Array 1 920168-922087 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134504.1 Corynebacterium matruchotii strain NCTC10206 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 920168 29 100.0 32 ............................. AGGCCATGGAGGTAGTCGAGGGCGCCGCCGGT 920229 29 96.6 32 ............C................ CCCCCACATCATACGAATGGTTGGATAGTTTC 920290 29 100.0 32 ............................. CAGGTTCACCCCACAAACATTCTCATGATGTT 920351 29 100.0 32 ............................. GCAGCCCGACCAAACCGCGACTGCCGAGGCAT 920412 29 100.0 32 ............................. CCGTCAAGGGTTTCGGCCCTGAGCGCGGTCCA 920473 29 100.0 32 ............................. TAAACAGTGCTTTGAGGCTGCTGGGGTGCGGG 920534 29 100.0 32 ............................. CTGCGAATTCATCTTTGGCGGTGATGTCAAGG 920595 29 100.0 32 ............................. CCGTCAAGGGTTTCGGCCCTGAGCGCGGTCCA 920656 29 100.0 32 ............................. CACCCGTACGCAATATACCAGCCCGGCTTATG 920717 29 100.0 32 ............................. ATTAAAGGTTTGACTAAGCCTGAACTTATCGC 920778 29 100.0 32 ............................. CAGCGTTTTTAACATCGGCAGCGTTTGGTACG 920839 29 100.0 32 ............................. ACCACCACTGGCCGCGGTTGTGGCGAACGACA 920900 29 100.0 32 ............................. TTCCTTCCGCGTCTTCTGAACCGTGTCGTGGG 920961 29 100.0 32 ............................. TAACACTTACCTGGGCCTTTTTGCTAATCAAG 921022 29 100.0 32 ............................. TGGCGAAGCGCCAACCGCAAATCCCGGATCGT 921083 29 100.0 32 ............................. AAGACCTTGCATTCATGGGTGTTGACTATCGT 921144 29 100.0 32 ............................. TCACCACGCCACTTGTCGAACCTCGCGCCTGG 921205 29 100.0 32 ............................. CAGGCGAAGGCCGCTGAGCTGCTGAAACTGTC 921266 29 100.0 32 ............................. GCTGAAAGCCACACTGGATCAGGATTTGGGCT 921327 29 100.0 32 ............................. GTGCCGTCATCGCCGCCACCGAAGACACCGCC 921388 29 100.0 32 ............................. CAGTGGGACCGTGGGAATATTGTCGAGCTGGA 921449 29 100.0 32 ............................. GGGTGATTGACGAAAAAATCGCCATCATGCTC 921510 29 100.0 32 ............................. GTGCCGTCATCGCCGCCACCGAAGACACCGCC 921571 29 100.0 32 ............................. CAGTGGGACCGTGGGAATATTGTCGAGCTGGA 921632 29 100.0 32 ............................. GGGTGATTGACGAAAAAATCGCCATCATGCTC 921693 29 100.0 32 ............................. CACACCGGCCAGGCACCAGGATGCCACACCAG 921754 29 100.0 32 ............................. AGCATTCCGATTTTCTTCTCTCGGGCCTCGGC 921815 29 96.6 32 ............C................ AATCCTGAAACCACATTTTTCCCCCTGAACGA 921876 29 100.0 32 ............................. AAACCATCGAGGGCATCGAGACCTCCCACCAG 921937 29 100.0 32 ............................. TGGGATGGTGCTGAAGATTTCAGTGATGATTT 921998 29 96.6 32 .C........................... TGGGATACGGCTTGGCATACTGGGAATGCCGC 922059 29 79.3 0 ......C....AC.......A.C....T. | ========== ====== ====== ====== ============================= ================================ ================== 32 29 99.0 32 GTATTCTCCGCGTACGCGGAGGTAGTTCC # Left flank : GCCGTGGAGGGAGCGGCGACGCCGCATTGAAGCGAGTGGTGCTGCGCGGGGATGCTTGTACGGAAACGTTGATTCGCTCAACGTATAAAGGTCCGGCACACTGATAGCTTAATGAAGGTATAACTGTTGCGGCCTCAACCGAACGCAGCCCGAAACCTCACCTGGAGCCTAAAAACCGAAGAAGCGTGGGCAGGTTTTGAAGGCCCTGGGGCAGGGCTCAAGCCAGCCCGCTTGATGCTGATACCGATTTCGACGATGCTAGCCATCGGCGGATCAAACACCATCAAGCACCCTGCCCCGACTCAAGAAGTATTACGTATGAGAGGGAGTTAGCGGAAAAGCGTGGGAGGAGGGAGTGTGGGCAGGAATAAGGATCATAGGGCGTAGAGGATTGTCAGTAGCAGAATTTTTACCCCATAATTCGGCCATAAATCCCAGATTCCAGAGCGAATTTTGGCCCATTTTTGAGAATCATGCTATAAAAGGCCCAGCTCATTCAG # Right flank : CGCTACCACGGTGGATTGGCGATTGACGGATACCATCCAACCATTTGATAAAATATAGCTAATTTATTGGAAGGTATTTTACGTTGATCGGTAAACAGGCTGCATACAGTGTCTTTCGTGAAGAAGCAAATAAGATAGTAAAGAAGGGCACACCACATGCAAGCGCTGAAGGTATGGAAAACTCCGAGTATTTTTTCACCCCTATCGCTGCGGTAGAGGCATTTGATGGGGATGAACGCTTCCTGAATCCTGAAGGTACACCTTTGACGTTAATCCGCAAAAGCACCGGAGAGGTAGTTCACTTACACTTCCAAACTGATGAGTGGGGAAAGATTGTGGAAACCATGACTCCTGTTAACTACATAACAGCGTAATGTATTCTCCTCACACGCGGAAGTAATTCCATCAAGAGTCATCCTTATCTCATGCAAAAACTCGCGTGCCCCTATACGGCGCATGCGGGTTAAAAAATTGGTTTAGCACTCAAACGAAGCAGGCAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCGCGTACGCGGAGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 927146-932420 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134504.1 Corynebacterium matruchotii strain NCTC10206 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 927146 29 100.0 32 ............................. CCCCGATGATGGGCATGGTATTAATGCTGTCA 927207 29 100.0 32 ............................. ATCATCAACGAGCTGGGTTTCGTTGGCGATGA 927268 29 100.0 32 ............................. ATTTTTAGCATTGAGGTGGAAAACAGCCAAGA 927329 29 100.0 32 ............................. TAATCGCTTTTGAGGTGGCTTTATCGCTGGTG 927390 29 100.0 32 ............................. GAGTACACGGGTAGTGGGGTTGCTGGACCCAA 927451 29 100.0 32 ............................. CTCATCGGCGCTATATGCGGTTTTATCCGAAG 927512 29 96.6 32 ............................T GTGCGCTGGTTCGGCAAGATTAAAATGGCGAA 927573 29 100.0 32 ............................. ATGCTCGACACCTACCACCGCATCGTGGCCGC 927634 29 100.0 32 ............................. CCCAAACCCCCACTCTCCCATATGAACAATCC 927695 29 100.0 32 ............................. CGTGCCGCCGTCATGGGTGGTGTTCCCGCAGT 927756 29 100.0 32 ............................. AAGGATTTAGCCCCCGCACCCATGAGCTTATT 927817 29 100.0 32 ............................. GGCGAAGCATGGGGCACCCTCAAATGGTTCAG 927878 29 100.0 32 ............................. CAAAGAGGTAACAAACTATCTCCCTTACAACA 927939 29 100.0 32 ............................. TCTTTGATCGCCTTCTTGCCCTCGATGGTGGT 928000 29 100.0 32 ............................. GTATTTTGAGCAATTGATTGGTGAGGTCATTG 928061 29 100.0 32 ............................. CCCCATCCCCCTGCCACTCGGGAGCAGCCCAC 928122 29 100.0 32 ............................. GAAGCCGGATGCGGGGACCCAACCTACATGGT 928183 29 100.0 32 ............................. AACCCAAGTTGAGCGGCTTTGAGCACCCCCAT 928244 29 100.0 32 ............................. GGCTTGGATCGTACCCGGTCTAGGTTTTGGTC 928305 29 100.0 32 ............................. AAGCAGGTCAGGGGGTGCAGTGGCGGCAGTCA 928366 29 100.0 32 ............................. GATGACGAGTCATTCCTGTTTCTTGATATTGG 928427 29 100.0 32 ............................. CTGCATCTTTGTAGTCGTATGCGGTCTTTTGT 928488 29 100.0 32 ............................. GAGGATGCCGTGAACATGGAGACTTACCGGTA 928549 29 100.0 32 ............................. CCGGAAAAGGAAATCGCCTTCGTCGTAGAAGC 928610 29 100.0 32 ............................. TCCTCGTTTTCATCACCCACAATCCAAATGAA 928671 29 100.0 32 ............................. GATCGCATCGCGCCGCGGCCCTTATTGTGGAG 928732 29 100.0 32 ............................. CGAACTGTGGTTGCCGGGCGATGAACAGCCCG 928793 29 100.0 32 ............................. GATAAGCTTATTGATAGCCTGGCGGAAACGGG 928854 29 100.0 32 ............................. GCGCGCTGTAGGTTGCATTGTAGAACTTGTCT 928915 29 100.0 32 ............................. GTCGCCATGCGCTGCGGTTGTAGGTTGTGGCC 928976 29 100.0 32 ............................. TCGGCCAAAGCTGGTCATGGCGGGGTCGCCGA 929037 29 100.0 32 ............................. AACCACGCTCGATAACGAAAACGCATCACTGG 929098 29 100.0 32 ............................. GCCATGGCCACAGCCTACAACCGCTCCGCTTG 929159 29 100.0 32 ............................. AAAAAGGAACGGCATAGGGAACGGTGTGGCCA 929220 29 100.0 32 ............................. TAGCCGAGGCATGGTATCGGCATGTGACCCAG 929281 29 100.0 32 ............................. TAGGGTTTACCAGGATTGACCCTATGCTACCC 929342 29 100.0 32 ............................. CGTTTAGCCGCGTCTATCAGGGTTTCCTCAGA 929403 29 100.0 32 ............................. CAGCGAACATCACCCGCATCAATAAGCAGCAT 929464 29 100.0 32 ............................. AAATTATCCCACACGATGCGTACACCCAGGCG 929525 29 100.0 32 ............................. GCGGTTAATGGTGTTGCGCGGGTTCGGCGGTG 929586 29 100.0 32 ............................. TGCCACGCGAACACTATGTTCTTTTTCCGTGA 929647 29 100.0 32 ............................. GATTGCCCACCAGCTACACTATTCGAGGTTTA 929708 29 100.0 32 ............................. AAGAAGCTGATGAGGCAGCATGCGGTATGGTA 929769 29 100.0 32 ............................. GCGGTCACATACCCCCAATCGAGGAAGTTTCC 929830 29 100.0 32 ............................. ATGACCGGTCGCCCATGTCACCCCACCCTGAA 929891 29 100.0 32 ............................. AAGCTGGGGCCGATGCCATGATTTTCAATCAG 929952 29 100.0 32 ............................. AAGCTGGTGAGCGTGCCGGGCGTGAGTTCGCC 930013 29 100.0 32 ............................. AGGGGGTAGGTGCCTATAAATTTTTCGGGCGT 930074 29 100.0 32 ............................. ATTATCGGGGATGCTATCAGTAAAGGCTGGGA 930135 29 100.0 32 ............................. ATGCTCGATACCACGGAAATTATACCGCTGGT 930196 29 100.0 32 ............................. TCGTTGATTGCCTTCTTGCCCTCGGGTGTGTC 930257 29 100.0 32 ............................. CAAGCCGCCCGGTTTTCGTGATTTAATAACGA 930318 29 96.6 32 A............................ AGTGTGCTGTTAGTCACTTTGGGGTTTGGCGG 930379 29 100.0 32 ............................. GATAGCGTGGCCCCATATGTCCCATAGGTTTA 930440 29 100.0 32 ............................. GAATAGACCCCCCGCCTGATTGGTGGGGGGAT 930501 29 100.0 32 ............................. CCCATTATGCATGAACCCGTGGAGGTAGAAAA 930562 29 100.0 32 ............................. ATTCTTGCGCTCAATCAATGAACCCTACAATT 930623 29 100.0 32 ............................. GCCTGTTGAAGCGGCGCAAATCATGGTTGCCA 930684 29 100.0 32 ............................. GCCCCAGCATGGTTGCGGATATAGAGTGTGTT 930745 29 100.0 32 ............................. ACGCTCACCATGTTGATGTTCACGCCGGTAAG 930806 29 100.0 32 ............................. CAGCCCCTCACCAACTTCTTTATTGAACTCGC 930867 29 100.0 32 ............................. CAGGGATGATATGGTGTTACATGATTTATGGT 930928 29 100.0 32 ............................. CCCACTCTACGCAGCCTCGACCCCACCGCTAT 930989 29 100.0 32 ............................. TGTGCTGTGGTCTGTCCATGGTTTAGCCATGG 931050 29 100.0 32 ............................. GCCGAAATTTTGTTCTCCCAGGCCCGCCAGTA 931111 29 100.0 32 ............................. CCTCAATGCCTGGCAGCTAGATGCACGCTGGG 931172 29 100.0 32 ............................. ATTTTCCAGCGACCGGATGACCTGACCTGCTT 931233 29 96.6 32 ............................T GATATTGGGGTGATGATGCCCCGCCCCTTCCT 931294 29 100.0 32 ............................. TATATACAAGCACCTAGGTGAATCATAAGATA 931355 29 100.0 32 ............................. TCGTTGGCCTGCGGGGTAGGTGTAGACGGCGT 931416 29 100.0 32 ............................. TTACACCCGAACCGGATGAGCAGCCCGGCGGC 931477 29 96.6 32 .....................A....... TCGTGTGACACGCCTCACTAGCGTGGTCGTCC 931538 29 100.0 32 ............................. CAGGTAGTGGTGGAGCAGGTCACTGAAATCAC 931599 29 100.0 32 ............................. ATCGTCAAGACTTGCGAGCACGGCTGCTGCTC 931660 29 100.0 32 ............................. CTCATCGGAGAGGCGTTCGAGGTCGGCCCAGG 931721 29 100.0 32 ............................. GAAAAAACCCCAAGCCGCCCAGGTCACAGATC 931782 29 96.6 32 ...............A............. TGATGGTAAAGCCGAAGTTCAGGTGGAACCCG 931843 29 100.0 32 ............................. AAGCGTGGCGAAATGACCGGTTTCGGCATCAC 931904 29 100.0 32 ............................. CTTGGTGATAGTAAACCCCGCATCCACGGTGC 931965 29 100.0 32 ............................. GCGGCAGCAAAGGCAGCGGCAAAGACCCCCTA 932026 29 100.0 32 ............................. CAACGCATCACCAGCCTATCGGACCAGGTGAA 932087 29 93.1 32 ............TG............... GTGGCTGCGGCTTCCGCCATGACCTATGATGA 932148 29 96.6 32 ..............T.............. AATTTGCAGGGTGCTACGGCAGGCTAGACACC 932209 29 96.6 32 ..............T.............. GGTGCTGCTCTCACTCGCTCAATTGGGCTTGG 932270 29 93.1 32 ..............T.............T TCGGCGGCGTCCTAGAGGTGCTAGGCGAAAAA 932331 29 93.1 32 ............TG............... GAAACCCACCGGCTGGAAAAAGACCGCCACCA 932392 29 89.7 0 ..........T.TG............... | ========== ====== ====== ====== ============================= ================================ ================== 87 29 99.4 32 GTATTCTCCGCGCACGCGGAGGTAGTTCC # Left flank : TTATCTCGCTGACGATCGTTACCGCACTCGTGACGGTTTACAACATCATTCTCTTCAGCCAGCTACAACGCGAAATCCCAAGGGAGAAAATAGGCCGCGTCATTGCGGTCGTCACCACGAGCTCCGCAGCCGTGATGCCGCTCGGGAATCTAGTTTTCTCCAAACTCTCCACCACTATACCCACACACATGCTCATTTGGGCCACAACCATCACCCTCCTAGTGACAGGGTTGGCGATAACGATTGGCAACCGAAAACGCGGGGGATCGGTTTGAATGAAGCTCAGCTGCTGGGAAAACATGCTCCCGCTAAGCGTTGAATGGCTACGAGAGGAATAAGCTTCAGTGCAATGTATTGGCGGGATTATAAAGGATCACGGGGCATGGAGGATTGTCAGTGGCAGAATTCTCACCCCACAATTCGGCTATAAATTTCAGATTCCAGAGCCAAATTTGGCCCATTTTTGAGAATCATGCTATAAAAGACCCAGCTCATTTAGG # Right flank : CAGGGTTCGTGGTTTCTTCCTGTTTTTCGTCTTGGGTACTAGAAGCTTATTCAACGTCTCCAAACATGACTAGTCTCTGTAAGTAAGGAAAGACAAGCTAGATAGCATTTTCTTTCTGATTTTCCTCCTGTTGTCGTAGATGGATTTTCCCAGTAGCTGAATAAGCTTCCTGGTGATATTACTTGGCATGATTGTCTCCTTGATTATGCGAAATGTAGGGATGGGTATAAATAAACCCCACCGGTCTGGTGGAGTTAGTCCATAGCGATAGGGAGCATGGGGCCAATCCTGGCGAGCCCTTCCGCGTTTCAAACGCACGTGAGCCAAACTCCTCAAAATCAGGCAGATTTGGGCATAAGATAACCTGTAATCTCATTACATGAAATCACAGGTGTGTTGGTGGTTAAGCTGCCAAATAGTGCACAGGGATCATAGTAGCCTTCATGTCTACCCATTCTTCCAGATGGGTTTGGATGTGCATCTTAACTACTTCCCCATCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCGCGCACGCGGAGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 1043760-1045984 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134504.1 Corynebacterium matruchotii strain NCTC10206 chromosome 1, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1043760 29 100.0 32 ............................. TGCCCGCGGTCACGGGGATCACCGGGTCGTTC 1043821 29 100.0 32 ............................. TCGCTGACGGCGGCGACCCCGGCCAGCCCCTG 1043882 29 100.0 32 ............................. CGATTGCGGGCCATATGGTGGGTTCCACCCTG 1043943 29 100.0 32 ............................. GGCGAACTCCCGCCCGGCACGCTCACCAGCTT 1044004 29 100.0 32 ............................. ATTTTTTACCGGGTTTTCGAAGGGTTTTTCCC 1044065 29 96.6 32 T............................ TCAAGAGTTTTTAATTGAAGCCGCTGCAACTC 1044126 29 100.0 32 ............................. GTAGATATACGAAAACTCGATAGTGTATCAAG 1044187 29 100.0 32 ............................. TGCGGTGTTTGCGACGACAATATTGGCAACGA 1044248 29 100.0 32 ............................. GCTATCGGCTATGCTTCTCTCCCGATCACTGT 1044309 29 100.0 32 ............................. CCAGCCACCATCGAAAGCCTGATCCGTAAAGT 1044370 29 100.0 32 ............................. CCATCACATCAAACTCTACCGACACCCGCAGC 1044431 29 100.0 32 ............................. GGCAAGCCGGAGCGCGTGTTGACTCACCAAGA 1044492 29 100.0 32 ............................. CCCCGGCGTCAAACCCCCACGCCGTGTTTTAC 1044553 29 100.0 32 ............................. ACCCCACCCGGGTAAAGCTTACCCCGCCAAAA 1044614 29 100.0 32 ............................. TTATAGGCGTTCTGAATCGCAACACCATACAC 1044675 29 100.0 32 ............................. CGGGGATCAGGGGGCTTGGGGTGCTTCTCATG 1044736 29 100.0 32 ............................. CAAAAAGAAGCTGTGGAAGAAACCACCACCGT 1044797 29 96.6 32 C............................ ATCTCGTTTATCGGAATGCTGGCCGCAATGGT 1044858 29 100.0 32 ............................. TGTGACACGCCTCACTAGCGTGGTCGTCCCCG 1044919 29 100.0 32 ............................. CTTAGACAATCCTAAGATCAACTTTAAGGACT 1044980 29 100.0 32 ............................. CAGGTTGGCGTGAACGCTTGTTCGATCCGTTT 1045041 29 100.0 32 ............................. TATCGTGTGCTAGGTGAAGGTAAATACGATCC 1045102 29 100.0 32 ............................. GGATTCGCCGGTGCCGTTCACATCAACGATCT 1045163 29 100.0 32 ............................. TCGACAACACCGCGATCTTGGACGGCGGTTCC 1045224 29 100.0 32 ............................. ATAAAGAGTTGAACACCGGGTTGAACCGTTTG 1045285 29 100.0 32 ............................. CGCGGCCGGCTGCATGACAACGTTGGACACGA 1045346 29 96.6 32 C............................ TCCACCAGATCAACCCCTACACCGGCGAGACC 1045407 29 100.0 32 ............................. CCCTGCAGCTCGGTTTTAATACTGGCTGTGGC 1045468 29 100.0 32 ............................. ATTTCAGGGACTCCCCCAACTCTACCAAACCT 1045529 29 100.0 32 ............................. ACAATCGTTTTGATCGGGTGTTGGTCAGCAAT 1045590 29 100.0 32 ............................. CCCCGGGTGTGGTGATGGACGGCATCGAGGGG 1045651 29 100.0 32 ............................. CACAATTCTTCCACGGACAAATGTTCGAAATC 1045712 29 100.0 32 ............................. AGCAGGGGTTTTACCGCTTTCACCCAATCGGG 1045773 29 100.0 32 ............................. GTGCGTTCCGCAACCTCAATCTGCTTCAGGGC 1045834 29 100.0 32 ............................. AAGGATTCGCCATCATCATGTTCACGGTGCAT 1045895 29 100.0 32 ............................. AGGTGATTTTGTCACAGTGGTTTTTCTCCTAT 1045956 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 37 29 99.7 32 GGAACTACCTCCGCGTGCGCGGAGAATAC # Left flank : GGGCGGGGAGAATACGATAGGAATATGCCATACTTGAAGAGGTAAAGTTAGTTTTATTCCTCTTGATAAGTAATAAGGTAGATCATTATGTACACCCGTGAAAATGCGCCGCTAACACCAGAACAGCGAAAACACCTGGATAACGTCTTGGCCAATTCCCGTATTGAGGGATATGAGATTACCGACCAGACCATTGATGATGCCATTAGGATAATCCTAGGGGAAAAAACCTCAGATGAAATCCGGGATGAGATCCTCCAGCGCTATGGGGTAACCCCAGAAACCACACCTGACACATGAGTGAGTACGACGACTGGAAGCAAGAAAACGACCGGTGGGAAGCCTATCTCTACCCCAATGGAGTCCTACGCAATAAACTTGGTATTACCAAAGCTGCAAAATGGCACAAAATGGAACGTGACTTCGTTACAGCTCGAAATACTGATCTTCGCCCTAATACTGGGCTTACTACGGGGAATGTTGGGGAGGAGCTTTTTGCT # Right flank : CCCTAAATGAGCTGGGTCTTTTATAGCATGATTCTCAAAAACAGGCCAAATTTCGCTCTGGAATCTGGAATTTATGGCCGAATTATGGGGTGAAGATTCCACAACTTCCAATCCCTCATGATAAAGCCTATTCAACTGATGGGAAGACGCTTCCACGCCACTCGTTAAGTGATTCCTCTTGGAAGGAAGCTTATTCAACCGCTGGGAAAACTCATCTACACCAACAGGTGGAAAATCAGAAAGAACACGTCATCTAGCCTGTCTTTCTTACTTCCAAAAGGTGGTCATGCATGTTAATGCCTCAAGAAGCTGAACCACATTTCCCTGCAACCGAATTAGCTTCGACAACCAATACATTAGCCATGGGCTTACCGCCCTAGCAGCCCAGGCCAACACCTCCCAGCCGATCGGCCCACCCTGCATGCGCGGAGAATGCTACTACCTGCACGAATCTGCCCCCACCCCGACGTCGTAAAGCATGCAAAGAACCCCAGCTCACA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAACTACCTCCGCGTGCGCGGAGAATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //