Array 1 231-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQGB01001000.1 Blautia producta strain DSM 3507 NODE_1000_length_230_cov_89.258883, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 230 32 97.0 34 -................................ AACATGCATTGGAGCCGCTTTACTTTTTGTTAAT 164 33 100.0 33 ................................. TTTTATGGCCTGCAGCCCGGCAAGCATGGCTTT 98 33 100.0 34 ................................. CGGCATCATATGTGGCATATGACTGTCTGTATAA 31 31 93.9 0 ...............................-- | ========== ====== ====== ====== ================================= ================================== ================== 4 33 97.7 34 GTCACTCTCCGCGAGGAGGGTGTGGATTGAAAT # Left flank : | # Right flank : A # Questionable array : NO Score: 8.75 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCCGCGAGGAGGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCGCAAGGAGGGCGTGGATTGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.30,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 234-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQGB01000998.1 Blautia producta strain DSM 3507 NODE_998_length_233_cov_119.425000, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 233 31 93.9 36 --............................... AAAAGACGGTAATGGACGTTATGAGAAGACCATAAA 166 33 100.0 34 ................................. TCCGCCTGATGACAGATTTACCAAATCAGAGTTG 99 33 100.0 36 ................................. GTCTATGCCATCTGGCATTGTCATAAATCCGTCTGC 30 30 90.9 0 ..............................--- | ========== ====== ====== ====== ================================= ==================================== ================== 4 33 96.2 36 GTCACTCTCCGCGAGGAGGGTGTGGATTGAAAT # Left flank : | # Right flank : A # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCCGCGAGGAGGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCGCAAGGAGGGCGTGGATTGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.70,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 230-2 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQGB01001001.1 Blautia producta strain DSM 3507 NODE_1001_length_229_cov_68.989796, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 229 30 93.8 34 --.............................. ATCCTTTCGACCTCTATTAAGGTGTACCCCGTAT 165 32 100.0 33 ................................ GTATAATTAATACATAAATGCAAACATTTGTTC 100 32 100.0 35 ................................ TCTGTAACAGGAGCATAAGCGCCATCGGCAGAACA 33 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 4 32 98.5 34 GTCACTTCCTTCGCGGAAGTGTGGATTGAAAT # Left flank : | # Right flank : TC # Questionable array : NO Score: 8.79 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTTCCTTCGCGGAAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.40,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : NA // Array 1 229-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQGB01001003.1 Blautia producta strain DSM 3507 NODE_1003_length_228_cov_131.164103, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 228 30 90.9 34 ---.............................. AGCAGAAAGCGCTGTTGAGTAGATACGAAAATCA 164 33 100.0 32 ................................. TTATTTGATAATACTCTGTATACGCAATCTTT 99 33 100.0 35 ................................. AGCGTAACGGAACCGTCAGAGTTTTGAGTGATTTC 31 31 93.9 0 ...............................-- | ========== ====== ====== ====== ================================= =================================== ================== 4 33 96.2 34 GTCACTCTCCGCGAGGAGGGTGTGGATTGAAAT # Left flank : | # Right flank : A # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCCGCGAGGAGGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCTCCGCAAGGAGGGCGTGGATTGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1-228 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQGB01001004.1 Blautia producta strain DSM 3507 NODE_1004_length_228_cov_74.923077, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ========================================= ================== 1 27 100.0 40 ........................... AATTCTATGATGTGGTTTCTGCCAGCAACCTGGAAATCGT 68 27 100.0 41 ........................... AATACACTGCATTGTTTATATCCTGGATCTCGGATCGGCGT 136 27 100.0 39 ........................... AATATTACAAGGAGTAACAAGGCCTTACCAAGGCTGTGT 202 27 100.0 0 ........................... | ========== ====== ====== ====== =========================== ========================================= ================== 4 27 100.0 40 CACTTCCTTCGCGGAAGTGTGGATTGA # Left flank : | # Right flank : | # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CACTTCCTTCGCGGAAGTGTGGATTGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.90,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 13760-13923 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQGB01000047.1 Blautia producta strain DSM 3507 NODE_47_length_21027_cov_89.807659, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 13760 32 100.0 34 ................................ CCCCAAAGCCCGTTGGTCTCTGCGTCAAATGAAA 13826 32 100.0 34 ................................ AGGTTGACGTTAAAGACACCGGCATTGGAACCGT 13892 32 84.4 0 ................CA....A......GT. | ========== ====== ====== ====== ================================ ================================== ================== 3 32 94.8 34 ATCGCTGCCTGCGCGGTGGCGTGGATTGAAAT # Left flank : AAGAATCACCCCGCCCAGAAAAAGAAAGAACAGGTGATTTCTGAGTTCAGGCAGAAAGACCGCAAATGCCACTGCGCCGAAACCATAAGCCGGACAATAGGGACCGAATAAAAAACCTACGTCAATGAACCGATGCTCCCTGACCGCCGCAACCGACGTGCCGATTGCCCAGCCAATGAAAGAATAGAGTAAGTAAAACCATAGAAGTTGGTATAGTGTGTAGTTCAAGTTATGCCTCCTTTTGGGTGATGCCGGATGATAAGGGTTTTAGTATACCATATACGCGGGGGGAAGGGATGTCAAGTATAAGTGTAGAGAGAATTTCCGGTGCGAATTGAGAGGGAGCATGGATTTATCGGGAGATTCGCACTTGTAGTGGGGCTGAAAATGGGAAGAAGGGGTGGTGGGGAGTGAGAGGAATCTGTGGAAATTAATTGTAAATATGAGAATAATATGATATTATATACAAGATGTAGTGAGGATGTTTGTGTATTTTTGCT # Right flank : TAAACCTGACACCCCGGTGCCGATGTTCATATATAATCGCCCCTACGGCGAAATACAATCAAATATCCTACACTACATTAACTAATAATTTGCATTGACATACAACCAAATTTCCCGGCATACATTGTAAAAACAACGTTTCCGGGAGATTTTTCCTTGAAAAGTTATATAGAAGAACGTGCTATATCCATAGCCAACTACATCATTGAAAACAACGCAACAGTCCGCCAGACCGCCAGGGAGTTCAAGGTGAGCAAGAGTACAGTTCACAAGGACGTAACCGAGCGTCTGCTGCAGCTTAATCCTTCACTGGCAAAGTGTGCCCGCAAGGTCCTTGACGTGAACAAGCAGGAGCGTCATATCCGGGGTGGAATGGCTACCCGGGAAAAATATCTGCACAAGGTGCAAAATTAACGAAAGAGACTCTTGTTTTGACAAAAATATGGGCGTATAATTGTTCCTATCAAAATACAAAAGCTTATTGTGAGGGGAAAACAAAT # Questionable array : NO Score: 5.10 # Score Detail : 1:0, 2:0, 3:3, 4:0.74, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCTGCCTGCGCGGTGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.40,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA // Array 1 229-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQGB01001006.1 Blautia producta strain DSM 3507 NODE_1006_length_228_cov_59.697436, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================ ================== 228 33 100.0 32 ................................. TTGTATATCTCGAAGATTTGAGCAAAGGAAAG 163 33 100.0 32 ................................. ATGCGCAGGAAAAACCGCCGGAACAGCTACTG 98 33 97.0 32 T................................ CAGGTCAGGAAGTGAGAATGCGCTTGCCATAC 33 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ================================ ================== 4 33 99.2 32 AGTCACTTCCTTCGCGGAAGTGTGGATTGAAAT # Left flank : | # Right flank : T # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTCACTTCCTTCGCGGAAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.40,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 1-227 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQGB01001007.1 Blautia producta strain DSM 3507 NODE_1007_length_227_cov_98.180412, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 1 31 96.9 33 -............................... CGATCACGCTTTGTGCATGAGTGCTTGCAAACA 65 32 100.0 34 ................................ TATACAATGAATTAGAGATGGAAGGGGGGAGTTG 131 32 100.0 33 ................................ CCGGTTTTTACCATCCACTTTTTTTCTCATCAG 196 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 4 32 99.2 34 GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Left flank : | # Right flank : | # Questionable array : NO Score: 8.82 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.90,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1341-1506 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQGB01000689.1 Blautia producta strain DSM 3507 NODE_689_length_1506_cov_37.189409, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1341 32 100.0 34 ................................ GCGATCATTCCTACGGCTTTTTCAATGGCAAATT 1407 32 100.0 36 ................................ CAAGGTTAATGAGCTCAGTGAGCAAAACAGCAACAA 1475 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 3 32 100.0 36 GTCACTTCCTTCGCGGAAGTGTGGATTGAAAT # Left flank : GTTCCGTTCATCAGGTATTCTATGAATCAGAAAGATGGAAAGTTAAAACTTTCATCCAGGACTGGCTGGATTTTATATGAAGGGGATCTATCTGGTTTTGTGCCAATTTTGGAAGCGGGTAAGTATCTGCGGGTAGGAAAAGGTGCTACCATTGGATTTGGACATTATGATATTTCTTATGATAAATAATGGGGAAATAAAAGGCTGGAAACAGTGGGATTGAGAGGGATTGTGATAAAAATCGGCCTTGAATTTTTTGTAGAAAATGCAGATGATATAATATTTGTTCAGAAGATGATTACTAAGCTTATTTTATAAAGTGCGAATGTGGAGTGAACATAGTTTGCCGGGGAGATTCGCACTTGAAAAAATGGTTAAAAATTGATGATGGAGTGATTTTTTTAAGATATATTTGTAGGAAAGGTTGCATTATTAATCAAAAAGGGTTAAAATTTGGTAGAAAGAAACAATATTTATTGGGAATATTGTGCATGTTTGCT # Right flank : | # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTTCCTTCGCGGAAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 1 1-233 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQGB01000832.1 Blautia producta strain DSM 3507 NODE_832_length_734_cov_82.409415, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 1 31 93.9 34 --............................... AGAGCATCTAATCGTGCTTTTATATCCACAGTAT 66 33 100.0 35 ................................. GTGTAACCGGTATTACATACCTTTTTCCCCTCACG 134 33 97.0 34 ........................A........ TCATCCTTTTGTACATTGCTCCGTTTGGCTCTGT 201 33 84.8 0 ...............A.......AA.C.....C | ========== ====== ====== ====== ================================= =================================== ================== 4 33 93.9 35 GTCACTCTCCGCGAGGAGGGTGTGGATTGAAAT # Left flank : | # Right flank : CAGCAATAAAACCAAATACCCAAAAAAGGAAAAATCCACTCTTTACAAATCAAGTGCAGAATAGAGCCATTTATATCAGCGCTGCATTTGGAGATACCGTAGTTGTTCACAAACAACCAATCTCCCGATTACGCAAATCCCCTTGACCATCATGACAAAACCCATTGACACCAGCAAAAAATCTAACTATAATAATGGCACAGTAACCCGGTAATTTACCTACAGCGTTGGTCGTTGGGCTGGCGCTGTTTTGTTATGCAGGATTTATTCTTGGATTTGGGAGAATATAACTGTCGGAGGATGAACATGGCAACAATCAAGGAAATTGCAAAGGCATGTAACGTCTCAATCTCAACGGTTTCTAATATACTAAATGGCAAGGAAAAGGCCAGACAGGAGACAAAGGAACTGGTTTTGCAGAAAGCAAAAGAGATGAATTACGTGCCAAATTATATGGCAAAAAATCTGAAACAAAAAAATACCAAACCAATCGGAATCAT # Questionable array : NO Score: 6.75 # Score Detail : 1:0, 2:3, 3:3, 4:0.70, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCCGCGAGGAGGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCTCCGCAAGGAGGGCGTGGATTGAAAC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.40,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 3-361 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQGB01000742.1 Blautia producta strain DSM 3507 NODE_742_length_1174_cov_44.872042, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 3 32 96.9 33 .........T...................... TATATAGATGACAGGAGAAAAGCGATGAACGAA 68 32 100.0 34 ................................ ACAACGTATGAGACAGGTTTTATATTTCAGTCTG 134 32 100.0 34 ................................ CTGATAAATCCGGTTCAGTTTAAATGCAATATTT 200 32 100.0 33 ................................ AAAGCTGTTGTCCCCTCTGCTTGTGCATGTATA 265 32 93.8 33 .........T.............A........ ATGCAACATCTGCTTCTACTCTTGGACAATTAA 330 32 78.1 0 .........T...A..C.A..CA...A..... | ========== ====== ====== ====== ================================ ================================== ================== 6 32 94.8 34 GTCTCCGGCATCGCGCTGGAGTGGATTGAAAT # Left flank : CAG # Right flank : TGCTTGTAGGAATACAACCACAGTTTTGGGTATTGTCTTTAGCTTCACACCGAAGACAGTCACAATAGTATTAACACTAAATACACCGGACAAAATTCGTACCTTGAAATTAACGTCCACTTAAATTAGAATCAAAACAAGATCACCTACCATTTATTCAACATTTTATATTTACGTTTAATAAAGACATAAAGATAATAATCAGCACTGCAAATTCAAATTTTTATCGCATTTATGCATAAAAATCATCTTGCAAATGATTCCCCAACAATAATACATCCCAGGAGATTTACATGAGAAAGCGTTATAACGTGACCGGAATCTGTATACCAGAGAAACATTATATGGTAGACATATCACAAAAAGTAAAACAAATTGTAGAAGAATACATTGAACCAGGGTATTATTTTGCAATTAACAGAGGCAGGCAATACGGGAAAACCACAACGCTGTATCAGTTAGAAAAATATTTGCAGGATCAGTACATGATTATCAGTATC # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:0, 3:3, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGGCATCGCGCTGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.10,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : NA // Array 1 1-292 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQGB01000961.1 Blautia producta strain DSM 3507 NODE_961_length_292_cov_84.077220, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 1 28 100.0 37 ............................ ATATTCCGGAGGCGCTCTCGCTCTGGCGAACAGTCGT 66 28 100.0 39 ............................ ATTTTCCAACCCGGTTTATTGTGCAAATGAGCTGGAGGT 133 28 100.0 38 ............................ ATATCATATTACAGTGCCTTCTTGCCGATGTCGGTGGT 199 28 100.0 38 ............................ ATTATCAATGGAAGCAGGGAAAAGCTACAACAAAGGGT 265 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ======================================= ================== 5 28 100.0 38 CACTTCCTTCGCGGAAGTGTGGATTGAA # Left flank : | # Right flank : | # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CACTTCCTTCGCGGAAGTGTGGATTGAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //