Array 1 124485-123846 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAINTK010000007.1 Escherichia coli strain R133-2 NODE_7_length_223688_cov_41.450477, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    124484	    29	 100.0	    32	.............................	TATAATTCGTGAATTTTATGGTGTTAAATAAA	
    124423	    29	 100.0	    32	.............................	CGCCTGGCTGTAATAATGCACGGCAGTGTGAC	
    124362	    29	 100.0	    32	.............................	CAAAATCCTGTCGGGAAAAAATCGACAATCAT	
    124301	    29	 100.0	    32	.............................	CGTATATGCACACTCTGCGAACATCTCCACCC	
    124240	    29	 100.0	    32	.............................	CGTGATAACAGCAGGACCAGCGCCAGCAGTGG	
    124179	    29	 100.0	    32	.............................	TGATGCGGCGTGACACACATAATCATTGTGTA	
    124118	    29	 100.0	    32	.............................	ACATTTTATTTTATGCAAAAGCGGGCAGCGAA	
    124057	    29	 100.0	    32	.............................	TTTACCTGCTCGGTGATATCGTCCTGCAAATC	
    123996	    29	 100.0	    32	.............................	CGATCTTTTCCTACCTGGTACAATCAGTAAAT	
    123935	    29	  93.1	    32	.T..........G................	GGTACAAAAGAGGCCCCATTCTGGCAGGGCTC	
    123874	    29	  89.7	     0	A...............T...........A	|                               	
==========	======	======	======	=============================	================================	==================
        11	    29	  98.4	    32	GAGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   CTGGATGAACTTTTGGCGACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACCCATAAATATTTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTCTTTGTCGTCTCTGAAAAAGCTCCATTTTGCCCATCCTGAACTAATCATTATCATTCTCTACAAATTCTGTGGCGTTAATTTTTCACTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATTGGTTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA
# Right flank :  CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTCGTAATAAGCAACATATCCACGTAACCCCTCATGTTCAAAATAGTTCCCCATGCCAGATAAGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATAATTCTTAAACCGTTAAGAAATTTTAATATATTGTTTTTTAATATTAATTAATGCCTGTTAATTTTTTCTTAAGTATAACAGTGTATTTTTTAAGCTTGTTATTCATTGATTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTTAT

# Questionable array : NO	 Score: 6.18
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GAGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.65   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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