. ATGCTGTTGTCGAGGTGGGTGGTCTGCCACGT 139833 29 100.0 32 ............................. CCGTTGCGGAGGCCGGTGTCGGTGGCGGCCTT 139894 29 100.0 32 ............................. TGGATTTTGGTTGAGCGAGCCCGGATGCGCGG 139955 29 100.0 32 ............................. GACCCTACCCGCATTCAGCCCGGTGACCGTAT 140016 29 100.0 32 ............................. ATGACCGACTCCGCGGACGCGCCGATGGCGGG 140077 28 96.6 32 .....................-....... CGGGGCGACACCGCGGGCGACGACCTGCCGTG 140137 29 100.0 32 ............................. ACCCTCGTGCAGAACGCGCTGCGCGCCCTGCA 140198 29 93.1 32 ........T............A....... GTGAACCCGGGGGGGATCGGGGAGAGCGAGGC 140259 29 100.0 32 ............................. GGGTCCGGCTTCCCTCGCTGCCACTCGCGGTG 140320 29 96.6 32 T............................ GAGGGGCGCCCGTGACGAGTCTGTGGCGGGCC 140381 29 96.6 0 ..............G.............. | ========== ====== ====== ====== ============================= ================================ ================== 11 29 98.4 32 GTGGTCCCCGCGCGAGCGGGGGTGTTCCG # Left flank : CGGACGCGGAGCAGCGGGCCTAGTCGATGCTGAGGATGATCGGCTTATCGTCCGCGCTGAGGCCGTGCCGGGCGCGGATGGCTGCCTGGATGTCGGGGATGGCGGGCGCGTGCCGGACCGGGCTGCCGTTGAGGCGGAGTCCGGACGGTGCGGGGTCGGCGAGGTCGTATGTCTCGGTGCGGGTGTCCAGGTCGCTGGGCTCGTAGTCGTCGGGCCCGGTCCCGGCGGGGAGCAGCTGGTAGCGGATCTGGTACCGGGTCATGGTGTCCCCCTGGGCAGTGTGGCGCCTCCGGGTGTCGGGACCCGGAGGCGATGCGGACAGCGTAACGCGGGGCACTGTCAGGGGGGTACGGCGCAGCCCGCGGGCATGACGAAACCGCCCCCTGCCCTCCCCGCGAAGGGGAGAGCAGGGGGCGGGGGCGAGTTGGGAGAAGGCGCTAGCGGTCGAGGACCCCACGGAGCACGAAGATGACGACGCAGACGCCAGACGCGAGGATGGC # Right flank : GGAGCCGTCCGCAGCGTACGACGCGCTTACTATACTCCGGGCGCCGAGGCAGGGACGACCGGCCGGCGGCTCCGGGGGACGCTCGGGGAGCTCCGTGCGGTGGGCCGGTCTCCCCCGCTCCCCCGACAGACCCGTCGATCGTGCCGCGCCCCTTGCTGCCGACCTCCTACGTGAAGTGAGCATAGTAACCGAGGGTGATCACCTGTGAGCGATATTCGAGACGCTGGGCCCGGGGCGCGACGAGGGCCGGGAGGTGGAGGTGCGGGTTGCCGACGGCACCAGGCTGACCGTCGCCGTGCTGGTCGGCGCCGATAGACGCCGAACTCCTCGACGCCACACCGGCCCCCAGTCCGTTCTTCGGACGGACCGCGGCACGGCGCGCGTCGACGAACTCGCGGACACCCTGGGGCGCCGCCACTCCCTGGGGCGCCGACCCCCTGCTCGGGCGTCCGGCCCGGTCTGCCGGAAGGCTCTTGACCGCGCCGACGGGAGCCGCCCCC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGAGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //