Array 1 221049-221316 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQUH01000007.1 Vibrio gazogenes DSM 21264 = NBRC 103151 strain DSM 21264, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 221049 28 100.0 32 ............................ AATCTCCGCAAGCATATCGAAGACCGGGTTTT 221109 28 100.0 32 ............................ TTAGACCAGTAATAGCCATGGATGTGCCACCG 221169 28 100.0 32 ............................ GCATGTCGGTGTAGGCGCACATGCCTTTTTCT 221229 28 100.0 32 ............................ ATAATTCCCCTTTTGATTTTATCTGTACTCAT 221289 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 5 28 100.0 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : CCCTGAGTTCTTAAAACTCAGGTTTCGGTTGGTGTTGGGGGCTTGAAGTGTGGGGCGTGATTTTCTGTTGCATGGGGTTAGTAGTCTCCGGCCCCAAATTTTGACGCACAATTACGTTTTTCGGTTTCAGAAGCATCGGAGCACGGTGCGCCAGTTCATCTTTCAGAGATGAAAGACGAACCAGAAAATCTTTTTTATTTGACGGTGTCGCACGTTGTCCAGAACCGACTTTTACGGGCGTCCTGCCCGGAAAAGCCTAACCATTCTCCCGGAATGGTTTTCTTTGTTCAGTGGTTGATTTGGATTGGGTGAAACATAGCAAAAAGCCAATTTGATCGATGCGCTCAGGGTAAAATTTAAGTTGTTTAGACCTTCTTTTTTTGCCCCTAAAAAATAATCAATAAAAACAGCAAGATACAGAAGGGCGATTTTAACAAGGTAAAAAAGGGTTTTTGCCGCTAACCGCTTGCTGCCGTTTATTTTTTCATGATATGTTCATT # Right flank : ACTCGCCGCCGGGCACTCGAACATGCCCGGCGTCAGACTCTGGTTTACTCATCAAGCATGATTTCTTCTTTCCGCAGATTCATTTCATCAAAGGTAATCAGATTATTGAGGTACAGGAGCACCTCTCGCAGTTCATTTTGATCGATACTGGGGTGCGAATTGGTGACAAGACAATCAATCAGACAGTTGCGAGCAGTCAGGTGTAAATCGAGGTTGTTTTTTGACATGGAAAGCCTCTTCGAGAATATGAATTTCCCCACCACGCAAAGGTTCCAATCTTTAGGTGGTGGGCTGAACAAGGTTGGAACAACCGCCTCGAAGTACGGCCAGCATACGCTGCCTTGCCAGCTCACCATAATTTGAGCGAATCAAGGCTACACATAAAAAAACACTGAGACAAGTTCAGCATATGATGTGCTATCGAGTTTTATCGGTGTTCCAATCCCGACACCGTTTTTTTGGTGCTTGCGTAGCGTAAGTGGTATCAGGGATGTTGACGA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.60,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 32524-32086 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQUH01000010.1 Vibrio gazogenes DSM 21264 = NBRC 103151 strain DSM 21264, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================== ================== 32523 35 100.0 31 ................................... TTGTTCATAATTTACTCCTAAGTTGTATAGA 32457 35 100.0 33 ................................... TATTGAAGCTGCTCAGGCAGGTGTGAATGGCTA 32389 35 100.0 32 ................................... TTTAAATCATTGAGTTCCAACATAACCAGTTA 32322 35 100.0 34 ................................... ACAAGAATTTTCCCAACATCATCAATTATAAAAT 32253 35 100.0 32 ................................... ATTAGTTTCTATTGGCTCCCCAGATGTATTTT 32186 35 100.0 31 ................................... CTCCTAGAGCCCATGGTGAAACTTCATAAAA 32120 35 85.7 0 ..............................CGTTG | ========== ====== ====== ====== =================================== ================================== ================== 7 35 98.0 32 ATCGGAAGACACTGGCCGAGACAGGCCGTTAAGAC # Left flank : CATGCACGGCTATTTTTTCAGTTGACGCACATGTAGAAGTGACCGGCAATTCAATTGGTATCTGATAAGTCGCCATCCCTTGATGAACACTGAGTTCTCCCGGCAAAGTACCGACTGTTTCAGTGATAGCGGCAGATTGTGCATATGATGCAGACACAAAAATATTGACTTCTATTCGATTAATGCGCTGAATGGGCTGTCTCCCGATATTGAGGTTCAGCCCCCATAGGATAACGGTCCAAACTTTTTGGTGTGCTCCCGCGAGCCCATCGGCAGATCGGTCAGAGTGCACAATTCAGTATGAAACCTCTGCACGCCTCGTTTAACGCTTTGAATCCAAACCAGAGCCGATGATATAATCAACGCTTGTCTGACGAGATTGGCAATTGGCTGATCCCCCTTGAAAAGGGCCAAAAGAATGAGGTTTTCTATGTATATTTATACAGATCGGCCAAATTGCTTTGCTCAGCCCTTATATATCAAGGCTGTCAGGGGGCGCT # Right flank : GGAGGATTGTACTTTTCTGAGGGAAAGAATAATGGCATCTGACATGCGGTCAGTATTGATGGCAGGTATTGGCTGGCAGTTCACATGCAACAGACTGCCATCCCCAATTGACCTCGATATTGACTGCTATCGGGAGCTTCGATGGAATGGCTAAAACACGAGCGGCTCAAGACCCGCACTATGAGCGTCTGCGAATGATATCGAAGCTAAAGATCTCATCGGAATAGTAGTCTTCGGTATAACAAAAAACTTCGCCTGAATCACTATAATAAGTTTCTTCTAAGAGAATGAAGGGTTCCAGCGCCACGTCCATTTCCGGGATATCTCGCTGTGTCAGAACAACGGATTTTATTTTGGTTTTCGCGTAAGAAATACTTTTACCGGTCTCTTCAAGATAATCGAACAGAGAGCCACAGAGTGCATCATCACTCGCATGTTCAATGGCATGCAGCCTAAAGTGATGAATATTAAACACCGCTATTTTGTCATTGGCATACCTC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGGAAGACACTGGCCGAGACAGGCCGTTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.50,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 4749-4442 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQUH01000002.1 Vibrio gazogenes DSM 21264 = NBRC 103151 strain DSM 21264, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ==================================== ================== 4748 35 100.0 34 ................................... GGCTAACTCTTCAGATGTATCACGAACTAGATCA 4679 35 100.0 36 ................................... TTACTTTTACTCCCTACACCATTAGGCCAAAGCTTC 4608 35 100.0 32 ................................... CTTACTTCTTCAATTGGGGTTCGTGCATCTTT 4541 35 71.4 28 ............TA.......G..A.G..AA.CCT GCTAGATTTTTAGATAACAAAGCTTCCT 4478 35 91.4 0 ............................C...A.A | A,T [4447,4451] ========== ====== ====== ====== =================================== ==================================== ================== 5 35 92.6 33 GTTTCAGTAGGTCTGGCCGTTTAGGCCGTTGAGAC # Left flank : GGCTTCAACCGGATAAAGGTTGCAATGATTCAGAGAGGCATGCCAGCCATCGAATACGCCGAAACACTGAATCGGCCATGCTTGCGTTAATGCAATATCAAATAAATCGACTCCGGTGAGTGTGTCCATCGGAGCAATCAGGGTATAGCGAGGGTTCATTAGCTATCCTTAGCAAGAGCAGAAGATTATTTTCTATCATGCAAAGAAACATCACCGGGATCCAACGGTGATATATGCAATTGTGAATTAAATCAACCAATCGCATATTCAAAATGACAAAAATAACGTTGTCCACAAGCAATCATCCTGTCACCAAGCCCCCCACACCGCCTGCGCCATGCTGCTCACAAAAACGCTATACAATCATTGTATTAGCCAGAAATTCCCGATATCTTATAAATTCTACTGACATTGTTCTGACAGGTGAATCTGTGGATAACTCGAGGCCATCCAAAACCGCATTGCAAGTGATTGATTTTAAACTTTCATTACGGGGGTGG # Right flank : ATTTGGCAACCGCTTCTCCGTCCGGTTGTTTCACCCAATTCAAATCAACCACCCAACCAAGAAAACCATTCAAGGATGAATGGTTAGGCTTTTCCGGGCAGGACGCCCGTAAAAGCTGGTTCTGGACACCGTGCGACCAAGTCAAACAAAAAAGATTTTCTGGTTCGTCTTTCATCTCTGAAAGATGAACTGGCGCACAGAGCACCGCAGTTTCTGAAATTGAGAAACCTGATTGTGCGTCAAATTTCGGGGCCGAAGGCTGGGGAGATGAATATTGTGTCGCTGTTGTTTGGTGCGCAATGAGTTTATTAATTTCTGCGGCATCTGATGCACGCGCCCCAGATACTTTTGGCGTTCCAAAAGTACCCAAAAGAACGGTTTAGTTCGTGGGCGCTGGCCGGGTCGGATTGATTCGCATCCTGCTCAAGCAATCCTGAAAAATCGTCCATGATTTTTCACCCTGAGATCATCGATCAATTTGGCTTTAAAAATATTTCCCC # Questionable array : NO Score: 2.69 # Score Detail : 1:0, 2:0, 3:0, 4:0.63, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTAGGTCTGGCCGTTTAGGCCGTTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 9434-9264 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQUH01000002.1 Vibrio gazogenes DSM 21264 = NBRC 103151 strain DSM 21264, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 9433 29 100.0 42 ............................. TGAGACTTTGTTGTTGCAACAACAATTCGTCAACTTGTCGTT 9362 29 100.0 41 ............................. TGAGACCACTTGCACAAGCAAGTATGTCGAAGTCGCTAAAC 9292 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ========================================== ================== 3 29 100.0 42 GTTTCAGTAGGTCTGGCCGTTTAGGCCGT # Left flank : GGACACCGACATAACCAGACGAGGAGCTGCACGATGAAAGTTTATCTGGCATGTTTTGACATCGAAGATGATAAGAAACGCCGTCGGCTGAGTAACTTATTACTCAGCTATAGCGAACGGGTGCAATATTCCGTTTTTGAAATCACTCTGCGCCACGACAAAGCGCTGGACGAATTGAAAAAACGGTGTCAAAAATATGTAGAACCAACCGACAGCCTGCGTTTTTACTGGCTCCCCTATGATGCCAGAAAAGGCTCATTTGACATTCATGGTAACTCAATCGCAACTTTTCCACAGGCTGAAATTCTATAATCAAACTGCTCACGGCTCTTTAACAATTCAGTTCACAAAAACGGTTCACAATCATTGTGTTAAGCAGCGATTTCCGATAACCTGAAAATTCTACTGACATTGTCCTGACAGGTGAATCTGTGGATAACTTGAGGCCATCCAAAACCGCATTGCAAGTGATTGATTTTAAACTTTCATTACGGGGGTGA # Right flank : CGTGGCGGGGTTCAACTGACTGAACCCCGTGATACTGAGCAGCCATCAGATAAAACACACGGCTAAATACACCATCCATCGCAAACCCCGGCACCCGCGAACCAGAGCCCTTGCTATTTGCCACAACCTTTCGTAACTTGACCGCATCATCACACCATCACGAGACATACCGCATGAGAATCTTCTTAGACACAGAATTCACCGGCCTGACCCAACACACCGAATTACTGAGTCTGGCGCTCCTTGATGAGAACGGGCGGGAGTTTTACGCTGAATTTACCGAACGGCATGGTCAAAGCGTTGACCCATGGCTTGAAAAACATGTGATTCGCCACATGCACTGGCTGAATCACCCGGAAAGTCAGCCTGAAGTGATTATCTCAGCCGAGAAAACATGGCTGTTTGCGCCAGCGGCTAACATTGTTGCCGCGCTACGTGAATGGCTGATGGCATATGATCACATCGAAATGTGGGCCGATTGTCCGGCCTATGACTGGGTG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTAGGTCTGGCCGTTTAGGCCGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.10,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 3 21062-21578 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQUH01000002.1 Vibrio gazogenes DSM 21264 = NBRC 103151 strain DSM 21264, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 21062 29 100.0 32 ............................. CGGGTGAGCGTCGAGTTTTCGGAGCTACATCA 21123 29 100.0 32 ............................. TCTTTTGCAATCGCTTCGTTTTGCTCTTTAGT 21184 29 100.0 32 ............................. GTGCAGATCGAGAACCTGCCATTTCAGGAAAT 21245 29 100.0 32 ............................. GCCCAATTAAACATCACCCGACCACTGAACCC 21306 29 100.0 32 ............................. CAATCCGGCCTTTCGTGATCAGACCTCCACCC 21367 29 100.0 32 ............................. ATTTTGAATACTTCATTGAGTGCAATGTTGAT 21428 29 100.0 32 ............................. AACTCCGCAGACACATCCACAGACACGTCCTT 21489 29 100.0 32 ............................. ATTTTTCAAGAATAACCCCATCAATCTTTTTT 21550 29 96.6 0 .......................T..... | ========== ====== ====== ====== ============================= ================================ ================== 9 29 99.6 32 GTGTTCCCCGTATGCACGGGGATGAACCG # Left flank : TAACGCTGAGTTGGGTCGTGTCGAGGATCGTATTATAAATATTGACGGCCTCGACCTTAAGAAAGCAAGGTTGCTCCATAGATGCACACTCCGTGTCTAATCAACTGAGAGTTATTCATCTTATGTCGTATTTTGCGGGTTTCATATATTCCGACAGTGAAATTATGGTTGTTTGCTGACACTGATTTAACAAAACCTGAATGATTTCACATTTCTGAGAGAGAATATTTATGTGATTTTCGTTCCATAAATGAGACTGATTCACCTACGATATTCAGTTTCCCCGTGTTCGGCTTCGGTACATTGCCCGCAATGTGTTTGTTTTATGAGATAAGGATTGGCAATGAAAATAGCCTGTAGAGATCACCTTTTGGGTGGGAGGCTCTTTACGCAAGGAGATGCCCGTTAGAAGATATCAATGTCTGGGTTCAAAGACAGAAAATGTTGGTAGATTGTTAACGACGATTTTTCTTTTTATAGATCAATCATCTATATTTAGA # Right flank : GAACAGGTTTGTCGGGGGAGGATCGGGGCTGAGCGCCCCTGAGGGCTGTATCTTTACTTTGATTTTACCAGTCTCCGGCTCCGAAATTTGACGCACAATTGCGTTCCTCAATTTCAGAAACATCGGTGCTCTGTGCGCCAGTTACTCTTGCCAAGATGCAAGAGTAACCAGAAGATCTTTTTTGTTTGGCTTGGTTACACGTTGTCCAGAACCAGCTTTTACGGGCGTCCTGCCCGGAAAAGCCTAACCATTCTTCCTTGAATGGTTTTCTTGGTTGGGTGGTTAATTAGAGTTGAGAGGAACATTTTTAAAGCTAACTTGATCGATGATCTCAGGGTAAAATTCAGGGACGAATTTTAAGCTTTTCGTGAGCAGGAGCGAATAAAAGCGTCCCTGATTACGTGTGCTGAACAAAAGTCTCTGGGGCGCTGTCGAAGATGCCATTGAAATTGATGAATATTATTGCGTCCCAAATCACGGCGCCTCAACTTTTAATCCTC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTATGCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTATGCACGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 235037-235543 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQUH01000002.1 Vibrio gazogenes DSM 21264 = NBRC 103151 strain DSM 21264, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================= ================== 235037 35 100.0 32 ................................... AAAATGGCTTGTCTCATGTTTAATTTGTTTGA 235104 35 100.0 33 ................................... CTTAGTTTTTCCCCAACCTGATGAGTAATAACT 235172 35 100.0 32 ................................... TTTTGAGTACATCCTCAAGACGGTTGTACTCA 235239 35 100.0 32 ................................... TTTACCTGGATATACCCGGCTTCAAAATCCAC 235306 35 100.0 33 ................................... GATGTATCTGTTGCAGAAACAAGGATGTAACAA 235374 35 100.0 33 ................................... GTATTGGGTATAGATTGAGGTAAGAACTGGTTG 235442 35 100.0 33 ................................... GTATTGGGTATAGATTGAGGTAAGAACTGGTTG 235510 34 91.4 0 ............................-A...G. | ========== ====== ====== ====== =================================== ================================= ================== 8 35 98.9 33 GTGGAAATACCTTGGCCGAAACAGGCCGTTAAGAC # Left flank : TTTAGTGTATTGAGAAGAGGTTTATATTTATACAAGCTATTTAAAATCAAATGGTTAAATTGACATTAAAAGTTGGCACGTATACTGCAATAATGACAGTGACCCTTATTAAGCCGAGGGTCACCTAGCCAACTGACGTTGTTAGTGAACCTATTTTGTTCATATTGATAGCCAATCACAATTTTGTGGTTGGCTTTTTTTGTTGATAAAAATCGATAGTGAGGTGGTTCTTTTCATTTTTTAGGCGTGAGTCATGCTACAAAGAGAACATCTGGTTATCGAACAAGGTTATTCGGTTGCAGCTGCAAAGTGGTTTTGTGATCATCTTACTTTATCCGTCGGGGGATTCGATGCTATGATCACTTGTCCACATGGGATTTGGTCAATTGGCTGAACCTGACTGAAATCGATTGGAAATGGGGATTTTGATATGTATAAACGTACAGATGCGCCAAATCATCGTTTTCAGGCCTTGTCTGATGGGGGTTGCAGTGAGTGCT # Right flank : CTGCCATATTGCATGGCAGCCTTTCGTATTTCTGAAAGAATAAAAGCGGGCTTACCCGCGGTTAGCAGATAATAATGGCGTTCGGCCAGTCGGCGATCCGGCCTTCTCCGATGACGTGAGATTGTTCCCGACAGTTGGCGCACAGACGATAAAAGCGCAGTTTGTCCGATTCTTCCAGCAGTGGACGGAGCTGTCCGATGAGCTGATGGAGTTGATAGGGTGTTTTGACGGCGATTTCAAATACCGATTCCTGAACCCGATCACCGTAGCCCAGCAAAATTTTGCCAACATTGCGGCGGATCCGGTCATCACTGATATCAAAACAGACCGCGTAAATAATTATCGGCTGTGCCATGCCTGAAATGTCTCCCCGGTACGAATGGTTGTGATCAGACTGTGAATCTGTTTGTGTAACTGTTCAAACAGCGAATCAGCCTGTGATGATATGGTTTTTGTCTGATAAGTCAGTTCATGTAACAGTGCTGACAGATAGCGCTGGC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGAAATACCTTGGCCGAAACAGGCCGTTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.40,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //