Array 1 130699-129546 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARZR010000001.1 Listeria booriae strain FSL L7-0058 NODE_1_length_398964_cov_31.719111, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 130698 30 100.0 37 .............................. AACTTTGAAGGCGGCGAAATTGGCTGCTTTTTTTATT 130631 30 100.0 35 .............................. TTCACTTCCAACGCAACAATAGCAACATCACCTGT 130566 30 100.0 34 .............................. ATCCATAAAAGCTTTTGCTAGTTGCTGATTTTCA 130502 30 100.0 37 .............................. ACAGTGAACATTCCTCCATCTGACCAGCTTTCTTCGT 130435 30 100.0 35 .............................. ATCTGCCGATGCTTACAAAGTTGATTTACGTCTAT 130370 30 100.0 36 .............................. CGTTTTGCCTCGCGCCTCCAAAAAACCTTCAAACTG 130304 30 100.0 36 .............................. TATTTTATTTTGTTTGAGTTTTGGGGCATCATCCAT 130238 30 100.0 36 .............................. TCATATTAGCTTCAGGTATTAGTCCTAGTGATTTGT 130172 30 100.0 37 .............................. TTATGATTTTGAACGACGTAAATATTTGATTACTTTC 130105 30 100.0 37 .............................. TTTCCCGTTTCAATCCCTAATTGTCGAGCTTCAAACG 130038 30 100.0 35 .............................. GAATGCGCAGGTAGTGGCGTCTCCTTGTCCTCCAT 129973 30 100.0 36 .............................. GAAGATGTTACAGCTCAATTTGTTGAGGAAGAGGTG 129907 30 100.0 37 .............................. CCGCATCTTTGGCTAAACTGTTCACCTCATAGCCTTT 129840 30 100.0 36 .............................. TTGAAAATTATGAGGCATTTAATGTTCACACTACAG 129774 30 100.0 37 .............................. ATCGATGCGGATGGCATTTTAGAAGCAAACAATAACC 129707 30 100.0 37 .............................. AAAAAATACACAGAGGATCATGCAGCTATGCAGCATG 129640 30 100.0 36 .............................. GTGCTTGGATCGATTATTACCTCTTGCCGATTATGA 129574 29 86.7 0 .................A....-.C..G.. | ========== ====== ====== ====== ============================== ===================================== ================== 18 30 99.3 36 GTTTTTATCTAAGTAATGTGAAATGTAAAT # Left flank : AGGCAAATGGGCTGGTATGTGTGGCGAAATGGCCGGCGATCAAACAGCTGTACCATTGTTGCTAGGAATGGGCCTAGATGAGTTCTCTATGAGCGCATCAAGCATTCTAAAATCACGTTCATTAATCAAACGCCTAGATCGCACAGAAATGGCGAAACTAGCGGACGAAGCACTACAACAAGCTACAGAAGAAGAAGTTGTAGCGTTAGTTAATAAATATACAGCGGAATAATTTCGTTGTTCGGAAGGCCCGAGGATTTTCCTCGGGTTTTTCTTTGTGGGTAAAAGCGGGAATAAGAATCCTAAAAATCTGTCGACCGTCGGTAGCGTGGAAATTAGGGGGCATCGACAGATTTTTGTTAAGCGTTGGTGTCACCAGATTTGAGACCGTTTTTGGAGGTTGGGTTGTAAGGTTCGGGAGCGGAAATTTAGGATTTGGTTGTCGGTCGACAGATTTGGGTGTTTGAGGTATGATGGGAGTAGGCGTTGATGGAGCACCT # Right flank : TAGATTGCCCACAGATGCAGTGTTTCTATCCATTTTTTACAGAAGCAATTATCATTTAACAGCTTCCAACCAACTCCATTTGCATTTTTACTCCCCCAGATGTACACTTTGTTTAGAAGCGAACTGTATAGAAGGAGGAGTTTTTGCGATGACGAAAATTGGATTTATTGGTGTTGGAGTTATGGGTGCTAGTATGGTGCGGAATTTGATGGCGGCGGGGTTTGAGGTACATATTTATACGCGGACGAAAAGTAAGGCGGAAAGCGTGATTCAAGAGGGGGCGATCTGGCATGAGACACCGCAGGATTTGGCACCTCAGGTCGATGTGCTTATCACGATGGTTGGATATCCGACTGATGTGGAGGAGCTTTACTTGGCGGAGGACGGGCTGTTGACTACGCTTCGTTCGGGAGCTATTGCTATTGATATGACGACTTCTTCTCCGAATCTTGCGAAACAAATTGCCGAAGAGGGCAAGGCGCTGAACATTGCGGTGCTGG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTAAGTAATGTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 240977-240288 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARZR010000003.1 Listeria booriae strain FSL L7-0058 NODE_3_length_370717_cov_30.703907, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 240976 30 100.0 35 .............................. TTTTTTATTGCAAAAAATTCTATTAATCTTCACCC 240911 30 100.0 36 .............................. TACCACTTTTTCACGACCTAGTACTTCGATAGATTG 240845 30 100.0 36 .............................. ATTCAGCGTCAACCTTAAACGTTTTTTCAACGAGGT 240779 30 100.0 36 .............................. ACACGAGAAATATTGGCGTCAAAACGGAAGGAAAGT 240713 30 100.0 35 .............................. TTGCATCCCCATTGCCGCTCAACTATTGCAGTTGA 240648 30 96.7 36 ........................T..... AACTTACAGTCTGGTGCTACTAGCTTCCAAGGTGGT 240582 30 100.0 36 .............................. CAGGCAGGCACCTGCGCCCTCGCGCATCCCTAATAA 240516 30 96.7 37 .............................G AGGGGGGCTTACTCATTAGGGTTCGCTTTCGGTACCT 240449 30 96.7 36 .................A............ GCCGTTATTGTGGAACCAGCTTTCATTGATTCAGAT 240383 30 96.7 36 .................A............ AAGGACAAAGGCCAAACGGTACACTTTACAAACCCG 240317 30 76.7 0 A......C.C.....C.A.....CA..... | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 96.7 36 GTTTTTATCTAAGTAATGTGAAATGTAAAT # Left flank : AAGATTTGGTGGTGAGGTATGTATATTATCTTGATTTACGACATAGCAATGGATAATGGCGGCCCGAAAGTATCGAGAAACATTTTCAAAATCTGCAAAAAATATTTAACCCACGTGCAAAAATCGGTATTCGAAGGCGAAATCACACCAGCACTACTTGCTAAATTGCGAATGGAATTAGACCAGTATATTCGTGACGAAGAAGATTCCGTCATTGTGTTTTCTAGCAGAAATGAAAGATGGCTGGAAAAAGAGTTTTGGGGCGTTGCGGATGAGAAAACTTCGAATTTCTTTTAGTAGGTAGAAAAATCTGTCGACCTCCAGTAGTGCAAAATAATGGGGGCATCGACAGATTTTTGTTAAGCATTGGTGTGATTGGGTTCAAGGCTGTTTTTGAAGTTCGGCTTGTAAGGTTTGAGAGCGAGAATTCAGGATTTGGTTGTCGGTCGACAGATTTGGGTGTTTGAGGTATGATGGGAGTAGGCGTTGATGGGGTACCT # Right flank : CAATCTGTTTAGCTACGATTGCTTGGCAGACAATCTCTGTCTACCAAGCAATGTTCGTAGTCAGTATACGCTACTTTCTAGCTCTCACAAAAAATCCTCACGATAATCCTTAACATACTGATCAAACGAAGTAGCCTCACGGTGCAGCAATTCCTGTGCTGTTGGGGTTATTTGTTTTGCGTTTCCCATTTGGGTAATGAAGTAAAGCATGGTCATGACGTTGGCGAATGCTTTTGGGGTTCCCCGTTTTATTATGGTTGCGCGAAATCGTAATAGGGACGGCTTGCTGTATGTTATTTTCCTCCCTAGAATGGCTGTCATCTTCTCTGCCACTTCATAATACGTCAATGCTTCTTTTCCGGTAATACTATACTTTTGTCCGATATGTTGGGGTGTATTCATCAGGCAAATAGCAGCGATTTCCCCAATATCACGCGTATCAATAAAGCTCGTCCGCGCATTGCCCGCAGGAATGAATAAATCATCATGTTTCTGAATAT # Questionable array : NO Score: 3.10 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTAAGTAATGTGAAATGTAAAT # Alternate repeat : GTTTTTATCTAAGTAATATGAAATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 360532-360765 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARZR010000003.1 Listeria booriae strain FSL L7-0058 NODE_3_length_370717_cov_30.703907, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 360532 36 97.2 30 ..........................C......... TTAGTATAAAGGAGGCGCAAGACTATGACA 360598 36 100.0 30 .................................... AAGGCGCATTAGATAAATTGAATACCGCTA 360664 36 100.0 30 .................................... ATATGGATGAATTTTTGATTCATGCGGTCC 360730 36 88.9 0 ...........................T.T...TA. | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 96.5 30 GTTTTAGTCCTCTTCTGTTTTGAGGTACTCTAAATC # Left flank : ACTGTACAGATATCCCCATATCAAATATCTCCGAAAAATCATCAACACTTGGCAGTTTCTTTGTACTAATAATTTCTTTGCCTTGAAGTGTGATAGGTAACGCTTTGCTACCATCTTTCTTCAATAAACGCATAACCTCATCATTTTTGAGAAACGGTTCTAGCGAGTCTTCCAAGTAAAAAGCATCAAGAACTATTTGCTCCTCCTTTACGAAGAGATAACTTTCTTGGAACTCCTTGTCAAAAATAGAATTGAATAGCTCTAGCTCTACTTCATCAGACTGTTTTAGGCTGTCTCGTGAGTCGAGGAAGAAAGTAAGTTTTATCATTTTTGCACTCCTAACTGCTTTCGAAACTAAAATAGGATACATCATTGTTTTGCAAGTAAATACTGCTTCATTGACTACCGATTGGATGAGCATCACTTTGAATGCTCTATTTTCTATGGCTACTAGCCTCCGATTAATTAGAAATAACTTATCCCACTTATCCACAGTAGAG # Right flank : CTTTATTCTTTTATTAATAATTGAAATACCCTACGTCACATCTCCAATAACGCCTTCACTATACTACAATACTCTTCTGAAACTTGATTCGTTTCAATATAACTGTCATTTAATTTTTTCCCACTTAAATGTCTCAATTTTTTTGGTTTTAGGCTTGCTATCACCAATCTGTGGTTATTGTTTTTCAAGTTAGCAAACACAACACACATACCATGCTTATCTAAAAGATCGATTAATGATTTAGTAACTGCGTTCTTTAATTTGCGATCATATTTAAGCATTTCTCTTAATTTCTCGAATAAATACAATAACGAATATTTATTTTTTGGTGATAAATAATTTAAATGCGCTATACGATTTCTGTCATTTCTCTTAGAAACAAACAAGTTCTCCCCTACCATGAATTTATGAAGTTTTTCAATATGTTTTGGCCATGTTTTCCTGCGTATTTTTTTCCAATATTTTTCAGTAGTATTAATCCAGCTATCCACTCTTTCGGT # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCCTCTTCTGTTTTGAGGTACTCTAAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.40,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 364218-364584 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARZR010000003.1 Listeria booriae strain FSL L7-0058 NODE_3_length_370717_cov_30.703907, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 364218 36 100.0 30 .................................... ATAATTCTATTATGCGTCCTCGTAGAAAGT 364284 36 100.0 30 .................................... TAAACGCGCTAACTAGATACGCCGTGGCGG 364350 36 100.0 30 .................................... TTACCGGCTACAATTGTAGACAAACGAACA 364416 36 97.2 30 ..........C......................... GCGCAAAAGGTGCTGGCGTTAACTTCAATG 364482 36 100.0 30 .................................... CGAGTGATACAAAAACATACGCCAAAGCGA 364548 36 86.1 0 ..........................TG.A..C..A | A [364577] ========== ====== ====== ====== ==================================== ============================== ================== 6 36 97.2 30 GTTTTAGTCCTCTTTTGTTTTGAGGTACTCTAAATC # Left flank : GTTTTTCTTGGTGTAATACCGCTGACATTAATTCTGTTATTTCTTTGTTGATTGCTATTTTATGTTTATTTTTTTCTTTTTCGTTGAGTTTCCTCACTGTTTTGTTGAGAATACTCTTATAAAACGACTCTTTCTTTTTATCAAATATAATTTCTTCTGTCTTGTTCTCATCAATACCTTCATAAACCAACTGGCCTTCTTTACTTGTCCTCTCCATTACGATAGTTCTTCCATCAACTCTCATTTTGGTGATTTTCATTTGTCTGCTCAGCTCCATTTAGTTTTATAGTTGTATAGCTAAATGTTTCCACTTTCATATGTGTCTGATATTGCTAATATTTATCAATATATTCATTATACAAGAAGGTATTGCGCAAAACAACATTCATTGGCAATTATCCACTTTGCTAATAATTGAATAAAGCCATAAAAACTACTGATCCAATTCTTTGAATCACAGTTTTTATGGCCTTATTGTCGAATACTTATCCACAGAAGAG # Right flank : ATCTATTTTACTTTCAACAGTTTAACTATACCAAATTATTAGTAACTCTGCATCTTCGCATAATCACACGTACTGAATAGTAATTTCCCGTACTAAATCAACAAAAAAACACCATAAACCGTATCTTACACAGCGACCTACAGTTTTTCCCGTTCTTTCTTATCGGAGAAACGGGGATTCTGATGGTTGGATGAAATGTACTCGTTGTGCTGGTGCTGGTTTCAACGCTTATAATGTTGGCTGCGTGGCAATTTTGTGGCAAATAATTTTAAGATGGTGAGAGGTTTTGTTCGTCATCTTCTTTGTTGTGTGCTGACTTGTTCTCTTCACAGCCATTGTAATTGGAAATATTATTCCTCACTTATACACAGCAGAGGTTTTAGTCCTCTTCTGTTTTGAGGTACTCTAAATCATGCATACAAGTACAACGGAACAGACAGTAGTTTTAGTCCTCTTCTGCTTTGAGGTAATATACTCACCTATTTCACATACAATAACAT # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCCTCTTTTGTTTTGAGGTACTCTAAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.40,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 59151-59706 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARZR010000018.1 Listeria booriae strain FSL L7-0058 NODE_18_length_60552_cov_31.215854, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 59151 30 100.0 37 .............................. CGAATTACTGCATTATCATAACCCAACATCGTAACAA 59218 30 100.0 37 .............................. ATTTAACGTGCGTTACGTTCGAAATAATCAGCTATGA 59285 30 100.0 35 .............................. TGTTCTAAAATCTTCAACTGCATCAATCAACTTGT 59350 30 100.0 35 .............................. TTAGAAAAAAACATTTATGAATTAGTTACGCGTAC 59415 30 100.0 34 .............................. AAAACAGGGATTTCGAATCTTTATATCTCTCCAA 59479 30 96.7 36 ........................A..... GAACAATCAGAAGATGATGATGGCAAGAAAATATAC 59545 30 93.3 37 ...........G..............G... ATGACAATTACAGATCTTGACAGCCACCAGGGAGTTG 59612 30 100.0 34 .............................. AAGTGATTAGCAGCTTGATTTAGCAACATACCAC 59676 30 83.3 0 ....................G...A..GCC | C [59696] ========== ====== ====== ====== ============================== ===================================== ================== 9 30 97.0 36 GTTTTTATCTAAGTAATGTGTAATGTAAAT # Left flank : ATGCTGAGCGCAATATCAAACCAGTACCGAATTCCGAGAAAATTTGGGATGCGGATATCGTTCTAATTGCCGTCGGATTTGCAGGCACAACCAAATCAGTGTTTGAAGATTTCCAAGTAGCAAAAACAAACCGTCACACAATCGATGCTAGAAAAGGTTTTTACCGTACCAACGTAGAAGGCGTTTTCGCATGTGGCGACGCAAGATACGGCCAAAGCCTTGTTGTAACAGCGATTAACGAAGGAAGAGAAGCCGCCCGCGAAGTAGACTTCTATTTGATGGGCGAAACATTCTTACCATGATAAAAAATCTGTCGACCTCCAGTAGCGTAAAAACTCGGGGACATCGACAGATTTTGTTTTTGCATAGGGGGAGAAGGGGGGGAGGATGGTTTTCGAGAGGTATAAAAAAATAAACAGATGCAAAAAAGACAAATTTCTTGGAGGTCGACAGATTTGGGGTGTTGAGGTATGATGGGAGTAAGAGTTGAGAGGGTACCT # Right flank : CCATAGACAAATGTCTACATATTTCCTGAATATATGAGGCTAGCTTAAGTATTAAAAGTAAAAGCCGATACTTAAAGTACCAGCTTCATAAATTTAATTTATTTAAGAAAAATGTCTTTGTGGAATTCCAGTTTGTTTATTTAATAATTTTGTTCGTTTGCTATCTTTGTAAACATACAAATCATTCCTGTACTGGTAATTGTTGGCGTATTGTTTAATTGTAATATAAGCGGTCTTATTTTTAAACTCGCTTATAACACCATAAACGGAAAATGCTGCGGCTGTCCAACCAAGGCCAGGAACCAAACCCAGTCCGATTAACACTAGTGCTGCACTTGCCTTACTAACTTTTGTCATCGTAGCTGTAACATTTCTGCTTGTTACTAGTTTCATTGTGCTATTTGAACTTGCTTTTAATAGGGGAGTTGAGCTATTTTCTTCAGATACATCGAATGTACCAACTTTTTTTCCATCTACTATGATATTCGTTGTGATTGTAT # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTAAGTAATGTGTAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 43641-45130 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAARZR010000019.1 Listeria booriae strain FSL L7-0058 NODE_19_length_47953_cov_30.840819, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 43641 30 100.0 37 .............................. CGTGTTTCGTCCCGTTTGATGTGGGCACCGGATCTGG 43708 30 100.0 35 .............................. CGTGTTAAATCGGGCGAAATGTACTGGATTGGCTG 43773 30 100.0 37 .............................. TCTTGCGCTATCACTCTTGCTTTGTAAAGCATCTTGC 43840 30 100.0 36 .............................. GTATATTTTCTTGCCGTCATCATCTTCGGATTGCTC 43906 30 100.0 36 .............................. TGCGTCGGCTCGATTGCTGAATAATCCAATTCGTTC 43972 30 100.0 39 .............................. TTAGATGCCTTTGAAATTTACTATGTTATGTATAATGAG 44041 30 100.0 36 .............................. GCCAGACACATTCATTCAAAGAACCCCATTTCTTGT 44107 30 100.0 36 .............................. GTTTTCGTGGGAATGTATTGTTCGGGCATACTACTT 44173 30 100.0 36 .............................. GACTAAAGACGAGGATGGTGTCATATGCCCACATTG 44239 30 100.0 37 .............................. AAAGCCGTGCATAAGGGATTAGCGGAAGGTCAGAAGA 44306 30 100.0 36 .............................. AGTTAGAACATCCTTGACAGCTGTATAGGGTACATT 44372 30 100.0 37 .............................. GAAGGTAAAATCGAAACAATTAAAGGATATTATGTAT 44439 30 100.0 36 .............................. GAAAGTACCTGTTATCTCCCCATCATCTGGAGCCAC 44505 30 100.0 36 .............................. CCTGATGCGATTAACACTCAATCAGAAGTGGGCGGC 44571 30 100.0 37 .............................. GCATAGCCCCATCACCTCTGCGGTAAGGGAATACACC 44638 30 100.0 37 .............................. GAAGACGGAAAAGTAATAAGTGAAGGCGGCATCTGGG 44705 30 100.0 35 .............................. ACCAGTGAGGATAAGCTACAATTCCAATCTGTGGA 44770 30 100.0 36 .............................. ATGTCTAGCTCCCACAAAATGATGTAGAGTAGGTGG 44836 30 100.0 36 .............................. TTCCGTAAAAACGGTTCATTACACATTCCAGAAGAT 44902 30 100.0 37 .............................. AGTAATAGGAGGACAATATGAGAAAAGCATTAATTTT 44969 30 100.0 35 .............................. TAATGTAAACACATATTAAATCACATTAATGCTCA 45034 30 100.0 37 .............................. GGACACATTACGGTGAATTTGCGGCAGGTAAATCAGG 45101 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 23 30 100.0 36 ATTTACATTTCACATTACTTAGATAAAAAC # Left flank : ACTAACTGCATATGATGCCAATGGTAGAGTACTGGACACAAAAACTGTCACTCTCGCAAATCAAATTGTAGCAACCGGTTCTATCACCACACTTGCTCCATTTGTAATTGGTAAAGAAGGCTATGTTACTGGTCAATTCTCTGGAGACGTAGCGAAAATTAGCCTCACTGTGAATGGTGTAGAGGGCGTTAAAATCCCCGTTACTGCACCAGCTATTAAATATTATGCAAAAACGGTCATCCTTAACACGACAGATAGCGCGCACATCACTGCTTACGATATCAATGGTAACGTGCTTGATACCAAAGTAGTTAGTTTGAGTAGATAATTGCATACTAAAAATTTTCATCAGAGAGGCCAATAGATTAAGAGGGTTAATATTCATTTTTCAGTATTAATGGATATTAACCCTCTTGTTATTCAATTCATTTTATTATGTTTTAACTCCTACTTTAGATAAAAATAATACTGGCAATAACATGATTTGATGCATCGTAATC # Right flank : CAGGTACCCCATCAACGCTTACTCCCATCATACCTCAAACTCCCAAATCTGTCGACCGACAACAAAATGCTAAATTATTGCCCTCAAACCTTACAGCCCAAACTTCGAAAACAGGCTTAACCTCTTTAGTATCAATACATAACAAAAATCTGTCGATGCCCCCATTATTTTGCACTACTGGAGGTCGACAGATTTTCTTCCTGTTATTACGAATCTAGATTATCTGTAGAAATTATATTTTTCTTCCCGTTTTGCACAATTATCGCGCTATTCGCAGGAATGGTTTTCTTTTCGTACTCAAAATTCTTGTTCGAGAAATTCGCTATGACTTGTAGATTCGCGCCAAATGTTGTTTTCTGAACGAGGCGTTCTTTATCTAGCACTTCAAAGCTGCTCATTTCATGTTGTAATGCTTCTTTTTGGAATGGTTCCCAGTTTTTCGTATTGCTGATGATGTCTTTTTTATGCAGTTTCCAGTTGGCTTCGTCGAGGTGGAACAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTTCACATTACTTAGATAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //