Array 1 116889-114698 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPBZ01000045.1 Campylobacter concisus strain AAUH-10UCf2 1098553, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 116888 30 100.0 34 .............................. ATTGTAAAAGGCTTAAAATCATTTGAATTCTTTG 116824 30 100.0 38 .............................. TACCAGTTACATCAGTAGCTAGATCAAGCCTTAGCACG 116756 30 100.0 34 .............................. GAAATCTCAGAAATTGTAGGAAGTTCAACAATAG 116692 30 100.0 35 .............................. TATAGAGAACAGCAGTTGCATAAGAAAGGATTAAA 116627 30 100.0 34 .............................. TTTTAATATTGCTGTTTGTAAGGCTTCCAAAATA 116563 30 100.0 35 .............................. TATGTAGAAAACGAAAATTTTTCTAGCTACCTTTG 116498 30 100.0 35 .............................. AACAGCTCGTCGCAAATTTTTAAAATTTGCCTTTG 116433 30 100.0 34 .............................. AACTCTTTCTTTGGTGCTGTGATCGTTTTCTTTG 116369 30 100.0 37 .............................. TAAAGTCCAAAACGAGTGCGACCATTTTTAAGCTTGC 116302 30 100.0 34 .............................. CCATTGTTTAGCCTTTATAGTTTCTTTAGCTTTT 116238 30 100.0 36 .............................. AGATCATAAACCAAACAAATATTGAAAAGAAGTAAT 116172 30 100.0 36 .............................. GGAAAGTGGCAACGCTTGATGATGAGGCTTTGCGTC 116106 30 100.0 36 .............................. ATCGTGATAAGTCTGAAAAGCAGTTTGTCAGCTTCC 116040 30 100.0 35 .............................. AGGTCGCTGAAAACTCTGCTAAGCTTGTTGATAGC 115975 30 100.0 33 .............................. TAATCAATAGGCTTAAATTTAGAATAATCGCCA 115912 30 100.0 37 .............................. AGCTCTTTCTTTGAAACAATGGGAGTTAGAGATGAAC 115845 30 100.0 39 .............................. GAAATTGTTAAATCATCTACACCTGAATATTCTAAAATT 115776 30 100.0 35 .............................. TAAGCACTCCATAATGCGCCACCAGTCCCTAAAGC 115711 30 100.0 35 .............................. AAAATGGGGCGTGAAATCGACTGGGACGATATAGA 115646 30 93.3 35 ....A...............G......... TAAGAGCCAGAATATTCATACCTACGAGTAAAAGT 115581 30 96.7 36 ....A......................... GGATCATAGGAAAAGTAATAAAAAGCATAATTTAAA 115515 30 96.7 36 ....A......................... AGACGATAAGCGAAGTATTGAGAGAGAAAGGCGTTG 115449 30 96.7 35 ....A......................... GCGAGCAAATCGCTAAAGAAAAGATCAAAGAGGCG 115384 30 96.7 36 ....A......................... AGTAAGGTTTAATGGCTATGGACAAAAAAGAAATTG 115318 30 96.7 36 ....A......................... AGAGCCTATAACGATGCACTTTTTAGGGTTGATGAA 115252 30 96.7 34 ....A......................... CTACAAGTGGGCTGGCTTTGCAGCAGGAGCTAAA 115188 30 96.7 35 ....A......................... TGCTTATGAAGATGACGTAAGTGAAGAACTACTAA 115123 30 96.7 36 ....A......................... TTTATGTCTGCTTTGTGCGCTATTCGTTTTAATGAG 115057 30 93.3 36 ....A.........A............... GGAGTTAGGTCTTGCAGCATAATACGCTCGATAGGT 114991 30 93.3 37 ....A................A........ AAAGATATAAAAGATTTAGGTACAAATTTGCAGGGCT 114924 30 93.3 36 ....A................A........ TCTCTACTTGGGGCGATGATAAATTTAAGGCTCTTA 114858 30 96.7 36 ....A......................... AAGCCACAAAAGTGACGACATAACTATCGCCCCACC 114792 30 100.0 35 .............................. TGGCTCTAGTGTTGGTGGTTCTTTTGGTGGCTTGC 114727 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 34 30 98.3 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : AGCTAGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCGCTAAGCCTACATCTCGATCTTGCGGAGATTTTTAAGCCGATCTTGGGCGATACGCTGATTTTTAACATGCTAAATAAAAAAGAGATCACCGCAAAGGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAACAAACAAGCTCAAAAAGTGCATCTGTGAGGACGCGCCTTATGAAGGATTTAAGTGGGAGTGAAATCGCATTTTAATAAAGCGTTTTTTAATATTTTAAAAAGCTTGAAATTTGGGGCTTGGCGTATTTGCACATGGCTAAATTTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCACTAGAATGCCTATAAAATAGGCTTTTTGGTGCT # Right flank : CCACCAAACATTATTGGCGACAACCGCAATCACTCTTTTGATAGTCGTTTTTTCGGGGCAGTTCCATATAAATTTTTAGTTGGTAAAGTCAGATGGCAGTTATTTTGACACAAACTAGCAAAAAACCTTAACTAATGATTAAAATGAAGCAAATTATCAGATCAATGAAATTTGAAGAAAGTTGTGATAATTTTTGTCAATTATAATTAAAACAAAAAATATATGAATTTATAAAACCCACTTGTAAAGACAAGTGGGTTTTAAAATGTTTTATTTCTCTAGTTTTTCTTTAAGTTTTTCTTTTTTAGATTTAGCTTTTGAAGCAGCTTTTTCTTTCTTTTCTTTTACCTTGTCAATAACTTTGTCTTTTTCGTCTTTTGCTTTTTCACCCATACTAGTTTCATCTTCTTTGCTAGAAGTTAGCTCTTCTTTAGTTTTAGAAGCTTTCTTTTTAAATTTATCTTTTTTATCAGAGATTTTATCTTTCATCTCGTCTTTTG # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : ATTAAAATTTACTCCGTTGGAGTTTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //