Array 1 637-791 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIOP010000040.1 Coprococcus comes strain MSK.11.23 NODE_40_length_23242_cov_298.775, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 637 29 100.0 34 ............................. TAAATTATACTGCAAAAAAAACCAACTGACTGTG 700 29 96.6 34 .......................G..... TTATTTGCGCTGCAATCGCAACCAACTGACCTCT 763 29 96.6 0 ...........................C. | ========== ====== ====== ====== ============================= ================================== ================== 3 29 97.7 34 CTGGATGTCAGCAAGAATACGGCATTGAC # Left flank : CCACGGCATTTGCCGAGAGCGAGACGGAAGAAACACCTGTATGCACCTGCGAAATAGCTTGCACGGAAGAAACAATGAACACAGAGTGCCCTGTCTGCGGTGCAGAGGGTGCTTTGGCAGAAAACTGTGGGAAACATGTCGAACCAGCAGCCGAGGGTGAAGCATCCCAGCCGGAAGGAGAGGAACTTCAGGAGAACCAGGACAGCGATATGCCGGATACACAATCCGAAGCAGCTCTAGCACAGGTGAGCGGCGAAGGAGAGAATGGCATCGCTGTTCAGAGTGCCGGTGTTGCTATTGACAATACCAACTTTCCGGATGCAAATTTCCGCACTATTGTTGAATACTATGATACCAACAAGGACAGTAGTTTAAGTGATACAGAAATCGCAGCAGTTGAAGAAATTGATTGCTATGACAAAGGTATCTCCAATCTGAAAGGCATTGAATACTTTACAGCACTTCGTTCGTTGAACTGCGGTTACAATCAACTGACCTCT # Right flank : CGAGCGTATCGCTCATGGGAAGCCACTAAGGAACAGACTGCTGATCTGTATCATAGGATTCTAACCTCTGCCGGGTACTCCGCCAGCTCCTTAGAGAAGTATCATTATCTTTCTGACTGTCATCGCCATGTCAGGAGCAACCTGACACTCATACCGGGAGTTCTCGCTGTTCTGCATCCACAAAAGTTATGGCGTACCCGATAAGGTGGCTATCATCAGAATTAACGTCTTAGTGACCTGTATATTCAGTTTTCAATTCAAGTGAAAGGATTCCATTTTTATTGATTGGAATTACTCCCTTCACTTATTTGGAATTGCTCAGGCTTTTGACACCCTATTTTTTATAAATTTTTTTAATTATTTTTTTGAGAGAGATTTTAGAACAATAGATAAGTAGAAAAAGCTTCAAATCCCGTGTATAATTAAGAAATAAAGATAGAAACAAATCGGAAGTTGTGAACTTAGAATTAGAGGTGTTGAAAATGAAAATAATAATTATA # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGGATGTCAGCAAGAATACGGCATTGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 3110-1061 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIOP010000002.1 Coprococcus comes strain MSK.11.23 NODE_2_length_140949_cov_202.653, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 3109 30 100.0 36 .............................. TCTTTTAACAGTTCGATCTTTCCGTCTACTATTGTC 3043 30 100.0 35 .............................. AATACGCAGAAAGTGAACTGAAAGATCTGGAAGAT 2978 30 100.0 35 .............................. TTCATTAAAGTAAATTTTTTTTCATCTACCATGTA 2913 30 100.0 35 .............................. CACCAGTTTTCTCCGCAGATATCCGTGATGTAATC 2848 30 100.0 36 .............................. CTCCTTTCACCCATGCTTTCCCGTCTTTCTCCTTTG 2782 30 100.0 37 .............................. CCTGTAATGTCAGAAGAAAAGTCCTTTTCTGTCCATC 2715 30 100.0 36 .............................. TCCCAATACTCTGCGATTTCCTGTGCTGCCGGTAAG 2649 30 100.0 35 .............................. AAAAAGACATTATAAATGGTACAGTGAGTAGTATA 2584 30 100.0 35 .............................. GATGCGGACAATGCCGACAGTTTTAACGATTATGT 2519 30 100.0 35 .............................. ACTTGGTATTCCCTATGAATTTGGTGAATGGACAG 2454 30 100.0 35 .............................. TTACGAATGAGGCACTATCTGTACCGCTGATATAT 2389 30 100.0 35 .............................. AGAAGCATACCAGTCAGAGCCATTGAAAGCAATGA 2324 30 100.0 35 .............................. GACCGAGTCCACCGGCCATATCCCCAAGTGCCGCC 2259 30 100.0 36 .............................. GCTTGTCCGGCACATCATCAATGGTCTTAACACCTT 2193 30 100.0 34 .............................. ATTTGCTGTACAATACCTTCGACAAAACCACAAT 2129 30 100.0 34 .............................. TTATACTCTTTGTTTTCTTGTGCTGTCAATACTC 2065 30 100.0 36 .............................. ATGGTATATGTAATTTTCACTTTTTCCTGCTCTTCC 1999 30 100.0 34 .............................. AGTTTGAGTGTACAGCTGATCTTGAAAACGACAG 1935 30 100.0 34 .............................. ATTAGTGGTTCTTTTAGCTTGAAACCTCCAAGTG 1871 30 100.0 36 .............................. ATCAGTTGCACTCTAAGTAAAAGCATGGTGCCCTTA 1805 30 100.0 35 .............................. GTTCTTCGATGGTCTTATCTGCCATCTTTAACGCC 1740 30 100.0 34 .............................. GCGCAATTGTGAATGCTTTTACGAGCCAGAACTG 1676 30 100.0 35 .............................. GAGACTGCGGGTGAAATAAATCACGGTTGACAGCA 1611 30 100.0 35 .............................. TCAGGTCGGCCTGTGCCGTTGCCGCAGCGGACTGT 1546 30 100.0 36 .............................. TTTGTAGTTCCAGGAGATACTATAATCAATGGCGCT 1480 30 100.0 34 .............................. CTCAATGAAAGAGTGAAAGAAGCAATGGAAAAAA 1416 30 100.0 35 .............................. GAGCTACCGGACGCCGGGTTGCCTGTTCCCTCCCA 1351 30 100.0 36 .............................. CATTCGGATTGCTGATACCATTCAGCTGCGCAACCT 1285 30 100.0 35 .............................. TTCATGATCTGCTTCTTTGCAGCTTCACTAGAGAA 1220 30 96.7 35 ............T................. GCAGAGAAGAAATTACCAGAAACAGTACGGTAAAG 1155 30 100.0 35 .............................. GTTTACTTTTGAGGAAGCAAACGCGGAACTTGCGG 1090 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 32 30 99.9 35 GATAAACAATAACATGAGATGTTTTGAAAT # Left flank : TTGAAAGAAGGGATGTAATGAAAAAGAAGAAAGAATTGAATTATAATTATGCATTTTTGTTTTATGATGTGAATGAAAAACGAGTTCAGAAAGTATTTAAGATCTGTAAAAAGTATCTTTCACATTTTCAAAAGTCTGTATTTAGAGGAGAGATGACGCCATCAAAGTTTATACAATTGCGGAAGGATTTGAACCAGGTAATAGACAAGGATGAAGATTTTATTTGCATTATCAAGTTGATGAATGACAATGTGTTTGGAGAAGAAGTTTTGGGAAATGGAGGGGAGGTAACAGGAGAAAGTTTAATGATATAATTATAGGATTTTTACCAGGCGGAAAAAGAATGAAAAATCCAGGAAAGCTTGAAAAATTAAGAGATTTATGGGATGATAAGTAGGGCGGTCCAGGATAAGGGTGTTGGCTGGTAAAAAATGGAGAAATATAGAAAATATAAGGGGAAAAAGGGGAGGGGAGAAACTAAAAAACGCGGAAATGCGAGG # Right flank : AAAAAAATTGCACTTGCAGGTTTGAAGAGAAAAGAGATAAATAATAACCTTTTGTGGAGCAATACACAGTTTACATTTTAGAATCTGTGGAAAATATAACGAAGAAAAATGGAGAATAGATGAAAAAAGTAAGATGGATTATTTTCGGAATGTTAGTAGCTTTGCTTGCAGGATGTTCTGGAAAGAAAACAGCAGAAACTTCTGTGGATGCAAAAAATGCGGAAAGTACAGATGAGAAAAATACGCTTGATTTTGTAGATGCACACGGAGAGCGTTATACGGTGGAAATCAATGAAGCAGTTGCGAAGAATCCGTATGATAAAGCACTTTTTGTAAAAAATGAAAATAAGATCAGCTATGAGGATAAGAAATATACTTCAAGGCTTGGCGTAGACGTATCTGTTTTCCAGGGAGATATTGACTGGGAGCAGGTGAAAGCAGCAGGCTATGAGTTCGCAATTTTGCGGATCGGATATCGTGGCTATGGTGAAGAAGGTACG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAATAACATGAGATGTTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //