Array 1 1684-2764 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QNNJ01001152.1 Xanthomonas oryzae pv. oryzae strain OS166 scaffold1152, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	===============================	====================================	==================
      1684	    31	 100.0	    34	...............................	CGTTGAACTATACAAGCATCAGCGTTTAGCGCGG  	
      1749	    31	 100.0	    35	...............................	AAGAACAAGACCGCTGCCCTCGCCGCAGTTGGCTC 	
      1815	    31	 100.0	    35	...............................	CGCCAATGAAAACCTGCATCTGCTTCCTCACGACT 	
      1881	    31	 100.0	    35	...............................	AGCAGTACCAGACGCAGTTGCAGCAGTACGAAAAC 	
      1947	    31	 100.0	    34	...............................	ACAAGAGCGCAGGCGCGGGACGCCGGCGCATTTC  	
      2012	    31	 100.0	    35	...............................	ACCCGACTCGGCACACCATCCACACGCCGTTCAAC 	
      2078	    31	 100.0	    35	...............................	GGAGGTATGTGTGGGGGTTTGGCTCCGATATCATC 	
      2144	    31	 100.0	    34	...............................	TACCGCGAACACCCGGAAGCACAGGTCATTACAG  	
      2209	    31	 100.0	    35	...............................	CCGACCTCAAGGCGCGTTCCTCCGGTTCGATCCAA 	
      2275	    31	 100.0	    33	...............................	ATGGGTAGTAACGTATCCACGGCCCGTGAAGCG   	
      2339	    31	 100.0	    36	...............................	ACGTAGAACGAGCGCTTGTTATAGCGCTCGCGCCAC	
      2406	    31	 100.0	    34	...............................	CTGCACATACTCAATCAGGGCGCTGTCGGTGCGA  	
      2471	    31	 100.0	    35	...............................	TTTGCGACGGTGTTCAACGGCGAGCAGATTGACGG 	
      2537	    31	 100.0	    34	...............................	ACCGCATCCCGGAAGACCCACAATGTTGTCCGCC  	
      2602	    31	 100.0	    36	...............................	GCCCGACGGGTATGAGCAAGTCTTTGCTGGGATACC	
      2669	    31	 100.0	    34	...............................	CGCGACGGGCTGGAGCTGGTAACCCCGTCGCAGA  	
      2734	    31	 100.0	     0	...............................	|                                   	
==========	======	======	======	===============================	====================================	==================
        17	    31	 100.0	    35	GTCGCGTCCTCACGGGCGCGTGGATTGAAAC	                                    	       

# Left flank :   GGAAGTAAGAGGACGCCCGCGCATGATGGTCTTGATCAGCTACGATGTCAGCACCAGCTCCCCGGGCGGCGAGAAACGCCTGCGCAAGGTCGCCAAAGCTTGCAGGGACCTTGGTCAGCGTGTCCAGTACTCGGTCTTCGAGGTTGAAGTGGAACCGGCGCAATGGGCCGAGCTTAGGCAACGCCTATGTGATCTGATTGATCCCAGCGTCGACAGCCTGCGCTTCTACCACCTCGGCGCAAAGTGGGAAGCCCGCGTAGAGCACGTCGGTGCCAAGCCAAGCCTGGACTTCAAGGGTCCGCTGATCTTCTGACGCGAACCCCAAGCGACTTGCGAAAGCCGGGCAGGCTCGCGAAATTTCCAAGTGATTGATTTTAAAATAAAATAACTTCACTTGCCATCGCGGGTGCTCATATTTGCAAGGCATGGAACCTGTTCGCGTTCCTGTTCGCGAAATGACGGGTTTTCCCTCAAGACGCGCAAGCACTTATGCTGGCGGC
# Right flank :  CATGACGCGTCAGCATTACTCATAAGTCAGAAATATAGGCGACACTTGGATGCGTGAAGAACGAGCGCACCAATTCTGGTCGAGCTGCAATGTCGGACAACTGATCATGCACCCGATCGGCCAGCTTCTCGCCACTGCGCAGCGGGCTGCGCGCTACGCCCGTGCGCTTGGTGTAGCTCCACACCAACTCGTCGGGATTCAAGTCCGGCGCGTCACCCGGCAGGAAATGCAGCGTCAGCCTGCCCTTCAGGCTGTCCACGTCATCGCGCAAGCCACGGGTCTTGTGGGCAGGCAAACCATCACCTGATTAGCACGATCTTTCAGCACAGTCGCAGCCAGTGAGAGCCGACCGGTCGATGGTAGGACCGTCGCTCCACCGAGACCAGATCATGGCCATGAATCGTGTGCAGTTCCAAGCCGGGCTGTCGTTGCCGGCGTTCCTCAAGTGGTGCCCAGCTTGCTGGCCGCCGCAGCCGCCAGCAAGCCGTGGTCCGAGCGGG

# Questionable array : NO	 Score: 9.26
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [5,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-5.30,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [43.3-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.37,0.64   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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