Array 1 1238161-1239296 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNSG01000001.1 Streptomyces sp. 2112.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 1238161 29 82.8 32 A..G.......G.AT.............. GAGGCCAGAAAGCCTGTGGTCATGGAGCTGGA 1238222 29 82.8 32 A..G.......G.AT.............. TCCCGGCCGTCCAGGTCGGCGTGGTCAGCGAG 1238283 29 82.8 32 A..G.......G.AT.............. TCGTAGACGGGCGGGGCCGCGGAGCCGAACAA 1238344 29 86.2 33 G..G..A....G................. TGAGGCGTTCCGGGCGTAGTCCGGTTGGGGTGG 1238406 29 79.3 32 TG.G.......G.AT.............. GAACCCGTCCCCTGGTGCCTGGACTATGCCCT 1238467 29 82.8 32 G..A.......G.AT.............. GGGGGCTTGATCAGGTTCTTCCAAACCCAGCC 1238528 29 79.3 32 G..G.......G.AT......C....... TACGTCCACGGCCTCATCGATCTGACCGGCCA 1238589 29 79.3 32 G..G..T....G.AT.............. ATGTCTCCAACCTCCGTTGATGTGTTGTCATT 1238650 29 100.0 32 ............................. GGGACGTACCGGTCCTTGAGGGCCTGTGTGAG 1238711 29 100.0 32 ............................. AGACACCAGCCGTTTCCCCGGAGGCCGCAGCG 1238772 28 75.9 32 G..G.-.....G.AT......C....... GATCTCGCCCTGCTGGACGGACTCCGGGACAT 1238832 29 72.4 40 GC.G.......G.AT..A...C....... GGTGGATCCGCCGCTCGAGTCTCTGCTCGGAGCGACACGC 1238901 29 72.4 32 G..G.........AT.T...A...A.A.. GTCTGGTTGGGCTTGGCCGGCGTGGATGCGGG 1238962 29 96.6 32 .................A........... CGGCTGGCCGCCCGGTCCGGACACGGCGACCG 1239023 29 100.0 32 ............................. ACCACCGCCGAGCGCAGCCGCCGCCTGCCACC 1239084 29 96.6 33 ...T......................... CAGGCAGCCCGCGGAGCAATCGCGGGCGGCGTC 1239146 29 93.1 32 G..G......................... ATCGCAGGCGCCCACACCGCCTTCGTCGGACT 1239207 29 100.0 32 ............................. TGGTCCATGATGTCGCCAAGGTACTTGGCGCT 1239268 29 96.6 0 ...T......................... | ========== ====== ====== ====== ============================= ======================================== ================== 19 29 87.3 33 CTGCTCCCCGCACCCGCGGGGTTGGTCCC # Left flank : ACATCATCGAGTGCTGAGGATGTGGGCCCTGACCAGCGTGTTCGCCTCTTTCAGCGCTGTCAGGGACTTCCCTGCTTACCCAGCGGAAAGTCCCCGAAAAGTCCCCGGGATGTCCCCGGCCGGCGAGGGCCTCAAGGGAAGCCATCCGCTTATTGCGGTAGGCGGAACAGCTCCCCGGCAGCACCTCCATCAGCCCGGCTGCAGAGGGCCCACCGTCAGCGGGCGGCCAAGCAGAATCGGGCATCGCGCCCCCCATGGCGCCAGCTCCATCCCGGCAAGAGCCGTCGTGAAGGATCGAGAGAGAGCCCAGTATTAGCCTGGGGACACCGACATCACATGTACCAGCGGTCCGGCGCCGGAGCGGTACCCCAGGCCACAATGGCTCCGCGGACCACTGCCGCCCCGCCGGACCCGCAACCCACTCGAAGGCCATTATGTCCGAATCGCTGAAACTAAGTAAAAACAACTCATCGTCTTCCTGAAACCGCAGCTCACGACCT # Right flank : CCGGGCGGCGATCGTGCCGAGGGTGTCGCCGTATTGCCCTGAGCGATCTTCTTGTCGTAGTACGACCTGGACGCGGGGTCGGCCAGGGCCGCGAACGCCGAGAGGAAGAAAGCCCGTTTGAGCTGCTTGTTTCCCCGCCGGGATGGTTGCTCGTCGTGGATCGACGAGCCCGAGCTGCGGGTCACCCGGGCGAGGCCGACATAGGCGGCGAGGTGGGCGGCGGACGGGAAACTGCTGCCGTCGCCGACGCCGATGAGGTTCCTGGCTCCGGTCCTGACGCCGATGCCGGGCATGGACGTCAGGACCTTGGAAAGAGGTTGGGCCTCCAGCAGTTTCTCGATCCTGACGGCGAGGAGTTTGCGCTGGTCAAGGACCGCCTGGAGCGAGTTGGTGAGGCTGGGGACGATCAATGCGGCCGCATCCGTGCCGGGCACGATCACGGTCTGCTCGTCCAGGGCGGTGAAGGTGTCTTCGACTAGCCGCTCGGCCATCCGCGGTGC # Questionable array : NO Score: 4.93 # Score Detail : 1:0, 2:3, 3:0, 4:0.36, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGTTGGTCCC # Alternate repeat : TCCCCGCGCATGCGGGGTTGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCACCCGCGGGGATGGTCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.50,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1243014-1243351 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNSG01000001.1 Streptomyces sp. 2112.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1243014 29 100.0 32 ............................. CAGGGGCAATGAATGATCCGGCCGATGGCATC 1243075 29 82.8 32 G..G.......G.AT.............. GCGTGGATCGCGGCAGTAACAGCGGGCCCGGC 1243136 29 96.6 32 .................A........... ATCTGCCGCGCGATGAGGTCGCGGTCGATGCC 1243197 29 96.6 31 .....................A....... GTAGTTGGTGTCGCCGCCGTCGCGCCGATCT 1243257 29 93.1 32 ....A...................C.... CGGCCGCAGAGGGGGCCCAGCCGTACCCGCAG G [1243274] 1243319 29 82.8 0 ...........C......A.CA.C..... | CA,G,G [1243327,1243334,1243349] ========== ====== ====== ====== ============================= ================================ ================== 6 29 92.0 32 CTGCTCCCCGCACCCGCGGGGTTGGTCCC # Left flank : GGCACCCACGACACCTGGGTTCGGCCCCAGGTTCAGCTCGGGAACCATTACATGGCCGACTTCATGATCGCCGGTGAGACTTCCCTAGGGCTTCGCTGGACGCTGGTCGAACTGGAGAGCCCGGTCAGCCGCCTGACCAACCCCGGCAACAAGCGGGCGACAAAAACCCTGCGCCACGCGGTCGACCAGATCGAGGACTGGCGCAAGTGGCTTTCCAACAACCTGCACTACGCCCGCTCCGCGCGCGGTGCCGACGGACTGGGCCTGCCGGGCATCACGGCCGAGGTTCCCGGCTTGATCATCATGGCTCGCGAGGACGCCGACGACGCGGCTGCCGACATCCGGGAACTCCATGCCCGGCGCTCACATATCCAGGTACGCACCTACGACTGGCTGATGCGTATTAACGAGTCACCCGACCCCCTACGTCGAGACGCCCCCGACCAGCGCCTTCGACTCGCTTGAAATCAGCCGCACATCCACCCCTTCTACGCCATGAG # Right flank : CGCCTCCACTGACGACATCATGGCCACAAACGCCACCGAGATCCCGCCCTGCACCCCCTGGCCGGACTCCACATCGCAGGAATCTTCCTCTGGTCAGCCCGATAATCCAAACGAAACTTGCCAGCTTCTCCCACACCTACACGTACTGTCCTCTCTCCCCGGGACGGGCTCCCCGGCCCTCCGTCCCACTGCCCGGAATCGGGCTCACGGAGCACGCTTCGACGCTCGTGTCGACCGAACGATCGGGACATGCAGGTGAATTGTCATGGAATTGCCAAGTTGCCGCAGAATCGTGGCGGCTACCGACAACGCCCGGGAGTTCTCGCATGTCCCATGTGACGGAGACAAATCCGCTCGCCCCTTACGTCCGCGGCGACCTGCCCGGCCGCTTCAACGAACTCGACGTGCTCAGGCGGCACTGGGCACGGTTCGCCGCCGTGTCCCAGGGCGCGGTGGTTCCCCCCTATGAGGTCTTGGTTCATCCCTCGAGCGGATGCAAT # Questionable array : NO Score: 3.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [5-4] Score: 0/0.41 # AT richness analysis in flanks prediction: F [40.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //