Array 1 17791-20327 **** Predicted by CRISPRDetect 2.4 *** >NZ_LCUJ01000006.1 Aliarcobacter thereius strain DU22 AAX29_contig000006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 17791 36 100.0 30 .................................... CTACATACTCTTTATTACTAATATCAGATA 17857 36 100.0 30 .................................... TAACAACTCTTATTATTTTAAGTTCTTTTG 17923 36 100.0 29 .................................... CCTTTAAAATTCTAATTGCATCATCACAA 17988 36 100.0 30 .................................... CTACATTGTACAAAAAACAGAATGAGCGAA 18054 36 100.0 30 .................................... TATCAAAGAATTATCTAAAGTTAACAAGAT 18120 36 100.0 29 .................................... ACCTATATTTTATAAATATATCTTTTTAT 18185 36 100.0 30 .................................... AACAAGTTTTTTTGAATCCAACGATAAGAA 18251 36 100.0 29 .................................... TATATATATTTCATACAAAAAGGAATCTC 18316 36 100.0 29 .................................... TATGTCTAACTTCAAAAGGTGGTGCTGGG 18381 36 100.0 30 .................................... CAGGAGCAGTTGAAATAATTACTTCAAGGA 18447 36 100.0 30 .................................... GCAAATGGTATCGTATATGATTTATTACAA 18513 36 100.0 30 .................................... AGAGTTGAGCAAGAATTAGCAAAATAATTC 18579 36 100.0 30 .................................... CCTCAAGATATTTTCCAAAAGTTATCAAAG 18645 36 100.0 30 .................................... ACAAATGGTGGAGATGAAGAAACTGGAAAC 18711 36 100.0 29 .................................... TTGTAGTTTCTGCAATATATTTTCCACAA 18776 36 100.0 30 .................................... CCATATACAGTTGCTGAAGTTGTATTGCTT 18842 36 100.0 30 .................................... AGAGTTTTATCTTGATAATTCACTTATAGA 18908 36 100.0 30 .................................... ACTGGACTCAATGCATCAATGTTTTAAAAT 18974 36 100.0 30 .................................... ATGTTCGACCATCAAGAGCTAAAAAAGATA 19040 36 100.0 30 .................................... ACACTTAGAAGTGGAACAGCTCATCATTGT 19106 36 100.0 30 .................................... TATTAGTTTTGCAGTATCTTCATATAAAAA 19172 36 100.0 29 .................................... TCATAGTTATATTGGAAACCCGACTCGCT 19237 36 100.0 30 .................................... ATAGACAATATCATCTTCGTACCTTGGATT 19303 36 100.0 30 .................................... ATTATAAAATTGAAGATGTAGAGCAAATAA 19369 36 100.0 30 .................................... ACTTTTGGGAACATAAATGATTCCTTTTTT 19435 36 100.0 29 .................................... CTGGTCAAATAGATACTTTTATGGTTGGA 19500 36 100.0 30 .................................... AGAAACTAATCCTGAAAAATCAATCCATTT 19566 36 100.0 30 .................................... TACATATCCAGCTTTATTATCCAAACTTTC 19632 36 100.0 30 .................................... GCTACGAATACTATCAAGCATAGTTTTAAT 19698 36 100.0 30 .................................... TTTGTTCTATTTGTAGTTTCTATTGAGCTA 19764 36 100.0 30 .................................... TGGTTGCCATCTAACTATGGATATGCTGAA 19830 36 100.0 30 .................................... AAACCATTAAAACGATAAATATAATTATAG 19896 36 100.0 30 .................................... TTTATTCTTTAGCTCATATATTTCAAGTCA 19962 36 100.0 30 .................................... GTACGAGTGCAGTTATAACAGCTTATATAC 20028 36 100.0 30 .................................... ACTAAATGCAATGTATACAAGTGTAAAAAT 20094 36 100.0 30 .................................... TAGGATATGAGTCAAATACTAGAATTATCA 20160 36 100.0 29 .................................... GCTTCAATTTATTCAAATATTAAAAATTT 20225 36 100.0 30 .................................... TAAGATGGATAAATTAACGGCAAAATCAAT 20291 36 94.4 0 ...............................T...G | G [20322] ========== ====== ====== ====== ==================================== ============================== ================== 39 36 99.9 30 ATTATATCAAATGGGGATTTGAGAGTAGATTAAAAC # Left flank : TCAACGAGTTCAAATATCATATTGCATGAAACAAATAGTTGCAAACTATCAAAGTATATGTTTGGGTAAAGTTGAAGATTTAAAGCTTTTTAGATTATGAAAAAGCAAAAAAAAGAAGAGATAAGTAGGTATAGAAAAATGGTACTCTTTGCAATGTTTGATATGCCAACAGATACAAAAGGTGATATTAAAAAATATACAAAATTTAGAAAAAAACTTCTAGAGATGGGGTTTATAATGTTTCAATTCTCTATTTATGTGAGATTTTGTAACAGTTTAGAAACAGCACAAAAATATGAGAGAAAAATCAAAGAAATTGCACCAACAAAAGGTTCAATAAGAGTATTAAAAGTAACAGAAGCACAATATAAAAATATGATTATTATAGAAAATTATCGCAAAAAACCTGAAAAAAAAGTAGAAAAACAGACTCAAACAGTGCTTATTTTTTAGTGTAAAAACTTTATAAAACCCTGTATTACAGGGTTTTTGCCTACTCT # Right flank : GAAGCTTTAGTTTCCTAAAGCCTCTTTAATAGCAAAAATTTCATTCATTGTTTTATAAAGTTGATCAATATGAAGCATATTTGGACCATCACTTTTTGCAACTTTTGGGTCAATATGCGTTTCAAAGAAAAATCCATCAACTCCAACACTAGCAGCCGCTCTTGCCATATATGGTACAAAAGAGCTATTTCCCCCAGTTGTTCCACCAGTGCTTGGAATTTGAACACTATGTGTTGCATCAAAAATCACAGGAGCATATTGTTTAAGAAGTAGTAAGTTTCTCATATCTACAACCAAAGCACCATATCCAAAAGTATTTCCTCTTTCACAAAGCCAAACACCAGCTTCTTTACTGCTTTCATAACTTACTTCATTTACTCCTCTTGTGTTTAATACTTTTTCAACAGGATGTTTCATAGCATCAGCTGCTAAAAATTGACCTTTTTTTATATTTATTTTTGCAGGAGTTTTAGCAGCAGCTACAAGTAAATCGGTTTGTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATATCAAATGGGGATTTGAGAGTAGATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.60,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //