Array 1 116888-114697 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPCH01000013.1 Campylobacter concisus strain AAUH-10UCil-a 1096812, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 116887 30 100.0 34 .............................. ATTGTAAAAGGCTTAAAATCATTTGAATTCTTTG 116823 30 100.0 38 .............................. TACCAGTTACATCAGTAGCTAGATCAAGCCTTAGCACG 116755 30 100.0 34 .............................. GAAATCTCAGAAATTGTAGGAAGTTCAACAATAG 116691 30 100.0 35 .............................. TATAGAGAACAGCAGTTGCATAAGAAAGGATTAAA 116626 30 100.0 34 .............................. TTTTAATATTGCTGTTTGTAAGGCTTCCAAAATA 116562 30 100.0 35 .............................. TATGTAGAAAACGAAAATTTTTCTAGCTACCTTTG 116497 30 100.0 35 .............................. AACAGCTCGTCGCAAATTTTTAAAATTTGCCTTTG 116432 30 100.0 34 .............................. AACTCTTTCTTTGGTGCTGTGATCGTTTTCTTTG 116368 30 100.0 37 .............................. TAAAGTCCAAAACGAGTGCGACCATTTTTAAGCTTGC 116301 30 100.0 34 .............................. CCATTGTTTAGCCTTTATAGTTTCTTTAGCTTTT 116237 30 100.0 36 .............................. AGATCATAAACCAAACAAATATTGAAAAGAAGTAAT 116171 30 100.0 36 .............................. GGAAAGTGGCAACGCTTGATGATGAGGCTTTGCGTC 116105 30 100.0 36 .............................. ATCGTGATAAGTCTGAAAAGCAGTTTGTCAGCTTCC 116039 30 100.0 35 .............................. AGGTCGCTGAAAACTCTGCTAAGCTTGTTGATAGC 115974 30 100.0 33 .............................. TAATCAATAGGCTTAAATTTAGAATAATCGCCA 115911 30 100.0 37 .............................. AGCTCTTTCTTTGAAACAATGGGAGTTAGAGATGAAC 115844 30 100.0 39 .............................. GAAATTGTTAAATCATCTACACCTGAATATTCTAAAATT 115775 30 100.0 35 .............................. TAAGCACTCCATAATGCGCCACCAGTCCCTAAAGC 115710 30 100.0 35 .............................. AAAATGGGGCGTGAAATCGACTGGGACGATATAGA 115645 30 93.3 35 ....A...............G......... TAAGAGCCAGAATATTCATACCTACGAGTAAAAGT 115580 30 96.7 36 ....A......................... GGATCATAGGAAAAGTAATAAAAAGCATAATTTAAA 115514 30 96.7 36 ....A......................... AGACGATAAGCGAAGTATTGAGAGAGAAAGGCGTTG 115448 30 96.7 35 ....A......................... GCGAGCAAATCGCTAAAGAAAAGATCAAAGAGGCG 115383 30 96.7 36 ....A......................... AGTAAGGTTTAATGGCTATGGACAAAAAAGAAATTG 115317 30 96.7 36 ....A......................... AGAGCCTATAACGATGCACTTTTTAGGGTTGATGAA 115251 30 96.7 34 ....A......................... CTACAAGTGGGCTGGCTTTGCAGCAGGAGCTAAA 115187 30 96.7 35 ....A......................... TGCTTATGAAGATGACGTAAGTGAAGAACTACTAA 115122 30 96.7 36 ....A......................... TTTATGTCTGCTTTGTGCGCTATTCGTTTTAATGAG 115056 30 93.3 36 ....A.........A............... GGAGTTAGGTCTTGCAGCATAATACGCTCGATAGGT 114990 30 93.3 37 ....A................A........ AAAGATATAAAAGATTTAGGTACAAATTTGCAGGGCT 114923 30 93.3 36 ....A................A........ TCTCTACTTGGGGCGATGATAAATTTAAGGCTCTTA 114857 30 96.7 36 ....A......................... AAGCCACAAAAGTGACGACATAACTATCGCCCCACC 114791 30 100.0 35 .............................. TGGCTCTAGTGTTGGTGGTTCTTTTGGTGGCTTGC 114726 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 34 30 98.3 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : AGCTAGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCGCTAAGCCTACATCTCGATCTTGCGGAGATTTTTAAGCCGATCTTGGGCGATACGCTGATTTTTAACATGCTAAATAAAAAAGAGATCACCGCAAAGGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAACAAACAAGCTCAAAAAGTGCATCTGTGAGGACGCGCCTTATGAAGGATTTAAGTGGGAGTGAAATCGCATTTTAATAAAGCGTTTTTTAATATTTTAAAAAGCTTGAAATTTGGGGCTTGGCGTATTTGCACATGGCTAAATTTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCACTAGAATGCCTATAAAATAGGCTTTTTGGTGCT # Right flank : CCACCAAACATTATTGGCGACAACCGCAATCACTCTTTTGATAGTCGTTTTTTCGGGGCAGTTCCATATAAATTTTTAGTTGGTAAAGTCAGATGGCAGTTATTTTGACACAAACTAGCAAAAAACCTTAACTAATGATTAAAATGAAGCAAATTATCAGATCAATGAAATTTGAAGAAAGTTGTGATAATTTTTGTCAATTATAATTAAAACAAAAAATATATGAATTTATAAAACCCACTTGTAAAGACAAGTGGGTTTTAAAATGTTTTATTTCTCTAGTTTTTCTTTAAGTTTTTCTTTTTTAGATTTAGCTTTTGAAGCAGCTTTTTCTTTCTTTTCTTTTACCTTGTCAATAACTTTGTCTTTTTCGTCTTTTGCTTTTTCACCCATACTAGTTTCATCTTCTTTGCTAGAAGTTAGCTCTTCTTTAGTTTTAGAAGCTTTCTTTTTAAATTTATCTTTTTTATCAGAGATTTTATCTTTCATCTCGTCTTTTG # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : ATTAAAATTTACTCCGTTGGAGTTTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //